BLASTX nr result
ID: Coptis24_contig00002854
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00002854
(1924 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300588.1| actin related protein [Populus trichocarpa] ... 624 e-176
ref|XP_004149570.1| PREDICTED: actin-related protein 8-like [Cuc... 622 e-176
ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vi... 620 e-175
ref|XP_004166773.1| PREDICTED: LOW QUALITY PROTEIN: actin-relate... 620 e-175
ref|XP_003522829.1| PREDICTED: actin-related protein 8-like [Gly... 592 e-166
>ref|XP_002300588.1| actin related protein [Populus trichocarpa]
gi|222847846|gb|EEE85393.1| actin related protein
[Populus trichocarpa]
Length = 473
Score = 624 bits (1608), Expect = e-176
Identities = 315/482 (65%), Positives = 378/482 (78%)
Frame = -2
Query: 1758 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSSERGFEGLGGTLDRIPADVFMQILKS 1579
MAMLL+KV ESV++ + F + + V S LG DR+P DV +QI++
Sbjct: 1 MAMLLKKVWESVSNRATSFSSSSID--SVTTPLSYTESSSSLGA-FDRLPIDVVLQIVRL 57
Query: 1578 VGPKEAARASLVCKSWQFLISDNRLWIFFLQNNHPEPQHWEALVFAEKHLRSGYPLFQTF 1399
VGPK+AAR S+VCKSW+ L+SDNRLWI+FLQN H W+++ F E HLRSGYP+ QTF
Sbjct: 58 VGPKDAARLSVVCKSWRPLVSDNRLWIYFLQNYHDT---WDSVFFVETHLRSGYPI-QTF 113
Query: 1398 YNQSIQLSFMQIYGQRAHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESPMY 1219
+ +LSFM+IYGQR + G+V++D A PSGRSATFLEFGNIESPMY
Sbjct: 114 SSPITELSFMRIYGQRVQVPGAVIVDGGSGHCKYGWSKNACPSGRSATFLEFGNIESPMY 173
Query: 1218 SRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNVPA 1039
SRL+HFFATIYSRMQVK S +P VVS+P+CHYDDTESA+A+RRQLK+ IY+ LFDMNVPA
Sbjct: 174 SRLQHFFATIYSRMQVKASAHPIVVSLPLCHYDDTESARASRRQLKDAIYTALFDMNVPA 233
Query: 1038 VCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGYLR 859
VCAINQATLAL+AA+R SGIVVNIGF VTSVVPIL GK+MR VGVEV+G GA+K+TG+LR
Sbjct: 234 VCAINQATLALYAAQRTSGIVVNIGFQVTSVVPILHGKIMRTVGVEVMGVGALKVTGFLR 293
Query: 858 ELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEGWFTLSKERFQTG 679
E MQ+NN+NF+SL+TV LKENLCYVA DYEAE+ KDTQASFEV GEGWFTLSKERF+TG
Sbjct: 294 EQMQQNNLNFESLHTVHTLKENLCYVAADYEAELYKDTQASFEVPGEGWFTLSKERFKTG 353
Query: 678 EILFRPRMGGVHTMALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERLEK 499
E+LF+P + GV M L QAVALCM HC A+E+T DD WFKT+VL+GG+ACLPGL ERLEK
Sbjct: 354 EVLFQPCIAGVCAMGLQQAVALCMDHCHAAELTEDDAWFKTIVLSGGTACLPGLAERLEK 413
Query: 498 ELRTFLTPSMSEGIRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRSFIT 319
EL L PS+S GIRVI P YGA+SAW GAK+I N+STF SWC+T+ QFR+KSR F
Sbjct: 414 ELHGLLPPSISNGIRVISPSYGADSAWIGAKLIGNLSTFPGSWCVTKKQFRRKSR--FTL 471
Query: 318 SW 313
+W
Sbjct: 472 AW 473
>ref|XP_004149570.1| PREDICTED: actin-related protein 8-like [Cucumis sativus]
Length = 466
Score = 622 bits (1605), Expect = e-176
Identities = 319/481 (66%), Positives = 378/481 (78%), Gaps = 2/481 (0%)
Frame = -2
Query: 1758 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSSERGFEGLG-GTLDRIPADVFMQILK 1582
MAMLLRKV SV++ S R EN S GFE G DRIP ++ MQIL+
Sbjct: 1 MAMLLRKVWGSVSTRS-RLHLEN-----------SSTGFEESSLGDFDRIPVEILMQILQ 48
Query: 1581 SVGPKEAARASLVCKSWQFLIS-DNRLWIFFLQNNHPEPQHWEALVFAEKHLRSGYPLFQ 1405
GPK A+ ++CKSW+ L+S DN LWIFFLQN + + W++++F E L SGYPL +
Sbjct: 49 LAGPKTTAKMGMLCKSWRSLVSSDNTLWIFFLQN---QLEPWDSVLFGETKLASGYPL-E 104
Query: 1404 TFYNQSIQLSFMQIYGQRAHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESP 1225
TF Q + LSFM++Y +RA + GSV+ID Y PSGRSATFLEFGNIESP
Sbjct: 105 TFSGQMMPLSFMKVYNKRAEVPGSVIIDGGSGYCKFGWSKYDGPSGRSATFLEFGNIESP 164
Query: 1224 MYSRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNV 1045
MYSRLRHFFATIYSRM+VK S YP VVS+PICHYDDTESAKA+R+QLKE IYSVLFDMNV
Sbjct: 165 MYSRLRHFFATIYSRMRVKTSFYPVVVSLPICHYDDTESAKASRQQLKEAIYSVLFDMNV 224
Query: 1044 PAVCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGY 865
P+VCAINQATLAL+AAR+ SGIVVN+GF VTS+VPIL GKVMR+VGVEV+G GA+KLTGY
Sbjct: 225 PSVCAINQATLALYAARKTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGY 284
Query: 864 LRELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEGWFTLSKERFQ 685
LRELMQ+NNI+F+S+YTVR LKENLCYVA DYEAE+ KDTQAS+E GEGWFTLSKERFQ
Sbjct: 285 LRELMQQNNIHFESMYTVRTLKENLCYVAEDYEAELTKDTQASYEAAGEGWFTLSKERFQ 344
Query: 684 TGEILFRPRMGGVHTMALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERL 505
TGEILF+PRMGGV M LH+AVALCM HC A+E++ DD WFKTVVL+GGSACLPGL ERL
Sbjct: 345 TGEILFQPRMGGVRAMGLHEAVALCMDHCHAAELSYDDSWFKTVVLSGGSACLPGLAERL 404
Query: 504 EKELRTFLTPSMSEGIRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRSF 325
+KEL L +S GIRVIPP YG ++AWFGA++ISN+STF + WC+T+ QFRQKS+ +
Sbjct: 405 QKELYGLLPSPLSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNL 464
Query: 324 I 322
I
Sbjct: 465 I 465
>ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vinifera]
gi|296090034|emb|CBI39853.3| unnamed protein product
[Vitis vinifera]
Length = 473
Score = 620 bits (1599), Expect = e-175
Identities = 314/481 (65%), Positives = 375/481 (77%)
Frame = -2
Query: 1758 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSSERGFEGLGGTLDRIPADVFMQILKS 1579
MA LLRKV ESV+ SS + +E+ RR VV SS G IP DVFM IL+
Sbjct: 1 MAALLRKVWESVSRSS-KATSESSDRR--VVVQSST-------GAFSHIPFDVFMHILQF 50
Query: 1578 VGPKEAARASLVCKSWQFLISDNRLWIFFLQNNHPEPQHWEALVFAEKHLRSGYPLFQTF 1399
+ P+E A+ SLVCK W+FL+SDN+LW++ LQ +P W++LVFAE HL+ GYPL TF
Sbjct: 51 LEPREVAKLSLVCKYWKFLVSDNQLWLYLLQKEQNQPGSWDSLVFAETHLQMGYPLL-TF 109
Query: 1398 YNQSIQLSFMQIYGQRAHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESPMY 1219
+Q QLSFM I+G+RA G+++ID Y +G SATFLEFGNIE+P+Y
Sbjct: 110 NDQMPQLSFMHIFGRRAKAPGAIIIDGGSGYCKYGWSKYDTTTGMSATFLEFGNIETPIY 169
Query: 1218 SRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNVPA 1039
SRLRHF ATIYSRM VKPS P V+S+PICHYDD ESAKA+RRQLKETI+SVLFDMNVPA
Sbjct: 170 SRLRHFLATIYSRMHVKPSAQPIVLSVPICHYDDNESAKASRRQLKETIHSVLFDMNVPA 229
Query: 1038 VCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGYLR 859
VCAINQATLAL+AA++ SGIVVNIGFH TS+VPIL GKVMR+VGVEV+G G +KLTG+LR
Sbjct: 230 VCAINQATLALYAAKQTSGIVVNIGFHCTSIVPILHGKVMRKVGVEVVGMGGLKLTGFLR 289
Query: 858 ELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEGWFTLSKERFQTG 679
E MQ+ N+NF+SLYTVR+LKENLCYVA DYEAE+ KDT+ASF+V EGWFTLS+ERFQTG
Sbjct: 290 ERMQQQNMNFESLYTVRSLKENLCYVAADYEAELSKDTRASFQVASEGWFTLSRERFQTG 349
Query: 678 EILFRPRMGGVHTMALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERLEK 499
EILF+PRM GV M LHQAVA CM HCQ++ +T D+ WFKTVVLAGGSACLPGL ERLEK
Sbjct: 350 EILFQPRMAGVTMMGLHQAVAHCMDHCQSAAITADESWFKTVVLAGGSACLPGLAERLEK 409
Query: 498 ELRTFLTPSMSEGIRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRSFIT 319
EL + PS++ GIRV+PP YG +SAWFGAKIISN+STF SWCMT+ QFR K RR+ +
Sbjct: 410 ELHGLVCPSVANGIRVLPPPYGEKSAWFGAKIISNLSTFPGSWCMTKKQFRPKVRRNLMV 469
Query: 318 S 316
+
Sbjct: 470 T 470
>ref|XP_004166773.1| PREDICTED: LOW QUALITY PROTEIN: actin-related protein 8-like [Cucumis
sativus]
Length = 466
Score = 620 bits (1598), Expect = e-175
Identities = 318/481 (66%), Positives = 377/481 (78%), Gaps = 2/481 (0%)
Frame = -2
Query: 1758 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSSERGFEGLG-GTLDRIPADVFMQILK 1582
MAMLLRKV SV++ S R EN S GFE G DRIP ++ MQIL+
Sbjct: 1 MAMLLRKVWGSVSTRS-RLHLEN-----------SSTGFEESSLGDFDRIPVEILMQILQ 48
Query: 1581 SVGPKEAARASLVCKSWQFLIS-DNRLWIFFLQNNHPEPQHWEALVFAEKHLRSGYPLFQ 1405
GPK A+ ++CKSW+ L+S DN LWI FLQN + + W++++F E L SGYPL +
Sbjct: 49 LAGPKTTAKMGMLCKSWRSLVSSDNTLWIXFLQN---QLEPWDSVLFGETKLASGYPL-E 104
Query: 1404 TFYNQSIQLSFMQIYGQRAHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESP 1225
TF Q + LSFM++Y +RA + GSV+ID Y PSGRSATFLEFGNIESP
Sbjct: 105 TFSGQMMPLSFMKVYNKRAEVPGSVIIDGGSGYCKFGWSKYDGPSGRSATFLEFGNIESP 164
Query: 1224 MYSRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNV 1045
MYSRLRHFFATIYSRM+VK S YP VVS+PICHYDDTESAKA+R+QLKE IYSVLFDMNV
Sbjct: 165 MYSRLRHFFATIYSRMRVKTSFYPVVVSLPICHYDDTESAKASRQQLKEAIYSVLFDMNV 224
Query: 1044 PAVCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGY 865
P+VCAINQATLAL+AAR+ SGIVVN+GF VTS+VPIL GKVMR+VGVEV+G GA+KLTGY
Sbjct: 225 PSVCAINQATLALYAARKTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGY 284
Query: 864 LRELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEGWFTLSKERFQ 685
LRELMQ+NNI+F+S+YTVR LKENLCYVA DYEAE+ KDTQAS+E GEGWFTLSKERFQ
Sbjct: 285 LRELMQQNNIHFESMYTVRTLKENLCYVAEDYEAELTKDTQASYEAAGEGWFTLSKERFQ 344
Query: 684 TGEILFRPRMGGVHTMALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERL 505
TGEILF+PRMGGV M LH+AVALCM HC A+E++ DD WFKTVVL+GGSACLPGL ERL
Sbjct: 345 TGEILFQPRMGGVRAMGLHEAVALCMDHCHAAELSYDDSWFKTVVLSGGSACLPGLAERL 404
Query: 504 EKELRTFLTPSMSEGIRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRSF 325
+KEL L +S GIRVIPP YG ++AWFGA++ISN+STF + WC+T+ QFRQKS+ +
Sbjct: 405 QKELYGLLPSPLSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNL 464
Query: 324 I 322
I
Sbjct: 465 I 465
>ref|XP_003522829.1| PREDICTED: actin-related protein 8-like [Glycine max]
Length = 477
Score = 592 bits (1525), Expect = e-166
Identities = 299/479 (62%), Positives = 362/479 (75%)
Frame = -2
Query: 1758 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSSERGFEGLGGTLDRIPADVFMQILKS 1579
M+MLLRKV E V S + + E +G L+ +P+D+ M IL+
Sbjct: 1 MSMLLRKVWERVLWRSDSSTSASASASSSSSSSPPEVACSDMG-ELELLPSDILMHILRL 59
Query: 1578 VGPKEAARASLVCKSWQFLISDNRLWIFFLQNNHPEPQHWEALVFAEKHLRSGYPLFQTF 1399
+GPKEAA+ S+VCK+ + L+SDNRLWI FLQ + EP +++ FAE L GYPL F
Sbjct: 60 LGPKEAAKLSVVCKALRSLVSDNRLWIHFLQTHQAEPSG-DSVFFAETTLSYGYPL-PPF 117
Query: 1398 YNQSIQLSFMQIYGQRAHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESPMY 1219
QLSF IYGQRA + GS++ID YA PSGRSATFLEFGNIESPMY
Sbjct: 118 AGHWPQLSFKHIYGQRALVPGSIIIDGGSGYCKFGWSKYAYPSGRSATFLEFGNIESPMY 177
Query: 1218 SRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNVPA 1039
+RLRHFFATIY+RMQVKP+K P +VS+PICHYDDTESAKA+R+QLKE IY+ LFDMNVPA
Sbjct: 178 TRLRHFFATIYNRMQVKPNKQPVIVSVPICHYDDTESAKASRQQLKEAIYASLFDMNVPA 237
Query: 1038 VCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGYLR 859
VCAINQATLAL+AA+R SGIVVNIGF VTS+VPIL GKVMR+VGVEV+G GA+KLTG+LR
Sbjct: 238 VCAINQATLALYAAKRTSGIVVNIGFQVTSIVPILNGKVMRKVGVEVVGLGALKLTGFLR 297
Query: 858 ELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEGWFTLSKERFQTG 679
E MQ NN++F SLYTVR LKENLCYVA+DYEAE+ KDT+ASFE GEGWFTLSK RFQT
Sbjct: 298 EKMQLNNLSFQSLYTVRTLKENLCYVALDYEAELLKDTKASFEAAGEGWFTLSKGRFQTA 357
Query: 678 EILFRPRMGGVHTMALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERLEK 499
EILF+P + GV M LHQA+ALC+ HC ++++ CD W+KT+VL+GG+ACLPGL ER+EK
Sbjct: 358 EILFQPHLAGVQAMGLHQAIALCVEHCHSADLACDSDWYKTIVLSGGTACLPGLAERIEK 417
Query: 498 ELRTFLTPSMSEGIRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRSFI 322
EL L P +S GIRVIPP YGA++ WFGAKI+ N+STF WC+T+ QFRQK R + I
Sbjct: 418 ELHALLPPYVSNGIRVIPPPYGADTPWFGAKIVGNLSTFPGHWCVTKKQFRQKPRLNLI 476