BLASTX nr result

ID: Coptis24_contig00002599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002599
         (1437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265230.1| PREDICTED: uncharacterized protein LOC100260...   268   3e-69
emb|CBI40568.3| unnamed protein product [Vitis vinifera]              252   1e-64
ref|XP_002272343.1| PREDICTED: uncharacterized protein LOC100243...   245   2e-62
emb|CBI23023.3| unnamed protein product [Vitis vinifera]              242   2e-61
ref|XP_002523322.1| conserved hypothetical protein [Ricinus comm...   234   3e-59

>ref|XP_002265230.1| PREDICTED: uncharacterized protein LOC100260339 [Vitis vinifera]
          Length = 478

 Score =  268 bits (684), Expect = 3e-69
 Identities = 157/339 (46%), Positives = 201/339 (59%), Gaps = 7/339 (2%)
 Frame = -2

Query: 1343 ATCMKNYSETIVQEPSVVDCDSTQKTLPQKNTGEYWCRDKESMDVDPVEQYMSKQPEKLF 1164
            A C++   +   QE + +D  + Q  L   N  +Y+    E ++ +P+    SKQP +L+
Sbjct: 149  AGCVEKDPDFGKQEVNALDSKNAQD-LEVNNMWKYY----ELVETEPIGSSASKQPSELY 203

Query: 1163 -DMESPWMGGEKTEPWWRTADKDELASLVAQKSLEHVENCDLPPPQIIHIRKGPFASHES 987
             D ES W+G EK EPWWRTAD DELASLV QKSL+H+ENCDLPPPQ +H+R  PFA   S
Sbjct: 204  LDSESSWIGVEKNEPWWRTADTDELASLVVQKSLDHIENCDLPPPQKMHVRSDPFAPLGS 263

Query: 986  FNQDGTF-SSFERKKLTGLCSSVD-HSRCCITCGGENRKHRGSDEKDLSYGFDKPFS-SD 816
            F   G F SS +RK  TG  S++  H +   + G  + +   S E    +G DKPFS + 
Sbjct: 264  FVHKGNFGSSLDRKAQTGTLSNLTLHLKGSSSLGSADGRQWASAED--RHGSDKPFSYNT 321

Query: 815  NHGKYSKDPTDTSNTSESEPSKAELMDALRHSQTRAREAENAAQKAYDEKEHIIKLLFRQ 636
            NH    KD T+    ++++PSKA+L++ALRHSQTRAREAE AA++A++EKEHII L  RQ
Sbjct: 322  NH----KDLTEMQGITDNDPSKAQLLEALRHSQTRAREAEKAAKQAHEEKEHIISLFLRQ 377

Query: 635  ASHLFAYKQWLQLLQLETFYLQLKNKDQSISTLFPVFLPWTPY---XXXXXXXXXXXXXX 465
            AS LFAYKQW  LLQLE  Y Q+KNKD  ISTLFPV LPWTPY                 
Sbjct: 378  ASQLFAYKQWFHLLQLENLYSQIKNKDHPISTLFPVTLPWTPYKAKKQRKSWQKATKGRR 437

Query: 464  XXXXXXRYDIGRYXXXXXXXXXXXXXXXXXGWTMGWLFP 348
                  RYDI +Y                 GWT+GW+ P
Sbjct: 438  GKRAQPRYDISKYAVAFALGLSLVGAGLLLGWTIGWMLP 476


>emb|CBI40568.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  252 bits (644), Expect = 1e-64
 Identities = 143/289 (49%), Positives = 175/289 (60%), Gaps = 10/289 (3%)
 Frame = -2

Query: 1184 KQPEKLFDM----ESPWMGGEKTEPWWRTADKDELASLVAQKSLEHVENCDLPPPQIIHI 1017
            K  E  FD+    +S W+G EK EPWWRTAD DELASLV QKSL+H+ENCDLPPPQ +H+
Sbjct: 135  KNTESFFDLTTCGKSSWIGVEKNEPWWRTADTDELASLVVQKSLDHIENCDLPPPQKMHV 194

Query: 1016 RKGPFASHESFNQDGTF-SSFERKKLTGLCSSVD-HSRCCITCGGENRKHRGSDEKDLSY 843
            R  PFA   SF   G F SS +RK  TG  S++  H +   + G  + +   S E    +
Sbjct: 195  RSDPFAPLGSFVHKGNFGSSLDRKAQTGTLSNLTLHLKGSSSLGSADGRQWASAED--RH 252

Query: 842  GFDKPFS-SDNHGKYSKDPTDTSNTSESEPSKAELMDALRHSQTRAREAENAAQKAYDEK 666
            G DKPFS + NH    KD T+    ++++PSKA+L++ALRHSQTRAREAE AA++A++EK
Sbjct: 253  GSDKPFSYNTNH----KDLTEMQGITDNDPSKAQLLEALRHSQTRAREAEKAAKQAHEEK 308

Query: 665  EHIIKLLFRQASHLFAYKQWLQLLQLETFYLQLKNKDQSISTLFPVFLPWTPY---XXXX 495
            EHII L  RQAS LFAYKQW  LLQLE  Y Q+KNKD  ISTLFPV LPWTPY       
Sbjct: 309  EHIISLFLRQASQLFAYKQWFHLLQLENLYSQIKNKDHPISTLFPVTLPWTPYKAKKQRK 368

Query: 494  XXXXXXXXXXXXXXXXRYDIGRYXXXXXXXXXXXXXXXXXGWTMGWLFP 348
                            RYDI +Y                 GWT+GW+ P
Sbjct: 369  SWQKATKGRRGKRAQPRYDISKYAVAFALGLSLVGAGLLLGWTIGWMLP 417


>ref|XP_002272343.1| PREDICTED: uncharacterized protein LOC100243561 [Vitis vinifera]
          Length = 494

 Score =  245 bits (625), Expect = 2e-62
 Identities = 157/373 (42%), Positives = 200/373 (53%), Gaps = 15/373 (4%)
 Frame = -2

Query: 1421 VREEVISGIS----TERNALSSLVLQRRMSATCMKNYSETIVQEPSVVDCDSTQKTLPQK 1254
            + +  I G+     T++NA   L   R+ SA  MK      + +P +    + Q     K
Sbjct: 112  INQTAIEGLGAQTETKKNADFFLDRSRKASAASMKEDQFARMSKPKIGLHSNPQDIGKDK 171

Query: 1253 NTGEYWCRDKESMDVDPVEQYMSKQPEKLF-DMESPWMGGEKTEPWWRTADKDELASLVA 1077
            +  E W  D+   D+DPV   +S+Q +KL  D+ES WMG EKTEPWWR ADKD LAS+VA
Sbjct: 172  DIEELWYTDE---DLDPVNSLVSEQSKKLSSDLESHWMGAEKTEPWWRKADKDTLASMVA 228

Query: 1076 QKSLEHVENCDLPPPQIIHIRKGPFASHESFNQDGTFS-SFERKKLTGLCSSVDHSRCCI 900
            QKS+EH+ENCDLP PQI H R+G  AS E  +QD   + S ++    G  +  D      
Sbjct: 229  QKSVEHIENCDLPKPQIKHFRRGLSASLEWSDQDWMVAPSLDQMAELGFSNLTD------ 282

Query: 899  TCGGENRKHRGSDEKDLSYGF--------DKPFSSDNHGKYSKDPTDTSNTSESEPSKAE 744
             C  ++      DEK  S G         D  F +++H     D  +T +  E + SKA+
Sbjct: 283  -CTWKSHTSASIDEKQSSLGAIEYSPNRSDTLFRNNSHSITGTDQEETCHIPE-DASKAQ 340

Query: 743  LMDALRHSQTRAREAENAAQKAYDEKEHIIKLLFRQASHLFAYKQWLQLLQLETFYLQLK 564
            L++AL HSQTRAREAE AAQ+AY+EKEHIIKL F+QAS LFAYKQWLQLLQLET  L+ K
Sbjct: 341  LVEALCHSQTRAREAEKAAQQAYEEKEHIIKLFFKQASQLFAYKQWLQLLQLETLCLEPK 400

Query: 563  NKDQSISTLFPVFLPWTPYXXXXXXXXXXXXXXXXXXXXRYDIGRY-XXXXXXXXXXXXX 387
            NKDQ IS+  P  LPW PY                         RY              
Sbjct: 401  NKDQPISSHAPTVLPWIPYIAQKPRKGQHNGSKKGSTTNGNGRSRYTTVAFALGLGLAGA 460

Query: 386  XXXXGWTMGWLFP 348
                GWT+GWLFP
Sbjct: 461  GLLLGWTLGWLFP 473


>emb|CBI23023.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  242 bits (618), Expect = 2e-61
 Identities = 147/319 (46%), Positives = 189/319 (59%), Gaps = 14/319 (4%)
 Frame = -2

Query: 1421 VREEVISGIS----TERNALSSLVLQRRMSATCMKNYSETIVQEPSVVDCDSTQKTLPQK 1254
            + +  I G+     T++NA   L   R+ SA  MK      + +P +    + Q     K
Sbjct: 51   INQTAIEGLGAQTETKKNADFFLDRSRKASAASMKEDQFARMSKPKIGLHSNPQDIGKDK 110

Query: 1253 NTGEYWCRDKESMDVDPVEQYMSKQPEKLF-DMESPWMGGEKTEPWWRTADKDELASLVA 1077
            +  E W  D+   D+DPV   +S+Q +KL  D+ES WMG EKTEPWWR ADKD LAS+VA
Sbjct: 111  DIEELWYTDE---DLDPVNSLVSEQSKKLSSDLESHWMGAEKTEPWWRKADKDTLASMVA 167

Query: 1076 QKSLEHVENCDLPPPQIIHIRKGPFASHESFNQDGTFS-SFERKKLTGLCSSVDHSRCCI 900
            QKS+EH+ENCDLP PQI H R+G  AS E  +QD   + S ++    G  +  D      
Sbjct: 168  QKSVEHIENCDLPKPQIKHFRRGLSASLEWSDQDWMVAPSLDQMAELGFSNLTD------ 221

Query: 899  TCGGENRKHRGSDEKDLSYGF--------DKPFSSDNHGKYSKDPTDTSNTSESEPSKAE 744
             C  ++      DEK  S G         D  F +++H     D  +T +  E + SKA+
Sbjct: 222  -CTWKSHTSASIDEKQSSLGAIEYSPNRSDTLFRNNSHSITGTDQEETCHIPE-DASKAQ 279

Query: 743  LMDALRHSQTRAREAENAAQKAYDEKEHIIKLLFRQASHLFAYKQWLQLLQLETFYLQLK 564
            L++AL HSQTRAREAE AAQ+AY+EKEHIIKL F+QAS LFAYKQWLQLLQLET  L+ K
Sbjct: 280  LVEALCHSQTRAREAEKAAQQAYEEKEHIIKLFFKQASQLFAYKQWLQLLQLETLCLEPK 339

Query: 563  NKDQSISTLFPVFLPWTPY 507
            NKDQ IS+  P  LPW PY
Sbjct: 340  NKDQPISSHAPTVLPWIPY 358


>ref|XP_002523322.1| conserved hypothetical protein [Ricinus communis]
            gi|223537410|gb|EEF39038.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 481

 Score =  234 bits (598), Expect = 3e-59
 Identities = 137/327 (41%), Positives = 185/327 (56%), Gaps = 6/327 (1%)
 Frame = -2

Query: 1307 QEPSVVDCDSTQKTLPQKNTGEYWCRDKESMDVDPVEQYM-SKQPEKLFDMESPWMGGEK 1131
            QE  V+   + Q+ +  K+T E    + + MD+DP E     K  +  FD ESP+ G EK
Sbjct: 162  QEAGVLYDKNAQEFIEPKDTKE----NSKLMDLDPFECLRPQKSDDYCFDSESPFSGSEK 217

Query: 1130 TEPWWRTADKDELASLVAQKSLEHVENCDLPPPQIIHIRKGPFASHESFNQDGTFS-SFE 954
            + PWWRT DKD+LASLVAQKS++++ NCDLPPPQ +H+R+ P     + + D + + S +
Sbjct: 218  SVPWWRTTDKDDLASLVAQKSVDYIANCDLPPPQKLHLRRYPHGRPGASDHDDSIALSLD 277

Query: 953  RKKLTGLCSS-VDHSRCCITCGGENRKHRGSDEKDLSYGFDKPFSSDNHGKYSKDPTDTS 777
             K  +G  SS + H+  C +    + +HR S E  L  G +KPFSS       K+  +  
Sbjct: 278  GKAQSGCISSPLVHAHGCPSSESMHGRHRASVEGHLQSGLNKPFSSI---ATHKEMIEIG 334

Query: 776  NTSESEPSKAELMDALRHSQTRAREAENAAQKAYDEKEHIIKLLFRQASHLFAYKQWLQL 597
               E +P KA+L++ALRHSQTRAREAE  A++A  E+EHIIKL FRQAS LFAYKQW  L
Sbjct: 335  QVPEGDPCKAQLLEALRHSQTRAREAEKVAKQACAEREHIIKLFFRQASQLFAYKQWFHL 394

Query: 596  LQLETFYLQLKNKDQSISTLFPVFLPWTPY---XXXXXXXXXXXXXXXXXXXXRYDIGRY 426
            LQLE+ Y Q+KN  Q +STLFPV LPW P                         +DI +Y
Sbjct: 395  LQLESLYYQVKNGGQPMSTLFPVALPWMPQKGRKMRKSWQKSTRGKRGKRGRPSHDISKY 454

Query: 425  XXXXXXXXXXXXXXXXXGWTMGWLFPM 345
                             GWT+GW+ P+
Sbjct: 455  AVALALGLGLVGAGLLLGWTVGWMLPI 481


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