BLASTX nr result
ID: Coptis24_contig00002594
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00002594
(1279 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281919.1| PREDICTED: ornithine carbamoyltransferase, c... 566 e-159
gb|ABK93198.1| unknown [Populus trichocarpa] 565 e-158
ref|XP_004147858.1| PREDICTED: ornithine carbamoyltransferase, c... 563 e-158
ref|XP_002510416.1| ornithine carbamoyltransferase, putative [Ri... 563 e-158
ref|XP_004154848.1| PREDICTED: ornithine carbamoyltransferase, c... 561 e-157
>ref|XP_002281919.1| PREDICTED: ornithine carbamoyltransferase, chloroplastic [Vitis
vinifera] gi|302142520|emb|CBI19723.3| unnamed protein
product [Vitis vinifera]
Length = 378
Score = 567 bits (1460), Expect = e-159
Identities = 278/331 (83%), Positives = 304/331 (91%), Gaps = 4/331 (1%)
Frame = +2
Query: 134 TFNSPISCHASAG----SLVNGKVKADLKDFIHISDFDKDTIVKILDRAAEVKALLKSGD 301
T ISC S+ S VN K K+ LKDF+HI+DFDK TI+KILDRA EVKALLKSG+
Sbjct: 48 TLRRRISCQTSSAISPSSAVNVKEKSGLKDFLHINDFDKTTILKILDRALEVKALLKSGE 107
Query: 302 RTYQPFKGKSMAMIFAKPSLRTKVSFETGFFLLGGHAIYLGPDDIQMGKREETRDVARVL 481
RT+ PFKGK+MAMIFAKPS+RT+VSFETGFFLLGGHA+YLGPDDIQMGKREETRDVARVL
Sbjct: 108 RTFLPFKGKTMAMIFAKPSMRTRVSFETGFFLLGGHALYLGPDDIQMGKREETRDVARVL 167
Query: 482 SGYNDIIMARLFAHQDILDLAKYASVPVVNGLTDYNHPCQIMADALTIIEHVGRLEGTKV 661
S YNDIIMAR+FAHQDILDLAKYA+VPV+NGLTDYNHPCQIMADALTIIEH+G+LEGTKV
Sbjct: 168 SCYNDIIMARVFAHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHIGQLEGTKV 227
Query: 662 VYVGDGNNIVHSWLLLASVLPFHFVCACPKGFEPDEKTVEKARSSGVSKIEITNDPKEAV 841
VYVGDGNNIVHSWLLLA+V+PFHFVCACPKGFEPDEKTV+KA+ +G+SKIEITNDPKEAV
Sbjct: 228 VYVGDGNNIVHSWLLLAAVVPFHFVCACPKGFEPDEKTVQKAQQAGISKIEITNDPKEAV 287
Query: 842 RGADVVYSDVWASMGQKGEAEYRRQVFQGFQINEDLMKQAGSKAYFMHCLPAERGVEVTD 1021
RGADVVYSDVWASMGQK EA YRRQVFQGFQ++E LMK AG KAYFMHCLPAERGVEVTD
Sbjct: 288 RGADVVYSDVWASMGQKEEASYRRQVFQGFQVDEPLMKLAGPKAYFMHCLPAERGVEVTD 347
Query: 1022 GVIEAPNSIVFSQAENRMHAQNAIMLHLFGL 1114
GV+EAPNSIVF QAENRMHAQNAIMLH+ GL
Sbjct: 348 GVLEAPNSIVFPQAENRMHAQNAIMLHVLGL 378
>gb|ABK93198.1| unknown [Populus trichocarpa]
Length = 378
Score = 565 bits (1455), Expect = e-158
Identities = 281/344 (81%), Positives = 309/344 (89%), Gaps = 8/344 (2%)
Frame = +2
Query: 107 SVHFPSKLSTFNSPISCHASAGSL--------VNGKVKADLKDFIHISDFDKDTIVKILD 262
+V PS+ S ISC S+ S VNG KA ++DF+HISDFDK TI+KILD
Sbjct: 37 AVSVPSRAS--RGRISCQISSSSATSPPPPSSVNGPAKAGMEDFLHISDFDKATIMKILD 94
Query: 263 RAAEVKALLKSGDRTYQPFKGKSMAMIFAKPSLRTKVSFETGFFLLGGHAIYLGPDDIQM 442
RAAEVKA++KSGDRT+ PFKGK+MAMIFAKPS+RT+VSFETGFFLLGGHAIYLGPDDIQM
Sbjct: 95 RAAEVKAVIKSGDRTFLPFKGKTMAMIFAKPSMRTRVSFETGFFLLGGHAIYLGPDDIQM 154
Query: 443 GKREETRDVARVLSGYNDIIMARLFAHQDILDLAKYASVPVVNGLTDYNHPCQIMADALT 622
GKREETRDVARVLS YNDIIMAR+FAHQDILDLAK+A+VPV+NGLTDYNHPCQIMADALT
Sbjct: 155 GKREETRDVARVLSRYNDIIMARVFAHQDILDLAKHATVPVINGLTDYNHPCQIMADALT 214
Query: 623 IIEHVGRLEGTKVVYVGDGNNIVHSWLLLASVLPFHFVCACPKGFEPDEKTVEKARSSGV 802
IIEHVGRLEGTKVVYVGDGNNIVHSWLLLA+V+PFHFVCACPKGFEPD KTV+KA+ +G+
Sbjct: 215 IIEHVGRLEGTKVVYVGDGNNIVHSWLLLAAVIPFHFVCACPKGFEPDAKTVQKAQQAGI 274
Query: 803 SKIEITNDPKEAVRGADVVYSDVWASMGQKGEAEYRRQVFQGFQINEDLMKQAGSKAYFM 982
SKIEITNDP+EAVRGADVVYSDVWASMGQK EA +RRQVFQGFQ++E+LMK AG KAYFM
Sbjct: 275 SKIEITNDPQEAVRGADVVYSDVWASMGQKEEAAHRRQVFQGFQVDENLMKLAGPKAYFM 334
Query: 983 HCLPAERGVEVTDGVIEAPNSIVFSQAENRMHAQNAIMLHLFGL 1114
HCLPAERGVEVTDGVIEAPNSIVF QAENRMHAQNAIMLH GL
Sbjct: 335 HCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQNAIMLHALGL 378
>ref|XP_004147858.1| PREDICTED: ornithine carbamoyltransferase, chloroplastic-like
[Cucumis sativus]
Length = 378
Score = 563 bits (1451), Expect = e-158
Identities = 273/334 (81%), Positives = 304/334 (91%), Gaps = 2/334 (0%)
Frame = +2
Query: 119 PSKLSTFNSPISCHASAGS--LVNGKVKADLKDFIHISDFDKDTIVKILDRAAEVKALLK 292
PS+ ISCHASA S + KVK + KDF+H+SDFDK T++KILDRA EVKA LK
Sbjct: 45 PSRFPLPFPSISCHASATSPPSLQSKVKTEKKDFLHLSDFDKSTLLKILDRAVEVKAQLK 104
Query: 293 SGDRTYQPFKGKSMAMIFAKPSLRTKVSFETGFFLLGGHAIYLGPDDIQMGKREETRDVA 472
SGDR++ PFKGK+MAMIFAKPS+RT+VSFETGFFLLGGHAIYLGPD IQMGKREETRD+A
Sbjct: 105 SGDRSFLPFKGKTMAMIFAKPSMRTRVSFETGFFLLGGHAIYLGPDTIQMGKREETRDIA 164
Query: 473 RVLSGYNDIIMARLFAHQDILDLAKYASVPVVNGLTDYNHPCQIMADALTIIEHVGRLEG 652
RVLS YND+IMAR+F HQDILDLAKY++VPV+NGLTDYNHPCQ+MADALT+IEH+G+LEG
Sbjct: 165 RVLSRYNDVIMARVFGHQDILDLAKYSTVPVINGLTDYNHPCQVMADALTMIEHIGKLEG 224
Query: 653 TKVVYVGDGNNIVHSWLLLASVLPFHFVCACPKGFEPDEKTVEKARSSGVSKIEITNDPK 832
TKVVYVGDGNN+VHSWLLLASV+P HFVCACPKGFEPD+ TVEKAR +GVSKIEITNDPK
Sbjct: 225 TKVVYVGDGNNMVHSWLLLASVVPLHFVCACPKGFEPDKNTVEKARQAGVSKIEITNDPK 284
Query: 833 EAVRGADVVYSDVWASMGQKGEAEYRRQVFQGFQINEDLMKQAGSKAYFMHCLPAERGVE 1012
EAV+GADVVYSDVWASMGQK EA+YRRQVFQGFQ+NE+LM AGSKAYFMHCLPAERGVE
Sbjct: 285 EAVKGADVVYSDVWASMGQKEEADYRRQVFQGFQVNEELMNLAGSKAYFMHCLPAERGVE 344
Query: 1013 VTDGVIEAPNSIVFSQAENRMHAQNAIMLHLFGL 1114
VTDGVIEAPNSIVF QAENRMHAQNAIMLH+ GL
Sbjct: 345 VTDGVIEAPNSIVFPQAENRMHAQNAIMLHVLGL 378
>ref|XP_002510416.1| ornithine carbamoyltransferase, putative [Ricinus communis]
gi|223551117|gb|EEF52603.1| ornithine
carbamoyltransferase, putative [Ricinus communis]
Length = 378
Score = 563 bits (1450), Expect = e-158
Identities = 273/321 (85%), Positives = 300/321 (93%)
Frame = +2
Query: 152 SCHASAGSLVNGKVKADLKDFIHISDFDKDTIVKILDRAAEVKALLKSGDRTYQPFKGKS 331
S +S S VNGK K +LKDF+HISDFDK TI+KILDRAAEVKALLKSGDR++ PFKGK+
Sbjct: 58 SATSSPSSSVNGKAKTELKDFVHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKT 117
Query: 332 MAMIFAKPSLRTKVSFETGFFLLGGHAIYLGPDDIQMGKREETRDVARVLSGYNDIIMAR 511
MAMIFAKPS+RT+VSFETGFFLLGGHAIYLGPDDIQMGKREET DVARVLS YND+IMAR
Sbjct: 118 MAMIFAKPSMRTRVSFETGFFLLGGHAIYLGPDDIQMGKREETCDVARVLSRYNDMIMAR 177
Query: 512 LFAHQDILDLAKYASVPVVNGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIV 691
+F+HQDILDLAKYA+VPVVNGLTDYNHPCQIMADALTIIEH+G+LEGTKVVYVGDGNNIV
Sbjct: 178 VFSHQDILDLAKYATVPVVNGLTDYNHPCQIMADALTIIEHIGQLEGTKVVYVGDGNNIV 237
Query: 692 HSWLLLASVLPFHFVCACPKGFEPDEKTVEKARSSGVSKIEITNDPKEAVRGADVVYSDV 871
HSWLLLASV+PFHF+C CPKGFEPD +TV+KA+ +G+SKIEITNDPKEAVRGADVVYSDV
Sbjct: 238 HSWLLLASVIPFHFICVCPKGFEPDAETVKKAQEAGISKIEITNDPKEAVRGADVVYSDV 297
Query: 872 WASMGQKGEAEYRRQVFQGFQINEDLMKQAGSKAYFMHCLPAERGVEVTDGVIEAPNSIV 1051
WASMGQK EA +RR+ FQGFQ++EDLMK AG KAYFMHCLPAERGVEVTDGVIEAPNSIV
Sbjct: 298 WASMGQKEEAAHRRKAFQGFQVDEDLMKLAGPKAYFMHCLPAERGVEVTDGVIEAPNSIV 357
Query: 1052 FSQAENRMHAQNAIMLHLFGL 1114
F QAENRMHAQNAIMLH+ GL
Sbjct: 358 FPQAENRMHAQNAIMLHVLGL 378
>ref|XP_004154848.1| PREDICTED: ornithine carbamoyltransferase, chloroplastic-like
[Cucumis sativus]
Length = 378
Score = 561 bits (1445), Expect = e-157
Identities = 272/334 (81%), Positives = 304/334 (91%), Gaps = 2/334 (0%)
Frame = +2
Query: 119 PSKLSTFNSPISCHASAGS--LVNGKVKADLKDFIHISDFDKDTIVKILDRAAEVKALLK 292
PS+ ISCHASA S + KVK + KDF+H+SDFDK T++KILDRA EVKA LK
Sbjct: 45 PSRFPLPFPSISCHASATSPPSLQSKVKTEKKDFLHLSDFDKSTLLKILDRAVEVKAQLK 104
Query: 293 SGDRTYQPFKGKSMAMIFAKPSLRTKVSFETGFFLLGGHAIYLGPDDIQMGKREETRDVA 472
SGDR++ PFKGK+MAMIFAKPS+RT+VSFETGFFLLGGHAIYLGPD IQMGKREETRD+A
Sbjct: 105 SGDRSFLPFKGKTMAMIFAKPSMRTRVSFETGFFLLGGHAIYLGPDTIQMGKREETRDIA 164
Query: 473 RVLSGYNDIIMARLFAHQDILDLAKYASVPVVNGLTDYNHPCQIMADALTIIEHVGRLEG 652
RVLS YND+IMAR+F HQDILDLAKY++VPV+NGLTDYNHPCQ+MADALT+IE++G+LEG
Sbjct: 165 RVLSRYNDVIMARVFGHQDILDLAKYSTVPVINGLTDYNHPCQVMADALTMIEYIGKLEG 224
Query: 653 TKVVYVGDGNNIVHSWLLLASVLPFHFVCACPKGFEPDEKTVEKARSSGVSKIEITNDPK 832
TKVVYVGDGNN+VHSWLLLASV+P HFVCACPKGFEPD+ TVEKAR +GVSKIEITNDPK
Sbjct: 225 TKVVYVGDGNNMVHSWLLLASVVPLHFVCACPKGFEPDKNTVEKARQAGVSKIEITNDPK 284
Query: 833 EAVRGADVVYSDVWASMGQKGEAEYRRQVFQGFQINEDLMKQAGSKAYFMHCLPAERGVE 1012
EAV+GADVVYSDVWASMGQK EA+YRRQVFQGFQ+NE+LM AGSKAYFMHCLPAERGVE
Sbjct: 285 EAVKGADVVYSDVWASMGQKEEADYRRQVFQGFQVNEELMNLAGSKAYFMHCLPAERGVE 344
Query: 1013 VTDGVIEAPNSIVFSQAENRMHAQNAIMLHLFGL 1114
VTDGVIEAPNSIVF QAENRMHAQNAIMLH+ GL
Sbjct: 345 VTDGVIEAPNSIVFPQAENRMHAQNAIMLHVLGL 378