BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002592
         (3864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding prot...   407   0.0  
emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]   401   0.0  
ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding prot...   396   0.0  
emb|CBI18226.3| unnamed protein product [Vitis vinifera]              395   0.0  
gb|ACI43571.1| RBP50 [Cucurbita maxima]                               379   0.0  

>ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
            isoform 1 [Vitis vinifera]
          Length = 448

 Score =  407 bits (1045), Expect(2) = 0.0
 Identities = 206/236 (87%), Positives = 217/236 (91%), Gaps = 1/236 (0%)
 Frame = -1

Query: 1650 MIEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 1471
            M EPSKVIH+RNVG EISENDLLQLV  FGVVTKLVMLRAKNQALLQM D+ SAVSA+QY
Sbjct: 1    MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 1470 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 1291
            Y +VQPSVRGRNVY+QFSSHQELTTMDQN+ GR G DQD QPNRILLVTIHHLLYPITVE
Sbjct: 61   YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKG-DQDAQPNRILLVTIHHLLYPITVE 119

Query: 1290 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 1111
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV+A  +LQGRNIYDGCCQLDIQFS
Sbjct: 120  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFS 179

Query: 1110 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGDAGSLYPLQPAGAR-VAFPQ 946
            NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYGD G +Y LQP GAR VAFPQ
Sbjct: 180  NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGARPVAFPQ 235



 Score =  339 bits (870), Expect(2) = 0.0
 Identities = 168/214 (78%), Positives = 184/214 (85%)
 Frame = -3

Query: 877 QMGNXXXXXXAFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLL 698
           QMGN      AF GGLPPGISGTN++CTVLVSNLN D IDEDKLFNLFS+YGNIVR+KLL
Sbjct: 235 QMGNATAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLL 294

Query: 697 RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNR 518
           R+KPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT   DTH+Y NSNLNR
Sbjct: 295 RSKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNR 354

Query: 517 FNRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXEHGSIVNTKLFEVNAKKQALIL 338
           FNRNA+KNYRYCCSPTKMIH+S+LPQD           +HGSIVNTKLFE N KKQAL+L
Sbjct: 355 FNRNAAKNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVL 414

Query: 337 FETEEQATEALVCKHATTIDRSVIRISFSQLQSI 236
           FETEEQATEALVCKHA+ ID S IRISFSQLQ+I
Sbjct: 415 FETEEQATEALVCKHASLIDGSTIRISFSQLQAI 448


>emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
          Length = 476

 Score =  401 bits (1031), Expect(2) = 0.0
 Identities = 201/230 (87%), Positives = 212/230 (92%)
 Frame = -1

Query: 1650 MIEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 1471
            M EPSKVIH+RNVG EISENDLLQLV  FGVVTKLVMLRAKNQALLQM D+ SAVSA+QY
Sbjct: 1    MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 1470 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 1291
            Y +VQPSVRGRNVY+QFSSHQELTTMDQN+ GR G DQD QPNRILLVTIHHLLYPITVE
Sbjct: 61   YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKG-DQDAQPNRILLVTIHHLLYPITVE 119

Query: 1290 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 1111
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV+A  +LQGRNIYDGCCQLDIQFS
Sbjct: 120  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFS 179

Query: 1110 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGDAGSLYPLQPAGAR 961
            NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYGD G +Y LQP GAR
Sbjct: 180  NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGAR 229



 Score =  337 bits (865), Expect(2) = 0.0
 Identities = 167/213 (78%), Positives = 183/213 (85%)
 Frame = -3

Query: 874 MGNXXXXXXAFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLR 695
           MGN      AF GGLPPGISGTN++CTVLVSNLN D IDEDKLFNLFS+YGNIVR+KLLR
Sbjct: 264 MGNATAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLR 323

Query: 694 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRF 515
           +KPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT   DTH+Y NSNLNRF
Sbjct: 324 SKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRF 383

Query: 514 NRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXEHGSIVNTKLFEVNAKKQALILF 335
           NRNA+KNYRYCCSPTKMIH+S+LPQD           +HGSIVNTKLFE N KKQAL+LF
Sbjct: 384 NRNAAKNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLF 443

Query: 334 ETEEQATEALVCKHATTIDRSVIRISFSQLQSI 236
           ETEEQATEALVCKHA+ ID S IRISFSQLQ+I
Sbjct: 444 ETEEQATEALVCKHASLIDGSTIRISFSQLQAI 476


>ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
            [Vitis vinifera]
          Length = 445

 Score =  396 bits (1018), Expect(2) = 0.0
 Identities = 198/235 (84%), Positives = 211/235 (89%)
 Frame = -1

Query: 1650 MIEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 1471
            M EPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQALLQM D+ SA +AMQ+
Sbjct: 1    MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 1470 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 1291
            YT+VQPS+RGRNVY+QFSSHQELTT+DQN  GR  GD+   PNRILLVTIHHLLYPITVE
Sbjct: 61   YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGR--GDE-VSPNRILLVTIHHLLYPITVE 117

Query: 1290 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 1111
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV AR SLQGRNIYDGCCQLDIQFS
Sbjct: 118  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 177

Query: 1110 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGDAGSLYPLQPAGARVAFPQ 946
            NL ELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYGDAG +Y LQP    V FPQ
Sbjct: 178  NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGARTVGFPQ 232



 Score =  335 bits (858), Expect(2) = 0.0
 Identities = 167/214 (78%), Positives = 183/214 (85%)
 Frame = -3

Query: 877 QMGNXXXXXXAFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLL 698
           QM N      AF GGLPPGISGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNIVR+KLL
Sbjct: 232 QMPNASAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLL 291

Query: 697 RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNR 518
           RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT GADTHEY+NS+LNR
Sbjct: 292 RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNR 351

Query: 517 FNRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXEHGSIVNTKLFEVNAKKQALIL 338
           FNRNA+KNYRYCCSPTKMIH+S+L QD           EHG+IVNTKLFE+N KKQAL++
Sbjct: 352 FNRNAAKNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVM 411

Query: 337 FETEEQATEALVCKHATTIDRSVIRISFSQLQSI 236
           FE EEQATEALVCKHAT +    IRISFSQLQ I
Sbjct: 412 FENEEQATEALVCKHATPLGGLAIRISFSQLQGI 445


>emb|CBI18226.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  395 bits (1016), Expect(2) = 0.0
 Identities = 198/235 (84%), Positives = 211/235 (89%)
 Frame = -1

Query: 1650 MIEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 1471
            M EPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQALLQM D+ SA +AMQ+
Sbjct: 1    MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 1470 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 1291
            YT+VQPS+RGRNVY+QFSSHQELTT+DQN  GR  GD+   PNRILLVTIHHLLYPITVE
Sbjct: 61   YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGR--GDE---PNRILLVTIHHLLYPITVE 115

Query: 1290 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 1111
            VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV AR SLQGRNIYDGCCQLDIQFS
Sbjct: 116  VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 175

Query: 1110 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGDAGSLYPLQPAGARVAFPQ 946
            NL ELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYGDAG +Y LQP    V FPQ
Sbjct: 176  NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGARTVGFPQ 230



 Score =  335 bits (858), Expect(2) = 0.0
 Identities = 167/214 (78%), Positives = 183/214 (85%)
 Frame = -3

Query: 877 QMGNXXXXXXAFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLL 698
           QM N      AF GGLPPGISGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNIVR+KLL
Sbjct: 230 QMPNASAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLL 289

Query: 697 RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNR 518
           RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT GADTHEY+NS+LNR
Sbjct: 290 RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNR 349

Query: 517 FNRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXEHGSIVNTKLFEVNAKKQALIL 338
           FNRNA+KNYRYCCSPTKMIH+S+L QD           EHG+IVNTKLFE+N KKQAL++
Sbjct: 350 FNRNAAKNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVM 409

Query: 337 FETEEQATEALVCKHATTIDRSVIRISFSQLQSI 236
           FE EEQATEALVCKHAT +    IRISFSQLQ I
Sbjct: 410 FENEEQATEALVCKHATPLGGLAIRISFSQLQGI 443


>gb|ACI43571.1| RBP50 [Cucurbita maxima]
          Length = 445

 Score =  379 bits (974), Expect(2) = 0.0
 Identities = 192/237 (81%), Positives = 211/237 (89%), Gaps = 2/237 (0%)
 Frame = -1

Query: 1650 MIEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 1471
            M EPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQAL+QM D+ SAV+A+Q+
Sbjct: 1    MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVNALQF 60

Query: 1470 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 1291
            + +VQPS+RGRNVY+QFSSHQELTT DQN  GR  GD+   PNRILLVTIHH+LYPITVE
Sbjct: 61   FANVQPSIRGRNVYVQFSSHQELTTADQNAQGR--GDE---PNRILLVTIHHMLYPITVE 115

Query: 1290 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 1111
            VLHQVF PHGFVEKIVTFQKSAGFQAL+QYQTRQ A++ART+LQGRNIYDGCCQLDIQFS
Sbjct: 116  VLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAISARTALQGRNIYDGCCQLDIQFS 175

Query: 1110 NLTELQVNYNNERSRDFTNPSLPSEQKGR-SSQPGYGDAGSLYPLQPAGA-RVAFPQ 946
            NL ELQVNYNNERSRDFTNPSLPSE KGR S QPGYGDAG +Y LQ +GA  V FPQ
Sbjct: 176  NLDELQVNYNNERSRDFTNPSLPSEPKGRPSQQPGYGDAGGMYALQASGAGPVGFPQ 232



 Score =  341 bits (875), Expect(2) = 0.0
 Identities = 168/214 (78%), Positives = 185/214 (86%)
 Frame = -3

Query: 877 QMGNXXXXXXAFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLL 698
           QM N      AF GGLPPG+SGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNI R+KLL
Sbjct: 232 QMANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIARIKLL 291

Query: 697 RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNR 518
           RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSKH +IT GADTHEY NSNLNR
Sbjct: 292 RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNR 351

Query: 517 FNRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXEHGSIVNTKLFEVNAKKQALIL 338
           FNRNA+KNYRYCCSPTKMIH+SSL Q+           EHG I+NTKLFE+N KKQALI+
Sbjct: 352 FNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIVNLLEEHGPIINTKLFEMNGKKQALIM 411

Query: 337 FETEEQATEALVCKHATTIDRSVIRISFSQLQSI 236
           F+TEEQATEALVCKHA+++  S+IRISFSQLQSI
Sbjct: 412 FDTEEQATEALVCKHASSLSGSIIRISFSQLQSI 445