BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002581
         (1832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]   621   e-175
emb|CBI31778.3| unnamed protein product [Vitis vinifera]              620   e-175
ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   620   e-175
ref|XP_003545384.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   595   e-167
ref|XP_003518490.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   592   e-167

>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
          Length = 666

 Score =  621 bits (1601), Expect = e-175
 Identities = 332/495 (67%), Positives = 385/495 (77%), Gaps = 16/495 (3%)
 Frame = +3

Query: 201  MNRLFKKSATSLISSKQTLTALISIDV------FRAFSSVTPSQSFNSHSDFALTKKKNI 362
            M  +  + ++SL S K  + AL S+        F     ++ S S    +   +T    I
Sbjct: 1    MMNIISRKSSSLASVKAPIRALASVPHVHSLLHFHIHPPISTSASDAVVARNVVTSAAPI 60

Query: 363  PSPSN--GFSGIRGIHF--SSGPLGYKA------EARFDDFSDEEKTLKGSGGDEGLEIS 512
            P  S   GFSG R  +F   SGPL ++A      E    DFSDEEK+ KG  GDEGLEIS
Sbjct: 61   PPLSGLLGFSGFRVRNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKG--GDEGLEIS 118

Query: 513  KLGIDQSMVNALAGKGITKLFPIQKAVLDPAMQGRDMIGRARTGTGKTLAFGIPILDKIT 692
            KLGI Q +V+ALA KGITKLFPIQ+AVL+PAMQGRDMIGRARTGTGKTLAFGIPI+DK+ 
Sbjct: 119  KLGIAQEIVSALANKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVI 178

Query: 693  SFNNAHGKGRNPLAIVLAPTRELAKQVDKEFRECAPHLDALCCYGGVPKYTQTQQLNYGV 872
             +N  HG+GRNPLA+VLAPTRELA+QV+KEF E AP+LD LC YGG P   Q   L+YGV
Sbjct: 179  QYNAKHGRGRNPLALVLAPTRELARQVEKEFXESAPNLDTLCVYGGTPISRQMNSLDYGV 238

Query: 873  DVVVGTPGRIIDLCETRALDLSEVQFAVLDEADQMLAVGFEEDVEKILQKLPQKRQTMMF 1052
            DVVVGTPGRIIDL +  AL+LSEVQF VLDEADQMLAVGFEEDVE IL+KLPQ RQ+MMF
Sbjct: 239  DVVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMF 298

Query: 1053 SATMPQWIRQLSRKYLRDALIIDLVGDSDKKLAEGISLYAIQADKFGKAGILGSLIKDHA 1232
            SATMP WIR+L++KYL++ L IDLVGDSD+KLAEGISLY+I ++ + KA I+G LI +HA
Sbjct: 299  SATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPLITEHA 358

Query: 1233 KGGKCIVFTQTKRDADRLSYALQRSLNCEPLHGDISQGQREKTLSGFRDGRFNVLVATDV 1412
            KGGKCIVFTQTKRDADRL+YA+ R+  CE LHGDISQ QRE+TLSGFRDG FNVLVATDV
Sbjct: 359  KGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDV 418

Query: 1413 AARGLDVPNVDLIIHYDSPSSSEIFVHRSGRTGRAGKKGTAILIYTDDQIRIVRGIEKDV 1592
            AARGLD+PNVDLIIHY+ P+SSEIFVHRSGRTGRAGKKGTAILIY + Q R VR IE+D+
Sbjct: 419  AARGLDIPNVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDI 478

Query: 1593 GSKFSELPRIAAEPG 1637
            G KFSELPRIA E G
Sbjct: 479  GCKFSELPRIAIEGG 493


>emb|CBI31778.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  620 bits (1599), Expect = e-175
 Identities = 332/495 (67%), Positives = 385/495 (77%), Gaps = 16/495 (3%)
 Frame = +3

Query: 201  MNRLFKKSATSLISSKQTLTALISIDV------FRAFSSVTPSQSFNSHSDFALTKKKNI 362
            M  +  + ++SL S K  + AL S+        F     ++ S S    +   +T    I
Sbjct: 1    MMNIISRKSSSLASVKAPIRALASVPHVHSLLHFHIHPPISTSASDAVVARNVVTSAAPI 60

Query: 363  PSPSN--GFSGIRGIHF--SSGPLGYKA------EARFDDFSDEEKTLKGSGGDEGLEIS 512
            P  S   GFSG R  +F   SGPL ++A      E    DFSDEEK+ KG  GDEGLEIS
Sbjct: 61   PPLSGLLGFSGFRVRNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKG--GDEGLEIS 118

Query: 513  KLGIDQSMVNALAGKGITKLFPIQKAVLDPAMQGRDMIGRARTGTGKTLAFGIPILDKIT 692
            KLGI Q +V+ALA KGITKLFPIQ+AVL+PAMQGRDMIGRARTGTGKTLAFGIPI+DK+ 
Sbjct: 119  KLGIAQEIVSALANKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVI 178

Query: 693  SFNNAHGKGRNPLAIVLAPTRELAKQVDKEFRECAPHLDALCCYGGVPKYTQTQQLNYGV 872
             +N  HG+GRNPLA+VLAPTRELA+QV+KEF E AP+LD LC YGG P   Q   L+YGV
Sbjct: 179  QYNAKHGRGRNPLALVLAPTRELARQVEKEFCESAPNLDTLCVYGGTPISRQMNSLDYGV 238

Query: 873  DVVVGTPGRIIDLCETRALDLSEVQFAVLDEADQMLAVGFEEDVEKILQKLPQKRQTMMF 1052
            DVVVGTPGRIIDL +  AL+LSEVQF VLDEADQMLAVGFEEDVE IL+KLPQ RQ+MMF
Sbjct: 239  DVVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMF 298

Query: 1053 SATMPQWIRQLSRKYLRDALIIDLVGDSDKKLAEGISLYAIQADKFGKAGILGSLIKDHA 1232
            SATMP WIR+L++KYL++ L IDLVGDSD+KLAEGISLY+I ++ + KA I+G LI +HA
Sbjct: 299  SATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPLITEHA 358

Query: 1233 KGGKCIVFTQTKRDADRLSYALQRSLNCEPLHGDISQGQREKTLSGFRDGRFNVLVATDV 1412
            KGGKCIVFTQTKRDADRL+YA+ R+  CE LHGDISQ QRE+TLSGFRDG FNVLVATDV
Sbjct: 359  KGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDV 418

Query: 1413 AARGLDVPNVDLIIHYDSPSSSEIFVHRSGRTGRAGKKGTAILIYTDDQIRIVRGIEKDV 1592
            AARGLD+PNVDLIIHY+ P+SSEIFVHRSGRTGRAGKKGTAILIY + Q R VR IE+D+
Sbjct: 419  AARGLDIPNVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDI 478

Query: 1593 GSKFSELPRIAAEPG 1637
            G KFSELPRIA E G
Sbjct: 479  GCKFSELPRIAIEGG 493


>ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Vitis
            vinifera]
          Length = 666

 Score =  620 bits (1599), Expect = e-175
 Identities = 332/495 (67%), Positives = 385/495 (77%), Gaps = 16/495 (3%)
 Frame = +3

Query: 201  MNRLFKKSATSLISSKQTLTALISIDV------FRAFSSVTPSQSFNSHSDFALTKKKNI 362
            M  +  + ++SL S K  + AL S+        F     ++ S S    +   +T    I
Sbjct: 1    MMNIISRKSSSLASVKAPIRALASVPHVHSLLHFHIHPPISTSASDAVVARNVVTSAAPI 60

Query: 363  PSPSN--GFSGIRGIHF--SSGPLGYKA------EARFDDFSDEEKTLKGSGGDEGLEIS 512
            P  S   GFSG R  +F   SGPL ++A      E    DFSDEEK+ KG  GDEGLEIS
Sbjct: 61   PPLSGLLGFSGFRVRNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKG--GDEGLEIS 118

Query: 513  KLGIDQSMVNALAGKGITKLFPIQKAVLDPAMQGRDMIGRARTGTGKTLAFGIPILDKIT 692
            KLGI Q +V+ALA KGITKLFPIQ+AVL+PAMQGRDMIGRARTGTGKTLAFGIPI+DK+ 
Sbjct: 119  KLGIAQEIVSALANKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVI 178

Query: 693  SFNNAHGKGRNPLAIVLAPTRELAKQVDKEFRECAPHLDALCCYGGVPKYTQTQQLNYGV 872
             +N  HG+GRNPLA+VLAPTRELA+QV+KEF E AP+LD LC YGG P   Q   L+YGV
Sbjct: 179  QYNAKHGRGRNPLALVLAPTRELARQVEKEFCESAPNLDTLCVYGGTPISRQMNSLDYGV 238

Query: 873  DVVVGTPGRIIDLCETRALDLSEVQFAVLDEADQMLAVGFEEDVEKILQKLPQKRQTMMF 1052
            DVVVGTPGRIIDL +  AL+LSEVQF VLDEADQMLAVGFEEDVE IL+KLPQ RQ+MMF
Sbjct: 239  DVVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMF 298

Query: 1053 SATMPQWIRQLSRKYLRDALIIDLVGDSDKKLAEGISLYAIQADKFGKAGILGSLIKDHA 1232
            SATMP WIR+L++KYL++ L IDLVGDSD+KLAEGISLY+I ++ + KA I+G LI +HA
Sbjct: 299  SATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPLITEHA 358

Query: 1233 KGGKCIVFTQTKRDADRLSYALQRSLNCEPLHGDISQGQREKTLSGFRDGRFNVLVATDV 1412
            KGGKCIVFTQTKRDADRL+YA+ R+  CE LHGDISQ QRE+TLSGFRDG FNVLVATDV
Sbjct: 359  KGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDV 418

Query: 1413 AARGLDVPNVDLIIHYDSPSSSEIFVHRSGRTGRAGKKGTAILIYTDDQIRIVRGIEKDV 1592
            AARGLD+PNVDLIIHY+ P+SSEIFVHRSGRTGRAGKKGTAILIY + Q R VR IE+D+
Sbjct: 419  AARGLDIPNVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDI 478

Query: 1593 GSKFSELPRIAAEPG 1637
            G KFSELPRIA E G
Sbjct: 479  GCKFSELPRIAIEGG 493


>ref|XP_003545384.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Glycine max]
          Length = 610

 Score =  595 bits (1533), Expect = e-167
 Identities = 305/457 (66%), Positives = 363/457 (79%), Gaps = 6/457 (1%)
 Frame = +3

Query: 279  VFRAFSSVTPSQSFNSHSDFALTKKKNIPSPSNGFSGIRGIHFSSGPLGYK------AEA 440
            + R   S    + F +    A T   +   PS  F   R  H ++GPL ++      AE 
Sbjct: 5    ILRRTCSTLSRRGFPAALISASTAGNHFRPPSAAFIS-RTFHSNTGPLNFRSSSCHRAEY 63

Query: 441  RFDDFSDEEKTLKGSGGDEGLEISKLGIDQSMVNALAGKGITKLFPIQKAVLDPAMQGRD 620
              DDF  EE + KG+  DEGLEI+KLGI + +V+ALA KGITKLFPIQ+AVL+PAMQGRD
Sbjct: 64   AVDDFPYEEGS-KGNAADEGLEIAKLGISEDIVSALAKKGITKLFPIQRAVLEPAMQGRD 122

Query: 621  MIGRARTGTGKTLAFGIPILDKITSFNNAHGKGRNPLAIVLAPTRELAKQVDKEFRECAP 800
            MIGRARTGTGKTLAFGIPI+DKI  FN  HG+GR+PLA+VLAPTRELA+QV+ EF E AP
Sbjct: 123  MIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGRDPLALVLAPTRELARQVETEFCESAP 182

Query: 801  HLDALCCYGGVPKYTQTQQLNYGVDVVVGTPGRIIDLCETRALDLSEVQFAVLDEADQML 980
            +LD +C YGG P   Q ++L+YGVD+ VGTPGRIIDL    AL+L +VQF VLDEADQML
Sbjct: 183  NLDTICVYGGTPISRQMRELDYGVDIAVGTPGRIIDLLNRGALNLKDVQFVVLDEADQML 242

Query: 981  AVGFEEDVEKILQKLPQKRQTMMFSATMPQWIRQLSRKYLRDALIIDLVGDSDKKLAEGI 1160
             VGF+EDVEKIL++LP KRQT+MFSATMP WI+Q+SR YL + L IDLVGDSD+KLA+GI
Sbjct: 243  QVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQISRNYLNNPLTIDLVGDSDQKLADGI 302

Query: 1161 SLYAIQADKFGKAGILGSLIKDHAKGGKCIVFTQTKRDADRLSYALQRSLNCEPLHGDIS 1340
            SLY+I  D + KAGIL  LI +HAKGGKCIVFTQTKRDADRLSY + RS+ CE LHGDIS
Sbjct: 303  SLYSIATDLYVKAGILAPLITEHAKGGKCIVFTQTKRDADRLSYTMARSVKCEALHGDIS 362

Query: 1341 QGQREKTLSGFRDGRFNVLVATDVAARGLDVPNVDLIIHYDSPSSSEIFVHRSGRTGRAG 1520
            Q QREKTL+GFR+G FNVLVATDVA+RGLD+PNVDL+IHYD P++SEIFVHRSGRTGRAG
Sbjct: 363  QAQREKTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAG 422

Query: 1521 KKGTAILIYTDDQIRIVRGIEKDVGSKFSELPRIAAE 1631
            KKGTAIL+YT+DQ R V+ IE+DVGS+F+ELPRIA +
Sbjct: 423  KKGTAILVYTEDQSRAVKLIERDVGSRFTELPRIAVD 459


>ref|XP_003518490.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Glycine max]
          Length = 595

 Score =  592 bits (1527), Expect = e-167
 Identities = 300/419 (71%), Positives = 351/419 (83%), Gaps = 6/419 (1%)
 Frame = +3

Query: 393  RGIHFSSGPLGYKA------EARFDDFSDEEKTLKGSGGDEGLEISKLGIDQSMVNALAG 554
            R  H + GPL ++A      E   DDF  EE + KG+  DEGLEI+KLGI Q +V+ALA 
Sbjct: 48   RTFHSNPGPLNFRASSCHRAEYAVDDFPYEEGS-KGNA-DEGLEIAKLGISQDIVSALAK 105

Query: 555  KGITKLFPIQKAVLDPAMQGRDMIGRARTGTGKTLAFGIPILDKITSFNNAHGKGRNPLA 734
            KGITKLFPIQ+AVL+PAMQGRDMIGRARTGTGKTLAFGIPI+DK+  FN  HG+GR+PLA
Sbjct: 106  KGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQFNAKHGRGRDPLA 165

Query: 735  IVLAPTRELAKQVDKEFRECAPHLDALCCYGGVPKYTQTQQLNYGVDVVVGTPGRIIDLC 914
            +VLAPTRELA+QV+ EF E AP+LD +C YGG P   Q +QL+YGVD+ VGTPGRIIDL 
Sbjct: 166  LVLAPTRELARQVESEFCESAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDLL 225

Query: 915  ETRALDLSEVQFAVLDEADQMLAVGFEEDVEKILQKLPQKRQTMMFSATMPQWIRQLSRK 1094
               AL+L +VQF VLDEADQML VGF+EDVEKIL++LP KRQT+MFSATMP WI+Q+SR 
Sbjct: 226  NRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQISRN 285

Query: 1095 YLRDALIIDLVGDSDKKLAEGISLYAIQADKFGKAGILGSLIKDHAKGGKCIVFTQTKRD 1274
            YL + L IDLVGDSD+KLA+GISLY+I  D + KAGIL  LI +HAKGGKCIVFTQTKRD
Sbjct: 286  YLNNPLTIDLVGDSDQKLADGISLYSIATDLYVKAGILAPLITEHAKGGKCIVFTQTKRD 345

Query: 1275 ADRLSYALQRSLNCEPLHGDISQGQREKTLSGFRDGRFNVLVATDVAARGLDVPNVDLII 1454
            ADRLSYA+ RS+ CE LHGDISQ QREKTL+GFR+G FNVLVATDVA+RGLD+PNVDL+I
Sbjct: 346  ADRLSYAMARSVKCEALHGDISQAQREKTLAGFRNGHFNVLVATDVASRGLDIPNVDLVI 405

Query: 1455 HYDSPSSSEIFVHRSGRTGRAGKKGTAILIYTDDQIRIVRGIEKDVGSKFSELPRIAAE 1631
            HYD P++SEIFVHRSGRTGRAGKKGTAIL+YT+DQ R V+ IE+DVGS+FSELPRIA +
Sbjct: 406  HYDLPNNSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVKLIERDVGSRFSELPRIAVD 464