BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002500
         (3360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...  1287   0.0  
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu...  1236   0.0  
emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group] g...  1190   0.0  
gb|EAY94172.1| hypothetical protein OsI_15944 [Oryza sativa Indi...  1189   0.0  
ref|XP_002888226.1| helicase domain-containing protein [Arabidop...  1177   0.0  

>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
            gi|297739540|emb|CBI29722.3| unnamed protein product
            [Vitis vinifera]
          Length = 1458

 Score = 1287 bits (3331), Expect = 0.0
 Identities = 665/976 (68%), Positives = 779/976 (79%), Gaps = 7/976 (0%)
 Frame = +3

Query: 3    DAQNIVAAFALYRLFTEYPVDQLITEPYSSYAVKLMEGETPTRIEDSEETRRTSFVDXXX 182
            DAQN VAA+ALY+LF + P+   ITEPY+S+ ++  EGE+  RIEDSEE RR  FV+   
Sbjct: 476  DAQNAVAAYALYQLFPDLPIHLAITEPYASFVIQWKEGESSIRIEDSEEDRRAGFVNSIL 535

Query: 183  XXXXXXXXXXXXF--GKTPGEAQVCEKIESPSTAAKVERIRKMK-NVLKVGESASLRHEQ 353
                              P + Q+ +  E+ +  A    ++  +    K  ES+ L+ E 
Sbjct: 536  DAGDSGSTAFVDVTDNSLPKKFQMPQIEENRNLNAAGPDLKPGRVGNFKEAESSYLKQEY 595

Query: 354  ENKMGKAKYKEMLDARAALPIAEFRGDILRLLKENDALVVCGETGCGKTTQVPQFILDDM 533
            ENKM   KYK+ML  R+ LPIAE + +IL++LKE   LVVCGETG GKTTQVPQFILDDM
Sbjct: 596  ENKMKIGKYKDMLKTRSGLPIAELKSEILQVLKEKSVLVVCGETGSGKTTQVPQFILDDM 655

Query: 534  IKAGLGGYCNIICTQPRRIAVMSVAERVADERCEPPPGSEGSLVGYQVRLDSARSERTKL 713
            I+AG GGYCNIICTQPRRIA +SVAERVADERCEP PGS+GS+VGYQVRLDSA + RTKL
Sbjct: 656  IEAGNGGYCNIICTQPRRIAAISVAERVADERCEPSPGSDGSVVGYQVRLDSASNVRTKL 715

Query: 714  LFCTTGILLRKLAGDKDLSDVTHVIVDEVHERTLLGDFLLIILKNLIEKQTARGTRKLKV 893
            LFCTTGILLRKLAGDK+LS +THVIVDEVHER+LLGDFLLI+LKNLIEKQ+   T KLKV
Sbjct: 716  LFCTTGILLRKLAGDKNLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSTDSTPKLKV 775

Query: 894  ILMSATVDSTLFSRYFGDCPVLTAQGRTHPVSTYFLEDIYESLKYCLGSDSPASLRHMTL 1073
            ILMSATVDS LFSRYFG CPV+TA GRTHPVSTYFLEDIYES+ Y L SDSPAS+R+ T 
Sbjct: 776  ILMSATVDSNLFSRYFGGCPVITAVGRTHPVSTYFLEDIYESIDYRLASDSPASIRYET- 834

Query: 1074 RNEKFRSSTVDNRRGNRNLVLSSWGDDSLLSEDPVNPNYDPSLYESLSERTQENLKSLNE 1253
             + K ++S V+NRRG RNLVLS+WGDDS+LSE+ +NP Y P+ Y+S SE+TQ+NLK LNE
Sbjct: 835  -SIKQKTSAVNNRRGKRNLVLSAWGDDSVLSEECINPYYVPNAYQSYSEKTQQNLKRLNE 893

Query: 1254 DVIDYELLEDLVCHVDETYPAGAMLIFLPGVAEIEMLLDRLLASYRFGGNSSDWILPLHS 1433
            DVIDY+LLEDLVC+VDETYPAGA+L+FLPGVAEI MLLD+L ASYRF G SSDW+LPLHS
Sbjct: 894  DVIDYDLLEDLVCYVDETYPAGAILVFLPGVAEIYMLLDKLAASYRFRGLSSDWLLPLHS 953

Query: 1434 TLASVDQKKVFMSPPENIRKVIIATDIAETSITIDDVIYVIDCGKHKEQRFNPHKKLSSM 1613
            ++AS DQ+KVF+ PPENIRKVIIAT+IAETSITIDDV+YVIDCGKHKE R+NP KKLSSM
Sbjct: 954  SIASDDQRKVFLQPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSM 1013

Query: 1614 VEDWISXXXXXXXXXXXXXVKPGICFCLYTHHRFDNLMHPYQAPEMLRMPLVELCLQVKS 1793
            VEDWIS             VKPGICF LYTH+RF+ L+ P+Q PEMLRMPLVELCLQ+K 
Sbjct: 1014 VEDWISQANAKQRRGRAGRVKPGICFSLYTHYRFEKLLRPFQVPEMLRMPLVELCLQIKL 1073

Query: 1794 LSLGFVKPFLTKAIEPPREEAMTSALSVLYMVGAIEGDEKLTPLGYHLAKLPVDVLIGKM 1973
            LSLG +KPFL+KA+EPP EEAMTSA+SVLY VGAIEGDE+LTPLG+HLAKLPVDVLIGKM
Sbjct: 1074 LSLGNIKPFLSKALEPPTEEAMTSAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKM 1133

Query: 1974 MIYGGMFCCLSPILSISAFLSYKSPFAHAKEERQHVQIAKQSLLGDKVDGF--RNGGDMQ 2147
            M+YG +F CLSPILSISAFLSYKSPF   K+ERQ+V+ AK +LL D+VDG    N G  Q
Sbjct: 1134 MLYGAIFGCLSPILSISAFLSYKSPFLSPKDERQNVERAKLALLTDQVDGASDSNDGARQ 1193

Query: 2148 SDHIIMVVAYNKWAKILHEKGAKAAQXXXXXXXXXXXVMYMIRDMRIQFGSLLADIGFIN 2327
            SDH++M+VAY KW +ILHEKGAKAAQ           VM+MIRDMR+QFG+LLADIG I+
Sbjct: 1194 SDHLVMMVAYKKWERILHEKGAKAAQHFCNSYFLSSSVMHMIRDMRVQFGNLLADIGLIS 1253

Query: 2328 LPKTFK-TGNMKDKLDHWFSDMTQSFNKYSHHSSVVKSILCAGLYPNVAVTADGIVDVEF 2504
            LPK ++     K+ L+ WFSD++Q FN YSHH S+VK+ILCAGLYPNVA T  GI  V  
Sbjct: 1254 LPKKYQIERKKKENLNSWFSDISQPFNTYSHHFSIVKAILCAGLYPNVAATEQGIAGVAL 1313

Query: 2505 CRNLNSSSRSAGKGNLNWYDRRTKVQIHPSSINCNLKAVQYPFLVYLEKVETSSVFLRDT 2684
              N+  SS SA KG   WYD R +V IHPSSIN NL A QYPFLV+LEKVET+ VFLRDT
Sbjct: 1314 -GNIIQSSGSATKGRPVWYDGRREVHIHPSSINGNLNAFQYPFLVFLEKVETNKVFLRDT 1372

Query: 2685 SVISPYSILLFGGSINVLHQTGLLTIDGWIKLTAPAQIAVLFKELRLTLHSVLKELIKKP 2864
            ++ISPYSILLFGGSINV HQ+G++ IDGW+KL APAQIAVLFKELR+TLHSVLKELI+KP
Sbjct: 1373 TIISPYSILLFGGSINVQHQSGMVNIDGWLKLAAPAQIAVLFKELRVTLHSVLKELIRKP 1432

Query: 2865 EKA-TVENEVIRSIVH 2909
            EKA  V NEV++SI+H
Sbjct: 1433 EKAIVVNNEVVKSIIH 1448


>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1509

 Score = 1236 bits (3199), Expect = 0.0
 Identities = 637/969 (65%), Positives = 767/969 (79%), Gaps = 6/969 (0%)
 Frame = +3

Query: 3    DAQNIVAAFALYRLFTEYPVDQLITEPYSSYAVKLMEGETPTRIEDSEETRRTSFVDXXX 182
            DAQN +AAFAL++LF + PV  ++++PY S  ++  EGE+ +++E++ + RR  FVD   
Sbjct: 478  DAQNRIAAFALHQLFPDLPVHLIVSDPYDSLILQWKEGESSSKVENTVDDRRAGFVDWLL 537

Query: 183  XXXXXXXXXXXX--FGKTPGEAQVCEKIESPSTAAKVERIRKMKNVLKVGESASLRHEQE 356
                            +T   +QV E+ ++ S A  V  + + +N     E++ LR EQE
Sbjct: 538  NADESTATNHATNRLSETAQNSQV-EETKNLSDAVAVP-VTQGENYTTDVENSYLRQEQE 595

Query: 357  NKMGKAKYKEMLDARAALPIAEFRGDILRLLKENDALVVCGETGCGKTTQVPQFILDDMI 536
             K    KY+E+L  R ALPIA  + +IL++LKEN+ LVVCGETG GKTTQVPQFILDDMI
Sbjct: 596  KKKNVLKYREILKTRGALPIAGLKNEILQMLKENNCLVVCGETGSGKTTQVPQFILDDMI 655

Query: 537  KAGLGGYCNIICTQPRRIAVMSVAERVADERCEPPPGSEGSLVGYQVRLDSARSERTKLL 716
            ++G GG CNIICTQPRRIA +SVAERVA ER EPPPGS GSLVGYQVRLDSAR+ERTKLL
Sbjct: 656  ESGRGGQCNIICTQPRRIAAISVAERVAYERYEPPPGSGGSLVGYQVRLDSARNERTKLL 715

Query: 717  FCTTGILLRKLAGDKDLSDVTHVIVDEVHERTLLGDFLLIILKNLIEKQTARGTRKLKVI 896
            FCTTGILLR+LAGD++LS +THVIVDEVHER+LLGDFLLI+LK+L+EKQ+ +GT KLKVI
Sbjct: 716  FCTTGILLRRLAGDRNLSGITHVIVDEVHERSLLGDFLLIVLKSLLEKQSDQGTPKLKVI 775

Query: 897  LMSATVDSTLFSRYFGDCPVLTAQGRTHPVSTYFLEDIYESLKYCLGSDSPASLRHMTLR 1076
            LMSATVDSTLFS YFG CPVL+AQGRTHPV+TYFLEDIYES+ Y L SDSPA+L   T  
Sbjct: 776  LMSATVDSTLFSNYFGHCPVLSAQGRTHPVTTYFLEDIYESIDYHLASDSPAALGLQTST 835

Query: 1077 NEKFRSSTVDNRRGNRNLVLSSWGDDSLLSEDPVNPNYDPSLYESLSERTQENLKSLNED 1256
              K  S  V++RRG +NLVLS WGDDSLLSE+ +NP++  S Y+S SE+TQ+NLK L+ED
Sbjct: 836  IAK--SGPVNDRRGKKNLVLSGWGDDSLLSEEIINPHFVSSNYQSYSEQTQKNLKRLDED 893

Query: 1257 VIDYELLEDLVCHVDETYPAGAMLIFLPGVAEIEMLLDRLLASYRFGGNSSDWILPLHST 1436
            +IDY+LLEDL+ HVD+TY  GA+L+FLPG++EI MLLDRL+ASYRFGG SS+W+LPLHS+
Sbjct: 894  IIDYDLLEDLIFHVDQTYGEGAILVFLPGMSEIHMLLDRLVASYRFGGPSSNWVLPLHSS 953

Query: 1437 LASVDQKKVFMSPPENIRKVIIATDIAETSITIDDVIYVIDCGKHKEQRFNPHKKLSSMV 1616
            +AS DQKKVF+ PPENIRKVIIAT+IAETSITIDDV+YVIDCGKHKE R+NP KKL+SMV
Sbjct: 954  IASTDQKKVFLRPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLTSMV 1013

Query: 1617 EDWISXXXXXXXXXXXXXVKPGICFCLYTHHRFDNLMHPYQAPEMLRMPLVELCLQVKSL 1796
            EDWIS             VKPGICFCLYT HRF  LM PYQ PEMLRMPLVELCLQ+K L
Sbjct: 1014 EDWISQANARQRRGRAGRVKPGICFCLYTCHRFKKLMRPYQVPEMLRMPLVELCLQIKIL 1073

Query: 1797 SLGFVKPFLTKAIEPPREEAMTSALSVLYMVGAIEGDEKLTPLGYHLAKLPVDVLIGKMM 1976
            SLG +KPFL+KA+EPPR+EAMTSA+S+LY VGAIEGDE+LTPLG+HLAKLPVD+LIGKMM
Sbjct: 1074 SLGHIKPFLSKALEPPRDEAMTSAISLLYEVGAIEGDEELTPLGHHLAKLPVDLLIGKMM 1133

Query: 1977 IYGGMFCCLSPILSISAFLSYKSPFAHAKEERQHVQIAKQSLLGDKVDGFR--NGGDMQS 2150
            +YG +F CLSPILSISAFLSYKSPF + K+E+Q+V+ AK +LL DKVDG    N GD QS
Sbjct: 1134 LYGAIFGCLSPILSISAFLSYKSPFMYPKDEKQNVERAKLALLTDKVDGSNDLNHGDRQS 1193

Query: 2151 DHIIMVVAYNKWAKILHEKGAKAAQXXXXXXXXXXXVMYMIRDMRIQFGSLLADIGFINL 2330
            DHIIM+VAY KW  ILHEKG KAAQ           VM+MIRDMRIQFG+LLADIGFINL
Sbjct: 1194 DHIIMMVAYKKWDNILHEKGVKAAQQFCSTYFLSNSVMHMIRDMRIQFGTLLADIGFINL 1253

Query: 2331 PKTFK-TGNMKDKLDHWFSDMTQSFNKYSHHSSVVKSILCAGLYPNVAVTADGIVDVEFC 2507
            P+ ++  G  K+K D W SD +Q FN YSHHSS+VK+ILCAGLYPNVA T  GI+     
Sbjct: 1254 PQNYQILGRNKEKFDGWLSDKSQPFNTYSHHSSIVKAILCAGLYPNVAATQQGIIATAI- 1312

Query: 2508 RNLNSSSRSAGKGNLNWYDRRTKVQIHPSSINCNLKAVQYPFLVYLEKVETSSVFLRDTS 2687
             +L  S+  A KG   WYD R +V IHPSSIN  +KA Q+PFLV+LEKVET+ VFLRDT+
Sbjct: 1313 NSLKQSTIPAIKGYPVWYDGRREVHIHPSSINSKVKAFQHPFLVFLEKVETNKVFLRDTT 1372

Query: 2688 VISPYSILLFGGSINVLHQTGLLTIDGWIKLTAPAQIAVLFKELRLTLHSVLKELIKKPE 2867
            +ISP+SILLFGG INV HQTGL+T+DGW+KLTAPAQ AVLFKE R  +HS+LKEL++KP+
Sbjct: 1373 IISPFSILLFGGFINVQHQTGLVTVDGWLKLTAPAQYAVLFKEFRSAMHSLLKELVQKPK 1432

Query: 2868 KAT-VENEV 2891
             A  V+NE+
Sbjct: 1433 NAAIVDNEM 1441


>emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group]
            gi|116309362|emb|CAH66443.1| B0308C03.3 [Oryza sativa
            Indica Group]
          Length = 1439

 Score = 1190 bits (3078), Expect = 0.0
 Identities = 605/983 (61%), Positives = 754/983 (76%), Gaps = 14/983 (1%)
 Frame = +3

Query: 3    DAQNIVAAFALYRLFTEYPVDQLITEPYSSYAVKLMEGE---TPTRIEDSEETRRTSFVD 173
            +AQN VAAFALY+ F +  + QL+ EPY+S  ++  EGE   + +R+ D+E++RR  FVD
Sbjct: 447  EAQNRVAAFALYQFFADLSLRQLLIEPYASLVLRWQEGELSSSSSRVMDTEDSRRAGFVD 506

Query: 174  XXXXXXXXXXXXXXXFGKTPGEAQVCEKIE-SPSTAAKVERI---RKMKNVLKVGESASL 341
                                  +     IE S S   K E     R      +  ES  L
Sbjct: 507  KLLDMDANTTPHQVEDASDGATSVDSRSIEDSYSVHEKKETYLVNRTGSRSAEQVESTVL 566

Query: 342  RHEQENKMGKAKYKEMLDARAALPIAEFRGDILRLLKENDALVVCGETGCGKTTQVPQFI 521
            +   ENKM ++ Y +ML+ARA+LPI+ F+   L+LLKEND +VVCGETGCGKTTQVPQFI
Sbjct: 567  KKHLENKMKQSSYLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFI 626

Query: 522  LDDMIKAGLGGYCNIICTQPRRIAVMSVAERVADERCEPPPGSEGSLVGYQVRLDSARSE 701
            LDDMI++ LGGYC+I+CTQPRRIA +SVAERV+ ERCE  PGS+ SLVGYQVRLDSAR+E
Sbjct: 627  LDDMIESELGGYCSIVCTQPRRIAAISVAERVSSERCESSPGSKDSLVGYQVRLDSARNE 686

Query: 702  RTKLLFCTTGILLRKLAGDKDLSDVTHVIVDEVHERTLLGDFLLIILKNLIEKQTARGTR 881
            RTKLLFCTTGILLRKL+G+ DLSDVTHV+VDEVHERT+LGDFLLI+LK+L+EK++ +  R
Sbjct: 687  RTKLLFCTTGILLRKLSGNNDLSDVTHVVVDEVHERTILGDFLLIVLKSLVEKRSNQPGR 746

Query: 882  KLKVILMSATVDSTLFSRYFGDCPVLTAQGRTHPVSTYFLEDIYESLKYCLGSDSPASLR 1061
            KLKVILMSATVDS+LF+RYFGDCPV+  +GRTHPVS++FLED+YE ++YCL  DSPAS  
Sbjct: 747  KLKVILMSATVDSSLFARYFGDCPVINVEGRTHPVSSHFLEDVYEKMEYCLALDSPASGA 806

Query: 1062 HMTLRNEKFR--SSTVDNRRGNRNLVLSSWGDDSLLSEDPVNPNYDPSLYESLSERTQEN 1235
            +     EK++  SSTV+NRRG +NLVLSSWGD+S+L+ED VNP+Y    Y+S SERT +N
Sbjct: 807  YFQQHGEKWKNASSTVNNRRGKKNLVLSSWGDESVLTEDYVNPHYTTDCYQSYSERTNQN 866

Query: 1236 LKSLNEDVIDYELLEDLVCHVDETYPAGAMLIFLPGVAEIEMLLDRLLASYRFGGNSSDW 1415
            LK LNEDVID++LLEDL+C++DE  P GA+L+FLPGVAEI+ML+DRL AS RFG  SSDW
Sbjct: 867  LKRLNEDVIDFDLLEDLICYIDENCPPGAVLVFLPGVAEIDMLIDRLSASVRFGRESSDW 926

Query: 1416 ILPLHSTLASVDQKKVFMSPPENIRKVIIATDIAETSITIDDVIYVIDCGKHKEQRFNPH 1595
            ILPLHS LA  DQ+KVF SPPENIRK+I+ATDIAETSITIDDVIYV+D GKHKE R+NP 
Sbjct: 927  ILPLHSLLAPTDQRKVFQSPPENIRKIIVATDIAETSITIDDVIYVVDTGKHKENRYNPQ 986

Query: 1596 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICFCLYTHHRFDNLMHPYQAPEMLRMPLVEL 1775
            KK+SS+VEDWIS             VKPG+CFCLYT HRF+ +M P+Q PEMLRMPL EL
Sbjct: 987  KKMSSIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFEKMMRPFQVPEMLRMPLTEL 1046

Query: 1776 CLQVKSLSLGFVKPFLTKAIEPPREEAMTSALSVLYMVGAIEGDEKLTPLGYHLAKLPVD 1955
            CLQ+KSL LG +K FL KAIEPP+EEA++SA+ +LY VGA EG E+L+PLGYHLAKLPVD
Sbjct: 1047 CLQIKSLHLGGIKSFLLKAIEPPKEEAISSAIDLLYQVGAFEGHEELSPLGYHLAKLPVD 1106

Query: 1956 VLIGKMMIYGGMFCCLSPILSISAFLSYKSPFAHAKEERQHVQIAKQSLLGDKVDGFRNG 2135
            VLIGKMM+YG +F CLSPILS++AFLSYKSPF   K+E+Q+V+ AK SL+ + +DG  + 
Sbjct: 1107 VLIGKMMLYGAIFGCLSPILSVAAFLSYKSPFISPKDEKQNVEKAKASLMNENLDGSAST 1166

Query: 2136 GD-MQSDHIIMVVAYNKWAKILHEKGAKAAQXXXXXXXXXXXVMYMIRDMRIQFGSLLAD 2312
             D  QSDH++MV+AYNKW++IL E GA++A            VMYM+RDMR+Q+G+LLAD
Sbjct: 1167 ADNKQSDHLLMVIAYNKWSRILRENGARSAHQFCRSFYLNSTVMYMVRDMRLQYGTLLAD 1226

Query: 2313 IGFINLPKTF---KTGNMKDKLDHWFSDMTQSFNKYSHHSSVVKSILCAGLYPNVAVTAD 2483
            IG +++PK       G  K+ L+ WF++M+  FN Y+ +SSVVKS++CAGLYPNVA T +
Sbjct: 1227 IGLLDIPKDSLRPVDGTRKNTLESWFANMSLPFNLYARYSSVVKSVICAGLYPNVAATLE 1286

Query: 2484 GIVDVEFCRNLNSSSRSAGKGNLNWYDRRTKVQIHPSSINCNLKAVQYPFLVYLEKVETS 2663
            G VD         S   +GK    WYD R +V IHPSS+N +LKA QYPFLV+LEKVETS
Sbjct: 1287 G-VDPGALGGRKPSDFLSGKDRPRWYDGRREVHIHPSSMNHSLKAGQYPFLVFLEKVETS 1345

Query: 2664 SVFLRDTSVISPYSILLFGGSINVLHQTGLLTIDGWIKLTAPAQIAVLFKELRLTLHSVL 2843
             VFLRDTSVISPYS+LLFGG++ + HQTG++ IDGW++L A AQ AVLFK+LR+TL +VL
Sbjct: 1346 KVFLRDTSVISPYSLLLFGGTMVIQHQTGVVIIDGWLRLAAAAQTAVLFKQLRVTLDAVL 1405

Query: 2844 KELIKKPEKAT-VENEVIRSIVH 2909
            KELI+KPE AT V+NEV+RSI+H
Sbjct: 1406 KELIRKPEMATFVDNEVVRSIIH 1428


>gb|EAY94172.1| hypothetical protein OsI_15944 [Oryza sativa Indica Group]
          Length = 1439

 Score = 1189 bits (3076), Expect = 0.0
 Identities = 605/983 (61%), Positives = 754/983 (76%), Gaps = 14/983 (1%)
 Frame = +3

Query: 3    DAQNIVAAFALYRLFTEYPVDQLITEPYSSYAVKLMEGE---TPTRIEDSEETRRTSFVD 173
            +AQN VAAFALY+ F +  + QL+ EPY+S  ++  EGE   + +R+ D+E++RR  FVD
Sbjct: 447  EAQNRVAAFALYQFFADLSLRQLLIEPYASLVLRWQEGELSSSSSRVMDTEDSRRAGFVD 506

Query: 174  XXXXXXXXXXXXXXXFGKTPGEAQVCEKIE-SPSTAAKVERI---RKMKNVLKVGESASL 341
                                  +     IE S S   K E     R      +  ES  L
Sbjct: 507  KLLDMDANTTPHQVEDASDGATSVDSRSIEDSYSVHEKKETYLVNRTGSRSAEQVESTVL 566

Query: 342  RHEQENKMGKAKYKEMLDARAALPIAEFRGDILRLLKENDALVVCGETGCGKTTQVPQFI 521
            +   ENKM ++ Y +ML+ARA+LPI+ F+   L+LLKEND +VVCGETGCGKTTQVPQFI
Sbjct: 567  KKHLENKMKQSSYLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFI 626

Query: 522  LDDMIKAGLGGYCNIICTQPRRIAVMSVAERVADERCEPPPGSEGSLVGYQVRLDSARSE 701
            LDDMI++ LGGYC+I+CTQPRRIA +SVAERV+ ERCE  PGS+ SLVGYQVRLDSAR+E
Sbjct: 627  LDDMIESELGGYCSIVCTQPRRIAAISVAERVSSERCESSPGSKDSLVGYQVRLDSARNE 686

Query: 702  RTKLLFCTTGILLRKLAGDKDLSDVTHVIVDEVHERTLLGDFLLIILKNLIEKQTARGTR 881
            RTKLLFCTTGILLRKL+G+ DLSDVTHV+VDEVHERT+LGDFLLI+LK+L+EK++ +  R
Sbjct: 687  RTKLLFCTTGILLRKLSGNNDLSDVTHVVVDEVHERTILGDFLLIVLKSLVEKRSNQPGR 746

Query: 882  KLKVILMSATVDSTLFSRYFGDCPVLTAQGRTHPVSTYFLEDIYESLKYCLGSDSPASLR 1061
            KLKVILMSATVDS+LF+RYFGDCPV+  +GRTHPVS++FLED+YE ++YCL  DSPAS  
Sbjct: 747  KLKVILMSATVDSSLFARYFGDCPVINVEGRTHPVSSHFLEDVYEKMEYCLALDSPASGA 806

Query: 1062 HMTLRNEKFR--SSTVDNRRGNRNLVLSSWGDDSLLSEDPVNPNYDPSLYESLSERTQEN 1235
            +     EK++  SSTV+NRRG +NLVLSSWGD+S+L+ED VNP+Y    Y+S SERT +N
Sbjct: 807  YFQQHGEKWKNASSTVNNRRGKKNLVLSSWGDESVLTEDYVNPHYTTDCYQSYSERTNQN 866

Query: 1236 LKSLNEDVIDYELLEDLVCHVDETYPAGAMLIFLPGVAEIEMLLDRLLASYRFGGNSSDW 1415
            LK LNEDVID++LLEDL+C++DE  P GA+L+FLPGVAEI+ML+DRL AS RFG  SSDW
Sbjct: 867  LKRLNEDVIDFDLLEDLICYIDENCPPGAVLVFLPGVAEIDMLIDRLSASVRFGRESSDW 926

Query: 1416 ILPLHSTLASVDQKKVFMSPPENIRKVIIATDIAETSITIDDVIYVIDCGKHKEQRFNPH 1595
            ILPLHS LA  DQ+KVF SPPENIRK+I+ATDIAETSITIDDVIYV+D GKHKE R+NP 
Sbjct: 927  ILPLHSLLAPTDQRKVFQSPPENIRKIIVATDIAETSITIDDVIYVVDTGKHKENRYNPQ 986

Query: 1596 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICFCLYTHHRFDNLMHPYQAPEMLRMPLVEL 1775
            KK+SS+VEDWIS             VKPG+CFCLYT HRF+ +M P+Q PEMLRMPL EL
Sbjct: 987  KKMSSIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFEKMMRPFQVPEMLRMPLTEL 1046

Query: 1776 CLQVKSLSLGFVKPFLTKAIEPPREEAMTSALSVLYMVGAIEGDEKLTPLGYHLAKLPVD 1955
            CLQ+KSL LG +K FL KAIEPP+EEA++SA+ +LY VGA EG E+L+PLGYHLAKLPVD
Sbjct: 1047 CLQIKSLHLGGIKSFLLKAIEPPKEEAISSAIDLLYQVGAFEGHEELSPLGYHLAKLPVD 1106

Query: 1956 VLIGKMMIYGGMFCCLSPILSISAFLSYKSPFAHAKEERQHVQIAKQSLLGDKVDGFRNG 2135
            VLIGKMM+YG +F CLSPILS++AFLSYKSPF   K+E+Q+V+ AK SL+ + +DG  + 
Sbjct: 1107 VLIGKMMLYGAIFGCLSPILSVAAFLSYKSPFISPKDEKQNVEKAKASLMNENLDGSAST 1166

Query: 2136 GD-MQSDHIIMVVAYNKWAKILHEKGAKAAQXXXXXXXXXXXVMYMIRDMRIQFGSLLAD 2312
             D  QSDH++MV+AYNKW++IL E GA++A            VMYM+RDMR+Q+G+LLAD
Sbjct: 1167 ADNKQSDHLLMVIAYNKWSRILRENGARSAHQFCRSFYLNSTVMYMVRDMRLQYGTLLAD 1226

Query: 2313 IGFINLPKTF---KTGNMKDKLDHWFSDMTQSFNKYSHHSSVVKSILCAGLYPNVAVTAD 2483
            IG +++PK       G  K+ L+ WF++M+  FN Y+ +SSVVKS++CAGLYPNVA T +
Sbjct: 1227 IGLLDIPKDSLRPVDGMRKNTLESWFANMSLPFNLYARYSSVVKSVICAGLYPNVAATLE 1286

Query: 2484 GIVDVEFCRNLNSSSRSAGKGNLNWYDRRTKVQIHPSSINCNLKAVQYPFLVYLEKVETS 2663
            G VD         S   +GK    WYD R +V IHPSS+N +LKA QYPFLV+LEKVETS
Sbjct: 1287 G-VDPGALGGRKPSDFLSGKDRPRWYDGRREVHIHPSSMNHSLKAGQYPFLVFLEKVETS 1345

Query: 2664 SVFLRDTSVISPYSILLFGGSINVLHQTGLLTIDGWIKLTAPAQIAVLFKELRLTLHSVL 2843
             VFLRDTSVISPYS+LLFGG++ + HQTG++ IDGW++L A AQ AVLFK+LR+TL +VL
Sbjct: 1346 KVFLRDTSVISPYSLLLFGGTMVIQHQTGVVIIDGWLRLAAAAQTAVLFKQLRVTLDAVL 1405

Query: 2844 KELIKKPEKAT-VENEVIRSIVH 2909
            KELI+KPE AT V+NEV+RSI+H
Sbjct: 1406 KELIRKPEMATFVDNEVVRSIIH 1428


>ref|XP_002888226.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297334067|gb|EFH64485.1| helicase domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1458

 Score = 1177 bits (3045), Expect = 0.0
 Identities = 616/981 (62%), Positives = 737/981 (75%), Gaps = 13/981 (1%)
 Frame = +3

Query: 3    DAQNIVAAFALYRLFTEYPVDQLITEPYSSYAVKLMEGETPTRIEDSEETRRTSFVDXXX 182
            DAQN VAAFAL++LF++ PV   ITEPY+S  +   + E    I+ +EE RR +FVD   
Sbjct: 478  DAQNKVAAFALHKLFSDLPVHFAITEPYASLVLNWKQEELLCTIQSTEEDRRANFVDKLL 537

Query: 183  XXXXXXXXXXXXFGKTPGEAQVCEKI--------ESPSTAAKVERIRKMKNVLKVGESAS 338
                        F  T   + +   +        E           R  K+     E  S
Sbjct: 538  EEDN--------FSLTASSSSIDNALPLVDSYVKEKDDLGVVKSNHRARKDSYIEAECLS 589

Query: 339  LRHEQENKMGKAKYKEMLDARAALPIAEFRGDILRLLKENDALVVCGETGCGKTTQVPQF 518
            L+ +QENK    KYK+ML  R ALPI+E +  IL+ LKE D LVVCGETG GKTTQVPQF
Sbjct: 590  LQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQF 649

Query: 519  ILDDMIKAGLGGYCNIICTQPRRIAVMSVAERVADERCEPPPGSEGSLVGYQVRLDSARS 698
            ILDDMI +G GGYCNIICTQPRRIA +SVA+RVADERCE  PGS+ SLVGYQVRL+SARS
Sbjct: 650  ILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPGSDDSLVGYQVRLESARS 709

Query: 699  ERTKLLFCTTGILLRKLAGDKDLSDVTHVIVDEVHERTLLGDFLLIILKNLIEKQTARGT 878
            ++T+LLFCTTGILLRKLAGDK L+DVTH+IVDEVHER+LLGDFLLIILK LIEKQ+   T
Sbjct: 710  DKTRLLFCTTGILLRKLAGDKTLNDVTHIIVDEVHERSLLGDFLLIILKTLIEKQSCDNT 769

Query: 879  -RKLKVILMSATVDSTLFSRYFGDCPVLTAQGRTHPVSTYFLEDIYESLKYCLGSDSPAS 1055
             RKLKVILMSATVD+ LFSRYFG CPV+TAQGRTHPV+T+FLE+IYES+ Y L  DSPA+
Sbjct: 770  SRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAA 829

Query: 1056 LRHMTLRNEKFRSSTVDNRRGNRNLVLSSWGDDSLLSEDPVNPNYDPSLYESLSERTQEN 1235
            LR  +   EK  S  V++RRG +NLVL+ WGDD LLSED +NP Y  S Y S S++TQ+N
Sbjct: 830  LRSDSSIKEKLGS--VNDRRGKKNLVLAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQQN 887

Query: 1236 LKSLNEDVIDYELLEDLVCHVDETYPAGAMLIFLPGVAEIEMLLDRLLASYRFGGNSSDW 1415
            LK LNED IDYELLE+L+CH+D+T   GA+LIFLPGV+EI MLLDR+ ASYRF G ++DW
Sbjct: 888  LKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVSEIYMLLDRIAASYRFRGPAADW 947

Query: 1416 ILPLHSTLASVDQKKVFMSPPENIRKVIIATDIAETSITIDDVIYVIDCGKHKEQRFNPH 1595
            +LPLHS++AS +Q+KVF+ PP+ IRKVI AT+IAETSITIDDV+YVID GKHKE R+NP 
Sbjct: 948  LLPLHSSIASTEQRKVFLRPPKGIRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQ 1007

Query: 1596 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICFCLYTHHRFDNLMHPYQAPEMLRMPLVEL 1775
            KKLSSMVEDWIS             VKPGICF LYT +RF+ LM PYQ PEMLRMPLVEL
Sbjct: 1008 KKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVEL 1067

Query: 1776 CLQVKSLSLGFVKPFLTKAIEPPREEAMTSALSVLYMVGAIEGDEKLTPLGYHLAKLPVD 1955
            CLQ+K L LG +KPFL+KA+EPP E AMTSA+S+L+ VGA+EGDE+LTPLG+HLAKLPVD
Sbjct: 1068 CLQIKLLGLGHIKPFLSKALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVD 1127

Query: 1956 VLIGKMMIYGGMFCCLSPILSISAFLSYKSPFAHAKEERQHVQIAKQSLLGDKVDGFR-- 2129
            VLIGKM++YGG+F CLSPILSI+AFLSYKSPF + K+E+Q+V   K +LL D +      
Sbjct: 1128 VLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNLGSSSDL 1187

Query: 2130 NGGDMQSDHIIMVVAYNKWAKILHEKGAKAAQXXXXXXXXXXXVMYMIRDMRIQFGSLLA 2309
            N  D QSDH++M+VAY+KW KIL E+G  AAQ           VM MIRDMR+QFG+LLA
Sbjct: 1188 NNNDRQSDHLLMMVAYDKWVKILQERGMNAAQRFCESKFLSSSVMRMIRDMRVQFGTLLA 1247

Query: 2310 DIGFINLPKTFK-TGNMKDKLDHWFSDMTQSFNKYSHHSSVVKSILCAGLYPNVAVTADG 2486
            DIG INLPKT + +G  K+ LD WFSD TQ FN YS    VVK+ILCAGLYPN+A    G
Sbjct: 1248 DIGLINLPKTGEFSGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKG 1307

Query: 2487 IVDVEFCRNLNSSSRSAGKGNLNWYDRRTKVQIHPSSINCNLKAVQYPFLVYLEKVETSS 2666
            I +  F  N  +   +  K    WYD R +V IHPSSIN N KA QYPFLV+LEKVET+ 
Sbjct: 1308 ITETAF--NSLTKQGNQTKSYSAWYDGRREVHIHPSSINSNFKAFQYPFLVFLEKVETNK 1365

Query: 2667 VFLRDTSVISPYSILLFGGSINVLHQTGLLTIDGWIKLTAPAQIAVLFKELRLTLHSVLK 2846
            V+LRDT+V+SP+SILLFGGSINV HQ+G +TIDGW+K+ APAQ AVLFKELRLTLHS+LK
Sbjct: 1366 VYLRDTTVVSPFSILLFGGSINVHHQSGSVTIDGWLKVAAPAQTAVLFKELRLTLHSILK 1425

Query: 2847 ELIKKPEKA-TVENEVIRSIV 2906
            +LI+KPEK+  V NEVI+S+V
Sbjct: 1426 DLIRKPEKSGIVHNEVIKSMV 1446