BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002482
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putat...   107   1e-21
ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subs...   102   2e-20
ref|NP_001190388.1| ABC1 family protein [Arabidopsis thaliana] g...   102   4e-20
ref|NP_568458.1| ABC1 family protein [Arabidopsis thaliana] gi|1...   102   4e-20
ref|XP_003544660.1| PREDICTED: uncharacterized protein LOC100802...    97   2e-18

>ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
            gi|223532610|gb|EEF34396.1| Ubiquinone biosynthesis
            protein coq-8, putative [Ricinus communis]
          Length = 965

 Score =  107 bits (267), Expect = 1e-21
 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
 Frame = -3

Query: 360  GNVVGASKDTTKTGDHNNITCHKDGVNRIFHGPKVHDAFLGVGDYGSLALPDGAFGLGFV 181
            G+   ++ D+  +GD N     +D V RIF  P++HDAFLGVG+Y +LA+P+G FGLGF 
Sbjct: 826  GSSSASAADSFASGDGNK----RDNVTRIFIDPRIHDAFLGVGEYENLAVPNGKFGLGFR 881

Query: 180  RNCSKE-XXXXXXXXXXXXXXXFCDIKHKFSIAVLVNTISVGAVTGRIVQLVCSELNVPV 4
            RN S +                FCDIK++F+IAV VN +SVG VT +I +LVCSE+NVP+
Sbjct: 882  RNSSNDGSLIGFGHSGMGGSTGFCDIKNRFAIAVTVNKLSVGFVTRKIAELVCSEVNVPL 941

Query: 3    P 1
            P
Sbjct: 942  P 942


>ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297320062|gb|EFH50484.1| ABC1 family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1011

 Score =  102 bits (255), Expect = 2e-20
 Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
 Frame = -3

Query: 387  SASSHYEKRGNVVGASKDTTKTGDHNNITCHKDGVNRIFHGPKVHDAFLGVGDYGSLALP 208
            S  S+ E    +V  S    KT    N   H+  ++ +F  P +HDAF+G GDY  L +P
Sbjct: 863  SGESNTESLARLVDTSSYAGKT--EINSDDHQHDIHNLFSNPSIHDAFMGAGDYSGLVVP 920

Query: 207  DGAFGLGFVRNCSKEXXXXXXXXXXXXXXXF-CDIKHKFSIAVLVNTISVGAVTGRIVQL 31
            DG FGLGF R  S++                 CDIK++FSIAV +N +S+G VT +IV+L
Sbjct: 921  DGKFGLGFKRVISQDGSLVGFGHSGMGGSTGFCDIKNRFSIAVTLNKMSMGGVTAKIVKL 980

Query: 30   VCSELNVPVP 1
            VCSELN+P+P
Sbjct: 981  VCSELNIPLP 990


>ref|NP_001190388.1| ABC1 family protein [Arabidopsis thaliana]
            gi|332005982|gb|AED93365.1| ABC1 family protein
            [Arabidopsis thaliana]
          Length = 1040

 Score =  102 bits (253), Expect = 4e-20
 Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 3/132 (2%)
 Frame = -3

Query: 387  SASSHYEKRGNVVGASKDTTKTGDHNNITC--HKDGVNRIFHGPKVHDAFLGVGDYGSLA 214
            SASS  E     +    DT  +     I    H+  ++ +F  P++HDAF+G GDY  L 
Sbjct: 890  SASSSRESNTESLARLVDTNSSAGKTEINSDDHQHDIHNMFSNPRIHDAFMGAGDYSGLV 949

Query: 213  LPDGAFGLGFVRNCSKE-XXXXXXXXXXXXXXXFCDIKHKFSIAVLVNTISVGAVTGRIV 37
            +PDG FGLGF R  S++                FCDI ++FSIAV +N +S+G VT  IV
Sbjct: 950  VPDGKFGLGFKRAISQDGSLVGFGHSGLGGSTGFCDINNRFSIAVTLNKMSMGGVTANIV 1009

Query: 36   QLVCSELNVPVP 1
            +LVCSELN+P+P
Sbjct: 1010 KLVCSELNIPLP 1021


>ref|NP_568458.1| ABC1 family protein [Arabidopsis thaliana] gi|16649083|gb|AAL24393.1|
            Unknown protein [Arabidopsis thaliana]
            gi|33589758|gb|AAQ22645.1| At5g24810/F6A4.20 [Arabidopsis
            thaliana] gi|332005981|gb|AED93364.1| ABC1 family protein
            [Arabidopsis thaliana]
          Length = 1009

 Score =  102 bits (253), Expect = 4e-20
 Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 3/132 (2%)
 Frame = -3

Query: 387  SASSHYEKRGNVVGASKDTTKTGDHNNITC--HKDGVNRIFHGPKVHDAFLGVGDYGSLA 214
            SASS  E     +    DT  +     I    H+  ++ +F  P++HDAF+G GDY  L 
Sbjct: 859  SASSSRESNTESLARLVDTNSSAGKTEINSDDHQHDIHNMFSNPRIHDAFMGAGDYSGLV 918

Query: 213  LPDGAFGLGFVRNCSKE-XXXXXXXXXXXXXXXFCDIKHKFSIAVLVNTISVGAVTGRIV 37
            +PDG FGLGF R  S++                FCDI ++FSIAV +N +S+G VT  IV
Sbjct: 919  VPDGKFGLGFKRAISQDGSLVGFGHSGLGGSTGFCDINNRFSIAVTLNKMSMGGVTANIV 978

Query: 36   QLVCSELNVPVP 1
            +LVCSELN+P+P
Sbjct: 979  KLVCSELNIPLP 990


>ref|XP_003544660.1| PREDICTED: uncharacterized protein LOC100802638 [Glycine max]
          Length = 965

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 66/178 (37%), Positives = 84/178 (47%), Gaps = 40/178 (22%)
 Frame = -3

Query: 414  LGSNPHIPK-SASSHYEKRGNVVGASKDTTKT---------------------------- 322
            LGS+PHIPK S+S    K    +G  K  T T                            
Sbjct: 765  LGSHPHIPKLSSSPKPPKTRKCIGRRKQATSTSVSTTNSYEKVSSYDDSEANKGRNTNSE 824

Query: 321  ---GDH-------NNITCHKDGVNRIFHGPKVHDAFLGVGDYGSLALPDGAFGLGFVRNC 172
               GD        NN+  H  G  +++  P++ D FLG G+Y +LALP   FGLGF R  
Sbjct: 825  SSSGDDASSSRISNNLRSHVAG--KVYKNPRIIDEFLGTGEYTNLALPGEGFGLGFKRFT 882

Query: 171  SKEXXXXXXXXXXXXXXXF-CDIKHKFSIAVLVNTISVGAVTGRIVQLVCSELNVPVP 1
            SK+                 CD+ + FSIAV +N +S G VTG+IVQLVCSELN+PVP
Sbjct: 883  SKDGSSIAFGHSGMGGSTGFCDVTNNFSIAVTLNKMSFGGVTGKIVQLVCSELNIPVP 940