BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002474
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]   343   2e-92
ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|2235510...   313   2e-83
ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|2...   305   6e-81
ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 ...   303   3e-80
gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK3484...   301   9e-80

>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
          Length = 232

 Score =  343 bits (881), Expect = 2e-92
 Identities = 162/205 (79%), Positives = 176/205 (85%), Gaps = 11/205 (5%)
 Frame = +3

Query: 60  DAASFECNICFELAQDPIVTLCGHLFCWPCLYKWLHIHSHSQECPVCKAVVQEEKLVPLY 239
           DA +FECNICF+LAQDPIVTLCGHLFCWPCLYKWLHIHSHSQECPVCKA+V+EEKLVPLY
Sbjct: 27  DAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHIHSHSQECPVCKALVEEEKLVPLY 86

Query: 240 GRGKTPTDPRSKSIPGVNIPNRPSGQRPETAPPPDQNHFPHHGF-------GLAPMATAR 398
           GRGKT TDPRSKSIPG+NIPNRP+GQRPETAPPPD NHF  HGF       G APMATAR
Sbjct: 87  GRGKTSTDPRSKSIPGINIPNRPTGQRPETAPPPDANHFMQHGFGFMGGLGGFAPMATAR 146

Query: 399 IGNFTLSAAFGGLFPSIFNLQVHGFPD-TMYGGAAGYPYGFTNSFHGAHAPFFPQ-PANQ 572
            GNFTLSAAFGGLFPS+FNLQVHGFPD TMYG AAG+PYGF+NSFHG HA  FPQ P  Q
Sbjct: 147 FGNFTLSAAFGGLFPSLFNLQVHGFPDATMYGPAAGFPYGFSNSFHGGHAHGFPQHPPTQ 206

Query: 573 GPQTDY--KLLFLMVGIIFIIAMCY 641
           G Q DY  K+LFLM+G+  IIA+ +
Sbjct: 207 GQQADYYLKMLFLMIGVFVIIALIW 231


>ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|223551038|gb|EEF52524.1| rnf5,
           putative [Ricinus communis]
          Length = 229

 Score =  313 bits (803), Expect = 2e-83
 Identities = 147/203 (72%), Positives = 163/203 (80%), Gaps = 9/203 (4%)
 Frame = +3

Query: 60  DAASFECNICFELAQDPIVTLCGHLFCWPCLYKWLHIHSHSQECPVCKAVVQEEKLVPLY 239
           DA +FECNICF+LAQDPIVTLCGHLFCWPCLYKWLH HS S+ECPVCKA+V+EEKLVPLY
Sbjct: 26  DAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFHSQSKECPVCKALVEEEKLVPLY 85

Query: 240 GRGKTPTDPRSKSIPGVNIPNRPSGQRPETAPPPDQNHFPHHGF-------GLAPMATAR 398
           GRGKT TDPRSKSIPGVNIPNRP+GQRPETAPPP+ NHF  HGF       G APMATAR
Sbjct: 86  GRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFAQHGFGFMGGLGGFAPMATAR 145

Query: 399 IGNFTLSAAFGGLFPSIFNLQVHGFPD-TMYGGAAGYPYGFTNSFHGAHAPFFPQPANQG 575
            GNFTLSAAFGGL PS+FNLQVHGFPD  MYG A G+PYGF+NSFHG HA  + Q   QG
Sbjct: 146 FGNFTLSAAFGGLIPSLFNLQVHGFPDAAMYGTATGFPYGFSNSFHGGHAHGYHQHQGQG 205

Query: 576 PQTDY-KLLFLMVGIIFIIAMCY 641
            Q  Y K L   +G   ++A+ +
Sbjct: 206 QQDYYLKRLLFFIGFCVLLALIW 228


>ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|222844196|gb|EEE81743.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  305 bits (782), Expect = 6e-81
 Identities = 145/202 (71%), Positives = 159/202 (78%), Gaps = 8/202 (3%)
 Frame = +3

Query: 60  DAASFECNICFELAQDPIVTLCGHLFCWPCLYKWLHIHSHSQECPVCKAVVQEEKLVPLY 239
           DA +FECNICF+LAQDPIVTLCGHLFCWPCLYKWLH HS S+ECPVCKA+V+EEKLVPLY
Sbjct: 26  DAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFHSKSRECPVCKALVEEEKLVPLY 85

Query: 240 GRGKTPTDPRSKSIPGVNIPNRPSGQRPETAPPPDQNHFPHHGF-------GLAPMATAR 398
           GRGKT TDPRSKSIPGVNIPNRP+GQRPETAPPP+ NHF  HGF       G APMATAR
Sbjct: 86  GRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFGQHGFGFMGGLGGFAPMATAR 145

Query: 399 IGNFTLSAAFGGLFPSIFNLQVHGFPDTMYGGAAGYPYGFTNSFHGAHAPFFPQPANQGP 578
           +GNFT SAAFGGL PS+FNLQVHGFPD    G AGYPYGF NSFHG H   + Q   QG 
Sbjct: 146 LGNFTFSAAFGGLIPSLFNLQVHGFPDAAMYGPAGYPYGF-NSFHGGHPHGYRQHHGQGQ 204

Query: 579 QTDY-KLLFLMVGIIFIIAMCY 641
           Q  Y K L L +G    +A+ +
Sbjct: 205 QDYYLKRLLLFIGFCVFLALIW 226


>ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 isoform 1 [Glycine max]
           gi|356519064|ref|XP_003528194.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1 isoform 2 [Glycine max]
          Length = 231

 Score =  303 bits (776), Expect = 3e-80
 Identities = 139/205 (67%), Positives = 162/205 (79%), Gaps = 10/205 (4%)
 Frame = +3

Query: 60  DAASFECNICFELAQDPIVTLCGHLFCWPCLYKWLHIHSHSQECPVCKAVVQEEKLVPLY 239
           DAA+FECNICFELAQDPI+TLCGHLFCWPCLYKWLH HS S+ECPVCKA+V+EEKLVPLY
Sbjct: 26  DAANFECNICFELAQDPIITLCGHLFCWPCLYKWLHFHSQSRECPVCKALVEEEKLVPLY 85

Query: 240 GRGKTPTDPRSKSIPGVNIPNRPSGQRPETAPPPDQNHFPHHGFGL---------APMAT 392
           GRGK+ TDPRSKSIPGVNIP+RP+GQRPETAPPP+ NHF  HGFG           PMAT
Sbjct: 86  GRGKSSTDPRSKSIPGVNIPHRPAGQRPETAPPPETNHFHQHGFGFMGGLGGFVPPPMAT 145

Query: 393 ARIGNFTLSAAFGGLFPSIFNLQVHGFPD-TMYGGAAGYPYGFTNSFHGAHAPFFPQPAN 569
            R GNF LSAAFGG  PS+FN Q+HGF D  MYGG AG+P+GF N+FHG HA  FP   +
Sbjct: 146 TRFGNFALSAAFGGFIPSLFNFQMHGFHDAAMYGGGAGFPHGFANTFHGVHAHGFPLRTH 205

Query: 570 QGPQTDYKLLFLMVGIIFIIAMCYL 644
           QG Q DY L  L++ ++F + + ++
Sbjct: 206 QG-QQDYYLKKLLLFVVFCVVLAFI 229


>gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK34841.1| unknown
           [Lotus japonicus]
          Length = 228

 Score =  301 bits (772), Expect = 9e-80
 Identities = 139/203 (68%), Positives = 161/203 (79%), Gaps = 8/203 (3%)
 Frame = +3

Query: 60  DAASFECNICFELAQDPIVTLCGHLFCWPCLYKWLHIHSHSQECPVCKAVVQEEKLVPLY 239
           DA +FECNICF+LAQDPI+TLCGHLFCWPCLYKWLH HS S+ECPVCKA+V+EEKLVPLY
Sbjct: 25  DAGNFECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHSQSRECPVCKALVEEEKLVPLY 84

Query: 240 GRGKTPTDPRSKSIPGVNIPNRPSGQRPETAPPPDQNHFPHHGF-------GLAPMATAR 398
           GRGKT +DPRS+SIPGVNIP+RP+GQRPETAPPP+ N F HHGF       G AP ATAR
Sbjct: 85  GRGKTSSDPRSRSIPGVNIPHRPAGQRPETAPPPEPNPFAHHGFGFTGGLGGFAPAATAR 144

Query: 399 IGNFTLSAAFGGLFPSIFNLQVHGFPD-TMYGGAAGYPYGFTNSFHGAHAPFFPQPANQG 575
            GNFTLSAAFGG  PS+FN Q+HGF   TMYGGA G+PYGF+NSFHG H   +P    QG
Sbjct: 145 FGNFTLSAAFGGFIPSLFNFQLHGFHGATMYGGAPGFPYGFSNSFHGGHVHRYPLHTGQG 204

Query: 576 PQTDYKLLFLMVGIIFIIAMCYL 644
            Q DY L  L+  +IF + + ++
Sbjct: 205 -QQDYYLKRLLFFVIFCVVLAFI 226