BLASTX nr result

ID: Coptis24_contig00002465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002465
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH56540.1| hypothetical protein [Ricinus communis]                77   5e-22
ref|XP_002276336.1| PREDICTED: uncharacterized protein LOC100262...    77   4e-19
ref|XP_003551970.1| PREDICTED: uncharacterized protein LOC100798...    68   1e-16
ref|XP_002522397.1| conserved hypothetical protein [Ricinus comm...    54   3e-11
gb|AAM63020.1| unknown [Arabidopsis thaliana]                          64   4e-08

>emb|CAH56540.1| hypothetical protein [Ricinus communis]
          Length = 180

 Score = 77.4 bits (189), Expect(2) = 5e-22
 Identities = 55/119 (46%), Positives = 62/119 (52%), Gaps = 16/119 (13%)
 Frame = -1

Query: 772 EEEVESKRHNXXXXXXSYNQILSLLEEDEEEPTQDLSSLITTLQQEIS---SDHVTEQNL 602
           E+  ESKRH        YNQILSLLEE+EEEPTQD+SSLITTLQQE+    S   TE   
Sbjct: 17  EDVEESKRHKS------YNQILSLLEEEEEEPTQDISSLITTLQQELDDPLSCPSTETGR 70

Query: 601 E-------------XXXXXXXXXXXXXXXXXXXXXXXXERVIRHLLEASDDELGIPNSD 464
           E                                     +RVIRHLLEASDDELGIPN++
Sbjct: 71  ESPFATITSAIEDYPSSSSSSSSSSSSMLLKEDEEDDKDRVIRHLLEASDDELGIPNTE 129



 Score = 53.5 bits (127), Expect(2) = 5e-22
 Identities = 24/35 (68%), Positives = 27/35 (77%)
 Frame = -3

Query: 341 DGGSGSFEFALCDGLWEFEDETANYYTLLQSELFL 237
           +G SG   F+LCDGLWE ED  ANYY LLQSELF+
Sbjct: 146 NGFSGVDGFSLCDGLWEIEDANANYYALLQSELFM 180


>ref|XP_002276336.1| PREDICTED: uncharacterized protein LOC100262017 [Vitis vinifera]
          Length = 169

 Score = 76.6 bits (187), Expect(2) = 4e-19
 Identities = 56/128 (43%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
 Frame = -1

Query: 784 EDDDEEEVESKRHNXXXXXXSYNQILSLLEEDEEEPTQDLSSLITTLQQEISSDH----- 620
           E+   EE +SKRH        YN ILS+L+ DEEEPTQDLSSLITTLQQE+SSD      
Sbjct: 11  EETHVEEEDSKRHKS------YNHILSILDADEEEPTQDLSSLITTLQQELSSDSSFDPV 64

Query: 619 ---VTEQNLEXXXXXXXXXXXXXXXXXXXXXXXXER--------VIRHLLEASDDELGIP 473
               +E + E                        +          IRHLLEASDDELGIP
Sbjct: 65  QCPASEGDAENSITASATLECTSSSSSSSTLVLLKEGEEEDKEGFIRHLLEASDDELGIP 124

Query: 472 NSDDVRVN 449
           N  +VRV+
Sbjct: 125 NR-EVRVD 131



 Score = 44.3 bits (103), Expect(2) = 4e-19
 Identities = 23/40 (57%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
 Frame = -3

Query: 344 VDGGSGSFE----FALCDGLWEFEDETANYYTLLQSELFL 237
           VD G   F     F L + LWE EDE AN+YTLLQSELF+
Sbjct: 130 VDDGEYGFHDGDLFCLGNVLWELEDEAANFYTLLQSELFM 169


>ref|XP_003551970.1| PREDICTED: uncharacterized protein LOC100798289 [Glycine max]
          Length = 184

 Score = 67.8 bits (164), Expect(2) = 1e-16
 Identities = 51/119 (42%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
 Frame = -1

Query: 766 EVESKRHNXXXXXXSYNQILSLLEEDEEEPTQDLSSLITTLQQEIS----------SDH- 620
           E  SKRH        YN ILSLLE +EE+ TQDLS LIT LQQEI+          S H 
Sbjct: 30  ESSSKRH------MPYNHILSLLESEEEDSTQDLSPLITALQQEITNCANDSDTLLSQHN 83

Query: 619 ------VTEQNLEXXXXXXXXXXXXXXXXXXXXXXXXERVIRHLLEASDDELGIPNSDD 461
                  T  NLE                          V+RHLLEASDDELGIPN +D
Sbjct: 84  LTNTTTTTNNNLESCSSSTTQYSSNMVEEHDDKEG----VMRHLLEASDDELGIPNKED 138



 Score = 44.7 bits (104), Expect(2) = 1e-16
 Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
 Frame = -3

Query: 350 YGVDG---GSGSFEFALCDGL-WEFEDETANYYTLLQSELFL 237
           +G DG     G    + CDGL W+ EDE ANYY LLQS+LFL
Sbjct: 143 HGEDGFNFNGGDMFSSFCDGLLWDLEDEAANYYDLLQSQLFL 184


>ref|XP_002522397.1| conserved hypothetical protein [Ricinus communis]
           gi|223538282|gb|EEF39889.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 53.5 bits (127), Expect(2) = 3e-11
 Identities = 24/35 (68%), Positives = 27/35 (77%)
 Frame = -3

Query: 341 DGGSGSFEFALCDGLWEFEDETANYYTLLQSELFL 237
           +G SG   F+LCDGLWE ED  ANYY LLQSELF+
Sbjct: 49  NGFSGVDGFSLCDGLWEIEDANANYYALLQSELFM 83



 Score = 40.8 bits (94), Expect(2) = 3e-11
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = -1

Query: 523 RVIRHLLEASDDELGIPNSD 464
           RVIRHLLEASDDELGIPN++
Sbjct: 13  RVIRHLLEASDDELGIPNTE 32


>gb|AAM63020.1| unknown [Arabidopsis thaliana]
          Length = 177

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
 Frame = -1

Query: 781 DDDEEEV-----ESKRHNXXXXXXSYNQILSLLEEDEEEPTQDLSSLITTLQQEISSDH- 620
           D+ E+E+     E+KR        SYNQ+L+LLE++ E    D++SLITTLQQEIS++  
Sbjct: 16  DEQEQEIIKTQEETKRQKPSSSSSSYNQVLTLLEDEAEN---DITSLITTLQQEISNEEQ 72

Query: 619 ---VTEQNLEXXXXXXXXXXXXXXXXXXXXXXXXERVIRHLLEASDDELGIPNSD 464
              V E+N                          E+V++HLLEA+DDELGIPN++
Sbjct: 73  NAAVFEEN-PSLSSSCSSSSSSCTSKEDEYEGDKEKVMKHLLEATDDELGIPNTE 126


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