BLASTX nr result
ID: Coptis24_contig00002465
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002465 (784 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAH56540.1| hypothetical protein [Ricinus communis] 77 5e-22 ref|XP_002276336.1| PREDICTED: uncharacterized protein LOC100262... 77 4e-19 ref|XP_003551970.1| PREDICTED: uncharacterized protein LOC100798... 68 1e-16 ref|XP_002522397.1| conserved hypothetical protein [Ricinus comm... 54 3e-11 gb|AAM63020.1| unknown [Arabidopsis thaliana] 64 4e-08 >emb|CAH56540.1| hypothetical protein [Ricinus communis] Length = 180 Score = 77.4 bits (189), Expect(2) = 5e-22 Identities = 55/119 (46%), Positives = 62/119 (52%), Gaps = 16/119 (13%) Frame = -1 Query: 772 EEEVESKRHNXXXXXXSYNQILSLLEEDEEEPTQDLSSLITTLQQEIS---SDHVTEQNL 602 E+ ESKRH YNQILSLLEE+EEEPTQD+SSLITTLQQE+ S TE Sbjct: 17 EDVEESKRHKS------YNQILSLLEEEEEEPTQDISSLITTLQQELDDPLSCPSTETGR 70 Query: 601 E-------------XXXXXXXXXXXXXXXXXXXXXXXXERVIRHLLEASDDELGIPNSD 464 E +RVIRHLLEASDDELGIPN++ Sbjct: 71 ESPFATITSAIEDYPSSSSSSSSSSSSMLLKEDEEDDKDRVIRHLLEASDDELGIPNTE 129 Score = 53.5 bits (127), Expect(2) = 5e-22 Identities = 24/35 (68%), Positives = 27/35 (77%) Frame = -3 Query: 341 DGGSGSFEFALCDGLWEFEDETANYYTLLQSELFL 237 +G SG F+LCDGLWE ED ANYY LLQSELF+ Sbjct: 146 NGFSGVDGFSLCDGLWEIEDANANYYALLQSELFM 180 >ref|XP_002276336.1| PREDICTED: uncharacterized protein LOC100262017 [Vitis vinifera] Length = 169 Score = 76.6 bits (187), Expect(2) = 4e-19 Identities = 56/128 (43%), Positives = 66/128 (51%), Gaps = 16/128 (12%) Frame = -1 Query: 784 EDDDEEEVESKRHNXXXXXXSYNQILSLLEEDEEEPTQDLSSLITTLQQEISSDH----- 620 E+ EE +SKRH YN ILS+L+ DEEEPTQDLSSLITTLQQE+SSD Sbjct: 11 EETHVEEEDSKRHKS------YNHILSILDADEEEPTQDLSSLITTLQQELSSDSSFDPV 64 Query: 619 ---VTEQNLEXXXXXXXXXXXXXXXXXXXXXXXXER--------VIRHLLEASDDELGIP 473 +E + E + IRHLLEASDDELGIP Sbjct: 65 QCPASEGDAENSITASATLECTSSSSSSSTLVLLKEGEEEDKEGFIRHLLEASDDELGIP 124 Query: 472 NSDDVRVN 449 N +VRV+ Sbjct: 125 NR-EVRVD 131 Score = 44.3 bits (103), Expect(2) = 4e-19 Identities = 23/40 (57%), Positives = 26/40 (65%), Gaps = 4/40 (10%) Frame = -3 Query: 344 VDGGSGSFE----FALCDGLWEFEDETANYYTLLQSELFL 237 VD G F F L + LWE EDE AN+YTLLQSELF+ Sbjct: 130 VDDGEYGFHDGDLFCLGNVLWELEDEAANFYTLLQSELFM 169 >ref|XP_003551970.1| PREDICTED: uncharacterized protein LOC100798289 [Glycine max] Length = 184 Score = 67.8 bits (164), Expect(2) = 1e-16 Identities = 51/119 (42%), Positives = 56/119 (47%), Gaps = 17/119 (14%) Frame = -1 Query: 766 EVESKRHNXXXXXXSYNQILSLLEEDEEEPTQDLSSLITTLQQEIS----------SDH- 620 E SKRH YN ILSLLE +EE+ TQDLS LIT LQQEI+ S H Sbjct: 30 ESSSKRH------MPYNHILSLLESEEEDSTQDLSPLITALQQEITNCANDSDTLLSQHN 83 Query: 619 ------VTEQNLEXXXXXXXXXXXXXXXXXXXXXXXXERVIRHLLEASDDELGIPNSDD 461 T NLE V+RHLLEASDDELGIPN +D Sbjct: 84 LTNTTTTTNNNLESCSSSTTQYSSNMVEEHDDKEG----VMRHLLEASDDELGIPNKED 138 Score = 44.7 bits (104), Expect(2) = 1e-16 Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 4/42 (9%) Frame = -3 Query: 350 YGVDG---GSGSFEFALCDGL-WEFEDETANYYTLLQSELFL 237 +G DG G + CDGL W+ EDE ANYY LLQS+LFL Sbjct: 143 HGEDGFNFNGGDMFSSFCDGLLWDLEDEAANYYDLLQSQLFL 184 >ref|XP_002522397.1| conserved hypothetical protein [Ricinus communis] gi|223538282|gb|EEF39889.1| conserved hypothetical protein [Ricinus communis] Length = 83 Score = 53.5 bits (127), Expect(2) = 3e-11 Identities = 24/35 (68%), Positives = 27/35 (77%) Frame = -3 Query: 341 DGGSGSFEFALCDGLWEFEDETANYYTLLQSELFL 237 +G SG F+LCDGLWE ED ANYY LLQSELF+ Sbjct: 49 NGFSGVDGFSLCDGLWEIEDANANYYALLQSELFM 83 Score = 40.8 bits (94), Expect(2) = 3e-11 Identities = 18/20 (90%), Positives = 20/20 (100%) Frame = -1 Query: 523 RVIRHLLEASDDELGIPNSD 464 RVIRHLLEASDDELGIPN++ Sbjct: 13 RVIRHLLEASDDELGIPNTE 32 >gb|AAM63020.1| unknown [Arabidopsis thaliana] Length = 177 Score = 63.9 bits (154), Expect = 4e-08 Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 9/115 (7%) Frame = -1 Query: 781 DDDEEEV-----ESKRHNXXXXXXSYNQILSLLEEDEEEPTQDLSSLITTLQQEISSDH- 620 D+ E+E+ E+KR SYNQ+L+LLE++ E D++SLITTLQQEIS++ Sbjct: 16 DEQEQEIIKTQEETKRQKPSSSSSSYNQVLTLLEDEAEN---DITSLITTLQQEISNEEQ 72 Query: 619 ---VTEQNLEXXXXXXXXXXXXXXXXXXXXXXXXERVIRHLLEASDDELGIPNSD 464 V E+N E+V++HLLEA+DDELGIPN++ Sbjct: 73 NAAVFEEN-PSLSSSCSSSSSSCTSKEDEYEGDKEKVMKHLLEATDDELGIPNTE 126