BLASTX nr result
ID: Coptis24_contig00002459
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00002459
(1818 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325009.1| predicted protein [Populus trichocarpa] gi|2... 253 2e-64
ref|XP_002280712.1| PREDICTED: uncharacterized protein LOC100262... 248 3e-63
ref|XP_002514263.1| elongation factor ts, putative [Ricinus comm... 243 2e-61
ref|XP_003534213.1| PREDICTED: uncharacterized protein LOC100804... 231 6e-58
ref|XP_003516475.1| PREDICTED: uncharacterized protein LOC100797... 230 1e-57
>ref|XP_002325009.1| predicted protein [Populus trichocarpa] gi|222866443|gb|EEF03574.1|
predicted protein [Populus trichocarpa]
Length = 976
Score = 253 bits (645), Expect = 2e-64
Identities = 132/213 (61%), Positives = 163/213 (76%), Gaps = 4/213 (1%)
Frame = +2
Query: 1190 PISKESFEDSGNMRKSVMPPVENEELVPGATFTGKVRSIQRFGAFVDIGAFTEGLIHISN 1369
P +S G+ RKS MPPV+NE+LVPGATFTGKVRSIQ FGAFVD GAFT+GL+H+S
Sbjct: 121 PAPAQSSRSKGS-RKSEMPPVKNEDLVPGATFTGKVRSIQPFGAFVDFGAFTDGLVHVSK 179
Query: 1370 ISDSFVTDVKDILSIGQEVKVRVLEVSFKPGRISLTLRDSNDSGDLHQVKGSSFDGSGNN 1549
+SDSFV DV ++S+GQEVKVR++E + + GRISLT+R+++D+ Q S GS N
Sbjct: 180 LSDSFVKDVGSVVSVGQEVKVRLVEANTETGRISLTMRENDDTSKFQQRNDSPATGSSNR 239
Query: 1550 QRPERKKAINSQK----KSSKFVKGQELVGTVKNLTRVGAFLSLPEGEEGFLPISEESDE 1717
Q R + +Q+ KSSKFVKGQ L GTVKNLTR GAF+SLPEGEEGFLP SEESD+
Sbjct: 240 QAARRNTSKPNQRKDEVKSSKFVKGQNLEGTVKNLTRSGAFISLPEGEEGFLPRSEESDD 299
Query: 1718 VTVNVLGGSSLQVGEEVSVRVLHVTKGQVTLTM 1816
V ++G SSLQ+G+EVSVRVL +T+GQVTLTM
Sbjct: 300 VFAGMMGDSSLQIGQEVSVRVLRITRGQVTLTM 332
Score = 188 bits (477), Expect = 5e-45
Identities = 124/303 (40%), Positives = 162/303 (53%), Gaps = 8/303 (2%)
Frame = +2
Query: 323 MGPVVPFCVGNITCFPGTICVAKTNERVAEHNYSGSFKDHALSFQNFLLPRSASVRLVST 502
M PV+P NI PGT N + + S +A S Q +LP V+L
Sbjct: 1 MTPVLPCSTSNICLIPGTAFSINKNNSLKNGSLSRKSTKYASSSQRLVLPLPGFVKLFPQ 60
Query: 503 YRRWSAVQVQRKSRIPFLATNGTEMAVKE----VSAVSSEDTSEIFEDLSDVVISETPSV 670
Y R A+ +S ++ GT++AV+E V S+ SEI D + + S T +
Sbjct: 61 YHRDCAMV--HRSVAHAVSATGTDVAVEEPDSPVVDKDSDGVSEIPADAVETIDSSTKAG 118
Query: 671 TSDAHTKQNVKSNRRRPLRKSVMPPVKNEELVPGATFIGKVRSVQHFGAFVDIGAFTEGL 850
+S A + S+R + RKS MPPVKNE+LVPGATF GKVRS+Q FGAFVD GAFT+GL
Sbjct: 119 SSPAPAQ----SSRSKGSRKSEMPPVKNEDLVPGATFTGKVRSIQPFGAFVDFGAFTDGL 174
Query: 851 IHISNLSDSFVTAAKDIVSIGQXXXXXXXXXXXXXGRISLTMRGSNDSNDLQQMKDSSAD 1030
+H+S LSDSFV +VS+GQ GRISLTMR ++D++ QQ DS A
Sbjct: 175 VHVSKLSDSFVKDVGSVVSVGQEVKVRLVEANTETGRISLTMRENDDTSKFQQRNDSPAT 234
Query: 1031 NSGNKQRPARKEA----ISSEQKSVKFVKGRELKRTXXXXXXXXXXXXLPKREERFLPIS 1198
S N+Q R + E KS KFVKG+ L+ T LP+ EE FLP S
Sbjct: 235 GSSNRQAARRNTSKPNQRKDEVKSSKFVKGQNLEGTVKNLTRSGAFISLPEGEEGFLPRS 294
Query: 1199 KES 1207
+ES
Sbjct: 295 EES 297
>ref|XP_002280712.1| PREDICTED: uncharacterized protein LOC100262932 [Vitis vinifera]
Length = 1135
Score = 248 bits (634), Expect = 3e-63
Identities = 130/202 (64%), Positives = 160/202 (79%), Gaps = 6/202 (2%)
Frame = +2
Query: 1229 RKSVMPPVENEELVPGATFTGKVRSIQRFGAFVDIGAFTEGLIHISNISDSFVTDVKDIL 1408
RKS MPPV+NEELVPGATFTGKV+SIQ FGAF+D GAFT+GL+H+S +SDS+V DV +I+
Sbjct: 132 RKSEMPPVKNEELVPGATFTGKVKSIQPFGAFIDFGAFTDGLVHVSRLSDSYVKDVGNIV 191
Query: 1409 SIGQEVKVRVLEVSFKPGRISLTLRDSNDSGDLHQVKGSSFDGSGNNQRPERKKAINSQ- 1585
SIGQEVKVR++E + + GRISLT+RDS+D Q K ++ S + RP R+ S
Sbjct: 192 SIGQEVKVRLVEANTETGRISLTMRDSDDPTKPQQQKDAA--SSSDKPRPSRRNTQRSNQ 249
Query: 1586 -----KKSSKFVKGQELVGTVKNLTRVGAFLSLPEGEEGFLPISEESDEVTVNVLGGSSL 1750
KK+SKFVKGQ+L GTVKNL R GAF+SLPEGEEGFLP SEE+DE N++GGSSL
Sbjct: 250 RRDEVKKTSKFVKGQDLEGTVKNLNRAGAFISLPEGEEGFLPTSEEADEGFGNLMGGSSL 309
Query: 1751 QVGEEVSVRVLHVTKGQVTLTM 1816
QVG+EVSVRVL +++GQVTLTM
Sbjct: 310 QVGQEVSVRVLRISRGQVTLTM 331
Score = 216 bits (549), Expect = 2e-53
Identities = 138/309 (44%), Positives = 177/309 (57%), Gaps = 7/309 (2%)
Frame = +2
Query: 323 MGPVVPFCVGNITCFPGTICVAKTNERVAEHNYSGSFKDHALSFQNFLLPRSASVRLVST 502
M PV+P + NI+ GT + N + G LS Q FLLP S SVRL
Sbjct: 1 MTPVIPSSISNISLISGTAFTSNKNNCLTRCYLLGKSTKQTLSPQRFLLPLSTSVRLFPQ 60
Query: 503 YRRWSAVQVQRKSRIPFLATNGTEMAVKEVSAVSSEDTSEIFEDLSDVV-ISETPSVTSD 679
YR S + RKSR L+ GT++AV++ + ++ED+S E SD SE PS+ SD
Sbjct: 61 YR--SGCTLHRKSRTHILSATGTDVAVEQSDSPATEDSSGAPEVPSDSAEASEEPSIKSD 118
Query: 680 AHTKQNVKSNRRRPLRKSVMPPVKNEELVPGATFIGKVRSVQHFGAFVDIGAFTEGLIHI 859
+ + R RP RKS MPPVKNEELVPGATF GKV+S+Q FGAF+D GAFT+GL+H+
Sbjct: 119 GGVTSS-QPKRARP-RKSEMPPVKNEELVPGATFTGKVKSIQPFGAFIDFGAFTDGLVHV 176
Query: 860 SNLSDSFVTAAKDIVSIGQXXXXXXXXXXXXXGRISLTMRGSNDSNDLQQMKDSSADNSG 1039
S LSDS+V +IVSIGQ GRISLTMR S+D QQ KD A +S
Sbjct: 177 SRLSDSYVKDVGNIVSIGQEVKVRLVEANTETGRISLTMRDSDDPTKPQQQKD--AASSS 234
Query: 1040 NKQRPARKEAISSEQ------KSVKFVKGRELKRTXXXXXXXXXXXXLPKREERFLPISK 1201
+K RP+R+ S Q K+ KFVKG++L+ T LP+ EE FLP S+
Sbjct: 235 DKPRPSRRNTQRSNQRRDEVKKTSKFVKGQDLEGTVKNLNRAGAFISLPEGEEGFLPTSE 294
Query: 1202 ESFEDSGNM 1228
E+ E GN+
Sbjct: 295 EADEGFGNL 303
>ref|XP_002514263.1| elongation factor ts, putative [Ricinus communis]
gi|223546719|gb|EEF48217.1| elongation factor ts,
putative [Ricinus communis]
Length = 972
Score = 243 bits (619), Expect = 2e-61
Identities = 125/201 (62%), Positives = 155/201 (77%), Gaps = 5/201 (2%)
Frame = +2
Query: 1229 RKSVMPPVENEELVPGATFTGKVRSIQRFGAFVDIGAFTEGLIHISNISDSFVTDVKDIL 1408
RKS MPPV NEEL+PGATFTGKVRSIQ FGAFVD GAFT+GL+H+S +SD+FV DV +++
Sbjct: 136 RKSEMPPVTNEELIPGATFTGKVRSIQPFGAFVDFGAFTDGLVHVSRLSDNFVKDVGNVV 195
Query: 1409 SIGQEVKVRVLEVSFKPGRISLTLRDSNDSGDLHQVKGSSFDGSGNNQRPERKKAINS-- 1582
S+GQEV VR++E + + GRISLT+R+S+D+ Q + + S RP R+ A S
Sbjct: 196 SVGQEVTVRLVEANTETGRISLTMRESDDTNKSQQQRDAPATASSGKPRPGRRNAPKSGQ 255
Query: 1583 ---QKKSSKFVKGQELVGTVKNLTRVGAFLSLPEGEEGFLPISEESDEVTVNVLGGSSLQ 1753
K SKFVKGQEL GTVKNLTR G F+SLPEGEEGFLP SEESD +++GGSSL+
Sbjct: 256 RREDNKISKFVKGQELEGTVKNLTRSGTFISLPEGEEGFLPTSEESDGGLESMMGGSSLE 315
Query: 1754 VGEEVSVRVLHVTKGQVTLTM 1816
VG+EVSVRVL +++GQVTLTM
Sbjct: 316 VGQEVSVRVLRISRGQVTLTM 336
Score = 191 bits (486), Expect = 4e-46
Identities = 144/403 (35%), Positives = 195/403 (48%), Gaps = 11/403 (2%)
Frame = +2
Query: 323 MGPVVPFCVGNITCFPGTICVAKTNERVAEHNYSGSFKDHALSFQNFLLPRSASVRLVST 502
M VVP +I+ PGT K N + N H +S Q +LP SV L
Sbjct: 1 MTTVVPCSTSSISLIPGTPFRLKKNNNLTRCNLLRKSSKHVISSQRHVLPLLTSVGLFPH 60
Query: 503 YRRWSAVQVQRKSRIPFLATNGTEMAV------KEVSAVSSEDTSEIFEDLSDVVISETP 664
YRR +S + ++ GT+ V V+ +S S+I D ++ SE
Sbjct: 61 YRR--DCNWLHRSIVYGVSATGTDTDVVIEEPESPVTDENSGGASDIPADAAET--SENS 116
Query: 665 SVTSDAHTKQNVKSNRRRPLRKSVMPPVKNEELVPGATFIGKVRSVQHFGAFVDIGAFTE 844
S+ SD++ + ++ R RP RKS MPPV NEEL+PGATF GKVRS+Q FGAFVD GAFT+
Sbjct: 117 SIKSDSN-RAPAQTKRSRPGRKSEMPPVTNEELIPGATFTGKVRSIQPFGAFVDFGAFTD 175
Query: 845 GLIHISNLSDSFVTAAKDIVSIGQXXXXXXXXXXXXXGRISLTMRGSNDSNDLQQMKDSS 1024
GL+H+S LSD+FV ++VS+GQ GRISLTMR S+D+N QQ +D+
Sbjct: 176 GLVHVSRLSDNFVKDVGNVVSVGQEVTVRLVEANTETGRISLTMRESDDTNKSQQQRDAP 235
Query: 1025 ADNSGNKQRPARKEAISSEQ-----KSVKFVKGRELKRTXXXXXXXXXXXXLPKREERFL 1189
A S K RP R+ A S Q K KFVKG+EL+ T LP+ EE FL
Sbjct: 236 ATASSGKPRPGRRNAPKSGQRREDNKISKFVKGQELEGTVKNLTRSGTFISLPEGEEGFL 295
Query: 1190 PISKESFEDSGNMRKSVMPPVENEELVPGATFTGKVRSIQRFGAFVDIGAFTEGLIHISN 1369
P S+ES D G E ++ G++
Sbjct: 296 PTSEES--DGG-----------LESMMGGSS----------------------------- 313
Query: 1370 ISDSFVTDVKDILSIGQEVKVRVLEVSFKPGRISLTLRDSNDS 1498
L +GQEV VRVL +S G+++LT++ D+
Sbjct: 314 ------------LEVGQEVSVRVLRIS--RGQVTLTMKKEEDN 342
>ref|XP_003534213.1| PREDICTED: uncharacterized protein LOC100804285 [Glycine max]
Length = 1135
Score = 231 bits (588), Expect = 6e-58
Identities = 118/200 (59%), Positives = 158/200 (79%), Gaps = 4/200 (2%)
Frame = +2
Query: 1229 RKSVMPPVENEELVPGATFTGKVRSIQRFGAFVDIGAFTEGLIHISNISDSFVTDVKDIL 1408
RKS MPPV+NE+L+PGATFTGKV+S+Q FGAFVDIGAFT+GL+HIS +SDS+V DV ++
Sbjct: 129 RKSEMPPVKNEDLLPGATFTGKVKSVQPFGAFVDIGAFTDGLVHISMLSDSYVKDVASVV 188
Query: 1409 SIGQEVKVRVLEVSFKPGRISLTLRDSNDSG----DLHQVKGSSFDGSGNNQRPERKKAI 1576
S+GQEVKV+++EV+ + RISL++R++ D+G D + G NN +P KK
Sbjct: 189 SVGQEVKVKLIEVNTETQRISLSMRENVDTGKQRKDAPTKTEKAGPGKRNNSKPSPKK-- 246
Query: 1577 NSQKKSSKFVKGQELVGTVKNLTRVGAFLSLPEGEEGFLPISEESDEVTVNVLGGSSLQV 1756
++ KS+KF GQ+LVG+VKNL R GAF+SLPEGEEGFLP+SEE D+ NV+G ++L+V
Sbjct: 247 DNVTKSTKFAIGQQLVGSVKNLARSGAFISLPEGEEGFLPVSEEPDDGFDNVMGNTTLEV 306
Query: 1757 GEEVSVRVLHVTKGQVTLTM 1816
G+EV+VRVL +T+GQVTLTM
Sbjct: 307 GQEVNVRVLRITRGQVTLTM 326
Score = 176 bits (446), Expect = 2e-41
Identities = 133/390 (34%), Positives = 198/390 (50%), Gaps = 14/390 (3%)
Frame = +2
Query: 323 MGPVVPFCVGNITCFPGTICVAKTNERVAEHNYSGSFKDHALSFQNFLLPRSASVRLVST 502
M PV+P +GN++ PG + N + N S S S FLLP +
Sbjct: 1 MNPVIPCSIGNVSIIPGFTYSTRKNNTLTRLNLSRSTVKPGSSSWRFLLPSFVASGAFPQ 60
Query: 503 YRRWSAVQVQRKSRIPFLATNGTEMAVKEVSAVSSEDTSEIFEDLSDVVISETPSVTSDA 682
+R + +KSR AT T++AV+E V+ ED+ E+ ++V +SE SDA
Sbjct: 61 NKR--ILSFHKKSRTSISATE-TDVAVEEPGPVADEDSGEL--PSNEVGVSEDSFTKSDA 115
Query: 683 HTKQNVKSNRRRPLRKSVMPPVKNEELVPGATFIGKVRSVQHFGAFVDIGAFTEGLIHIS 862
+ K+ R RP RKS MPPVKNE+L+PGATF GKV+SVQ FGAFVDIGAFT+GL+HIS
Sbjct: 116 NPDP-AKARRSRPARKSEMPPVKNEDLLPGATFTGKVKSVQPFGAFVDIGAFTDGLVHIS 174
Query: 863 NLSDSFVTAAKDIVSIGQXXXXXXXXXXXXXGRISLTMRGSNDSNDLQQMKDSSADNSG- 1039
LSDS+V +VS+GQ RISL+MR + D+ ++ + + +G
Sbjct: 175 MLSDSYVKDVASVVSVGQEVKVKLIEVNTETQRISLSMRENVDTGKQRKDAPTKTEKAGP 234
Query: 1040 ---NKQRPARKEAISSEQKSVKFVKGRELKRTXXXXXXXXXXXXLPKREERFLPISKESF 1210
N +P+ K+ + KS KF G++L + LP+ EE FLP+S+E
Sbjct: 235 GKRNNSKPSPKK--DNVTKSTKFAIGQQLVGSVKNLARSGAFISLPEGEEGFLPVSEEPD 292
Query: 1211 EDSGNMRKSVMPPVENEELVPGATFT-GKV---RSIQRFGAFVDIGAFTEGLIHISNISD 1378
+ N+ + V E V T G+V + A +D F +G++H++ ++
Sbjct: 293 DGFDNVMGNTTLEVGQEVNVRVLRITRGQVTLTMKKEEDTAGLD-STFNQGVVHVA--TN 349
Query: 1379 SFVT------DVKDILSIGQEVKVRVLEVS 1450
FV D+ L ++ + VL+ S
Sbjct: 350 PFVVAFRKNKDIASFLDDREKTQTEVLKPS 379
>ref|XP_003516475.1| PREDICTED: uncharacterized protein LOC100797166 [Glycine max]
Length = 1133
Score = 230 bits (586), Expect = 1e-57
Identities = 117/200 (58%), Positives = 158/200 (79%), Gaps = 4/200 (2%)
Frame = +2
Query: 1229 RKSVMPPVENEELVPGATFTGKVRSIQRFGAFVDIGAFTEGLIHISNISDSFVTDVKDIL 1408
RKS MPPV+NE+L+PGATFTGKV+S+Q FGAFVDIGAFT+GL+HIS +SDS+V DV ++
Sbjct: 129 RKSEMPPVKNEDLIPGATFTGKVKSVQPFGAFVDIGAFTDGLVHISMLSDSYVKDVTSVV 188
Query: 1409 SIGQEVKVRVLEVSFKPGRISLTLRDSNDSG----DLHQVKGSSFDGSGNNQRPERKKAI 1576
S+GQEVKV+++EV+ + RISL++R++ D+G D + G N+ +P KK
Sbjct: 189 SVGQEVKVKLIEVNTETQRISLSMRENADTGKQRKDAPVKTEKAGPGKRNSSKPSSKK-- 246
Query: 1577 NSQKKSSKFVKGQELVGTVKNLTRVGAFLSLPEGEEGFLPISEESDEVTVNVLGGSSLQV 1756
++ KS+KF GQ+LVG+VKNL R GAF+SLPEGEEGFLP+SEE D+ NV+G ++L+V
Sbjct: 247 DNVTKSTKFAIGQQLVGSVKNLARSGAFISLPEGEEGFLPVSEEPDDGFDNVMGNTTLEV 306
Query: 1757 GEEVSVRVLHVTKGQVTLTM 1816
G+EV+VRVL +T+GQVTLTM
Sbjct: 307 GQEVNVRVLRITRGQVTLTM 326
Score = 173 bits (439), Expect = 1e-40
Identities = 113/304 (37%), Positives = 160/304 (52%), Gaps = 2/304 (0%)
Frame = +2
Query: 323 MGPVVPFCVGNITCFPGTICVAKTNERVAEHNYSGSFKDHALSFQNFLLPRSASVRLVST 502
M PV+P +GN++ P I + N + N S S S FLLP S
Sbjct: 1 MNPVIPCSIGNVSIIPVFIYSTRKNNTLTRFNLSRSTVKPGSSSWRFLLP---SFVASGA 57
Query: 503 YRRWSAVQVQRKSRIPFLATNGTEMAVKEVSAVSSEDTSEIFEDLSDVVISETPSVTSDA 682
+ + ++ K ++ T++ V+E S V+ ED+ EI + +V ISE S SDA
Sbjct: 58 FPQNKGIRSFHKKSSTSISATETDVTVEEPSPVADEDSGEITSN--EVGISEDSSSKSDA 115
Query: 683 HTKQNVKSNRRRPLRKSVMPPVKNEELVPGATFIGKVRSVQHFGAFVDIGAFTEGLIHIS 862
+ K R RP RKS MPPVKNE+L+PGATF GKV+SVQ FGAFVDIGAFT+GL+HIS
Sbjct: 116 NPDP-AKGRRSRPARKSEMPPVKNEDLIPGATFTGKVKSVQPFGAFVDIGAFTDGLVHIS 174
Query: 863 NLSDSFVTAAKDIVSIGQXXXXXXXXXXXXXGRISLTMRGSNDSNDLQQMKDSSADNSGN 1042
LSDS+V +VS+GQ RISL+MR + D+ ++ + +G
Sbjct: 175 MLSDSYVKDVTSVVSVGQEVKVKLIEVNTETQRISLSMRENADTGKQRKDAPVKTEKAGP 234
Query: 1043 KQRPARKEAISSEQ--KSVKFVKGRELKRTXXXXXXXXXXXXLPKREERFLPISKESFED 1216
+R + K + + KS KF G++L + LP+ EE FLP+S+E +
Sbjct: 235 GKRNSSKPSSKKDNVTKSTKFAIGQQLVGSVKNLARSGAFISLPEGEEGFLPVSEEPDDG 294
Query: 1217 SGNM 1228
N+
Sbjct: 295 FDNV 298