BLASTX nr result

ID: Coptis24_contig00002457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002457
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU76351.1| ethylene responsive factor, partial [Prunus persica]   235   6e-60
gb|ADE41104.1| AP2 domain class transcription factor [Malus x do...   232   5e-59
gb|ACM49847.1| ethylene responsive transcription factor 2a [Prun...   222   7e-56
gb|ADE41148.1| AP2 domain class transcription factor [Malus x do...   219   6e-55
gb|AFG26329.1| ethylene response factor ERF4 [Eriobotrya japonica]    217   2e-54

>gb|ADU76351.1| ethylene responsive factor, partial [Prunus persica]
          Length = 382

 Score =  235 bits (600), Expect = 6e-60
 Identities = 136/250 (54%), Positives = 158/250 (63%), Gaps = 16/250 (6%)
 Frame = -1

Query: 703 YSKPKRSEFIHHVDGYDFEADFQGFKDGSDTDEDHXXXXXXXXN-----PKSQDTSATVK 539
           +SKP R E I     +DFEADFQ FKD SD DED               P S   S TVK
Sbjct: 36  FSKPLRPEIIDL--DHDFEADFQEFKDESDVDEDDEMVEAKPSAFSAGKPSSARGSTTVK 93

Query: 538 NVEFNGPADKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXX 359
            VEFNG A+KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT         
Sbjct: 94  LVEFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYD 153

Query: 358 XXXXRIRGNKAKVNFPEH--KNSPARAVKANPQKALPTANHTLERPVFNQDFSLMNYSSD 185
               RIRG KAKVNFP+   ++S  R+VKANPQK LP  N    +P  NQ+ + +N  + 
Sbjct: 154 SEARRIRGKKAKVNFPDETPRSSAKRSVKANPQKMLPKTNTNAVQPNLNQNINFVNDPNQ 213

Query: 184 D---SLGFVEEKPLLMGSEF---FVSMKD---QTFTPSDGGTLCFTSDQGSNSLNCSDFG 32
           D   ++GF++EKP      F   F + +D   ++ TPSD   L F+SDQGSNS +CSDFG
Sbjct: 214 DYYNAMGFLDEKPATNNFGFMSTFPANEDVALKSSTPSDAVPLYFSSDQGSNSFDCSDFG 273

Query: 31  WGNQEPKTPE 2
           WG Q  KTPE
Sbjct: 274 WGEQGSKTPE 283


>gb|ADE41104.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 387

 Score =  232 bits (592), Expect = 5e-59
 Identities = 136/250 (54%), Positives = 156/250 (62%), Gaps = 16/250 (6%)
 Frame = -1

Query: 703 YSKPKRSEFIHHVDGYDFEADFQGFKDGSDTDEDHXXXXXXXXN-----PKSQDTSATVK 539
           +SKP RSE +   D  DFEADFQ FKD SD DED               P S   S  VK
Sbjct: 38  FSKPLRSEIVDLDD--DFEADFQEFKDESDVDEDDEMVDFKPSAFSAGKPSSARGSTAVK 95

Query: 538 NVEFNGPADKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXX 359
           +VEFNG A+KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT         
Sbjct: 96  SVEFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYD 155

Query: 358 XXXXRIRGNKAKVNFPEH--KNSPARAVKANPQKALPTANHTLERPVFNQDFSLMNYSSD 185
               RIRG KAKVNFPE   + S  R+VKAN QK +P  N        NQ+F+ +N SS 
Sbjct: 156 AEARRIRGKKAKVNFPEETPRASAKRSVKANSQKLIPKTNVNGTESNLNQNFNFVNDSSQ 215

Query: 184 D---SLGFVEEKPLLMGSEF---FVSMKD---QTFTPSDGGTLCFTSDQGSNSLNCSDFG 32
           D   +LGF++EKP L    +   F++  D   ++ TPSD      +SDQGSNS +CSDFG
Sbjct: 216 DYYSALGFLDEKPTLNNFGYMSTFLANGDVALKSSTPSDPAPFYLSSDQGSNSFDCSDFG 275

Query: 31  WGNQEPKTPE 2
           WG Q  KTPE
Sbjct: 276 WGEQGSKTPE 285


>gb|ACM49847.1| ethylene responsive transcription factor 2a [Prunus salicina]
          Length = 381

 Score =  222 bits (565), Expect = 7e-56
 Identities = 130/250 (52%), Positives = 154/250 (61%), Gaps = 16/250 (6%)
 Frame = -1

Query: 703 YSKPKRSEFIHHVDGYDFEADFQGFKDGSDTDEDHXXXXXXXXN-----PKSQDTSATVK 539
           +SKP R E +   D  DFEADFQ FKD SD DED               P S   S TVK
Sbjct: 36  FSKPLRPEIVGLGD--DFEADFQEFKDESDVDEDDEMVEAKPSAFSAGKPSSARGSTTVK 93

Query: 538 NVEFNGPADKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXX 359
           +VEFNG A+KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT         
Sbjct: 94  SVEFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYD 153

Query: 358 XXXXRIRGNKAKVNFPEH--KNSPARAVKANPQKALPTANHTLERPVFNQDFSLMNYSSD 185
               RIRG KAKVNFP+   ++S  R+VKA+ QK LP  N    +P  NQ+ + ++  + 
Sbjct: 154 SEARRIRGKKAKVNFPDETPRSSAKRSVKAS-QKMLPKTNMNAIQPNLNQNINFVHDPNQ 212

Query: 184 D---SLGFVEEKPLLMGSEFFVSMKD------QTFTPSDGGTLCFTSDQGSNSLNCSDFG 32
           D   ++GF++EKP      F  +         ++  PSD   L F+SDQGSNS +CSDFG
Sbjct: 213 DYYNAMGFLDEKPATNDFGFMSTFPANGEVVLKSSAPSDAVPLYFSSDQGSNSFDCSDFG 272

Query: 31  WGNQEPKTPE 2
           WG Q  KTPE
Sbjct: 273 WGEQGSKTPE 282


>gb|ADE41148.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 386

 Score =  219 bits (557), Expect = 6e-55
 Identities = 128/249 (51%), Positives = 153/249 (61%), Gaps = 16/249 (6%)
 Frame = -1

Query: 700 SKPKRSEFIHHVDGYDFEADFQGFKDGSDTDEDHXXXXXXXXN-----PKSQDTSATVKN 536
           SKP +SE +   D  DFEADFQ FKD SD  ED               P     S  VK+
Sbjct: 38  SKPLKSEIVDLDD--DFEADFQEFKDESDVGEDDEMVDSKPSAFSAGNPSFARGSTAVKS 95

Query: 535 VEFNGPADKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXX 356
           VEF+G A+KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT          
Sbjct: 96  VEFDGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDA 155

Query: 355 XXXRIRGNKAKVNFPEHK--NSPARAVKANPQKALPTANHTLERPVFNQDFSLMNYSSDD 182
              RIRG KAKVNFPE     S  R++K NPQK +   N    +   NQ+F+ +N SS+D
Sbjct: 156 EARRIRGKKAKVNFPEETPCASAKRSIKENPQKLIAKTNLNGTQSNPNQNFNFVNDSSED 215

Query: 181 ---SLGFVEEKPLLMGSEF---FVSMKD---QTFTPSDGGTLCFTSDQGSNSLNCSDFGW 29
              +LGF++EKP +    +   F + +D   ++  PS+     F+SDQGSNS +CSDFGW
Sbjct: 216 YYSALGFLDEKPTMNNFRYMSTFPANEDVALKSSVPSENAPFYFSSDQGSNSFDCSDFGW 275

Query: 28  GNQEPKTPE 2
           G Q  KTPE
Sbjct: 276 GEQGSKTPE 284


>gb|AFG26329.1| ethylene response factor ERF4 [Eriobotrya japonica]
          Length = 385

 Score =  217 bits (553), Expect = 2e-54
 Identities = 130/249 (52%), Positives = 153/249 (61%), Gaps = 16/249 (6%)
 Frame = -1

Query: 700 SKPKRSEFIHHVDGYDFEADFQGFKDGSDTDEDHXXXXXXXXN-----PKSQDTSATVKN 536
           SKP RSE +   D  DFEADFQ FKD SD DED               P S   S  VK+
Sbjct: 38  SKPLRSEIVDLDD--DFEADFQEFKDESDVDEDDEMVDSKPSAFSAGKPSSARGSTAVKS 95

Query: 535 VEFNGPADKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXX 356
           VEFNG A+KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT          
Sbjct: 96  VEFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDA 155

Query: 355 XXXRIRGNKAKVNFPEH--KNSPARAVKANPQKALPTANHTLERPVFNQDFSLMNYSSDD 182
              RIRG KAKVNFPE   + S  R++K NPQK +   N    +   NQ+F+ +N SS+D
Sbjct: 156 EARRIRGKKAKVNFPEETPRASAKRSIKENPQKLIAKTNLNGTQSNLNQNFNFVNDSSED 215

Query: 181 ---SLGFVEEKPLLMGSEF---FVSMKD---QTFTPSDGGTLCFTSDQGSNSLNCSDFGW 29
              +LGF++EKP +    +   F + +D   ++  PSD     F SD+GSN  +CSDFGW
Sbjct: 216 YYSALGFLDEKPTVNNFGYISTFPANEDVAPKSSVPSD-TPFHFGSDKGSNFFDCSDFGW 274

Query: 28  GNQEPKTPE 2
           G Q   TPE
Sbjct: 275 GEQGSNTPE 283


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