BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002448
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK38863.1|AF347640_1 translation initiation factor IF1 [Bora...   136   5e-30
sp|Q94KR8.1|IF1C_MESCR RecName: Full=Translation initiation fact...   136   6e-30
gb|ADD29843.1| translational initiation factor 1 protein [Berber...   135   1e-29
gb|ADD29847.1| translational initiation factor 1 protein [Heuche...   134   2e-29
ref|YP_007474764.1| translation initiation factor 1 (chloroplast...   134   2e-29

>gb|AAK38863.1|AF347640_1 translation initiation factor IF1 [Borago officinalis]
          Length = 84

 Score =  136 bits (343), Expect = 5e-30
 Identities = 65/77 (84%), Positives = 75/77 (97%)
 Frame = +2

Query: 425 GVKEEKWVQEGLITESLPNGMFRVKLDNQDLVLGHVSGRIRKSFVRILPGDRVRIEVSRY 604
           G+KEEKW+ EGLITESLPNGMFRV+LDN+DLVLG+VSG+IR+SF+RILPGDRV+IEVSRY
Sbjct: 7   GMKEEKWIHEGLITESLPNGMFRVRLDNEDLVLGYVSGKIRRSFIRILPGDRVKIEVSRY 66

Query: 605 DSTRGRIVYRLRNSKDS 655
           DSTRGRI+YRLRN KDS
Sbjct: 67  DSTRGRIIYRLRN-KDS 82


>sp|Q94KR8.1|IF1C_MESCR RecName: Full=Translation initiation factor IF-1, chloroplastic;
           Flags: Precursor gi|13774425|gb|AAK38869.1|AF347665_1
           translation initiation factor IF1 [Mesembryanthemum
           crystallinum]
          Length = 156

 Score =  136 bits (342), Expect = 6e-30
 Identities = 64/89 (71%), Positives = 80/89 (89%), Gaps = 1/89 (1%)
 Frame = +2

Query: 398 AGSSSKGVPGVKEEKWVQEGLITESLPNGMFRVKLDN-QDLVLGHVSGRIRKSFVRILPG 574
           A ++  G P V+E+KW+ EG+ITESLPNGMF VKLDN +DLVLG++SGRIR+SF+R+LPG
Sbjct: 67  AAATKGGSPSVQEQKWIHEGVITESLPNGMFWVKLDNCEDLVLGYISGRIRRSFIRVLPG 126

Query: 575 DRVRIEVSRYDSTRGRIVYRLRNSKDSST 661
           DRV+IEVSRYDSTRGRI YRLRN+KD++T
Sbjct: 127 DRVKIEVSRYDSTRGRITYRLRNNKDATT 155


>gb|ADD29843.1| translational initiation factor 1 protein [Berberidopsis corallina]
          Length = 77

 Score =  135 bits (340), Expect = 1e-29
 Identities = 64/77 (83%), Positives = 75/77 (97%)
 Frame = +2

Query: 428 VKEEKWVQEGLITESLPNGMFRVKLDNQDLVLGHVSGRIRKSFVRILPGDRVRIEVSRYD 607
           +KE+KW+ EGLITESLPNGMFRV+LDN+DL+LG+VSGRIR+SF+RILPGDRV+IEVSRYD
Sbjct: 1   MKEQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSRYD 60

Query: 608 STRGRIVYRLRNSKDSS 658
           STRGRI+YRLRN KDSS
Sbjct: 61  STRGRIIYRLRN-KDSS 76


>gb|ADD29847.1| translational initiation factor 1 protein [Heuchera sanguinea]
          Length = 77

 Score =  134 bits (338), Expect = 2e-29
 Identities = 64/77 (83%), Positives = 75/77 (97%)
 Frame = +2

Query: 428 VKEEKWVQEGLITESLPNGMFRVKLDNQDLVLGHVSGRIRKSFVRILPGDRVRIEVSRYD 607
           +KE+KWV EGLITESLPNGMFRV+LDN+DL+LG+VSGRIR+SF+RILPGDRV+IEVSRYD
Sbjct: 1   MKEQKWVHEGLITESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSRYD 60

Query: 608 STRGRIVYRLRNSKDSS 658
           STRGRI+YRLRN KDS+
Sbjct: 61  STRGRIIYRLRN-KDSN 76


>ref|YP_007474764.1| translation initiation factor 1 (chloroplast) [Chrysanthemum
           indicum] gi|372863241|gb|AEX99313.1| translation
           initiation factor 1 (chloroplast) [Chrysanthemum
           indicum] gi|372863480|gb|AEX99549.1| translation
           initiation factor 1 (chloroplast) [Chrysanthemum
           indicum]
          Length = 77

 Score =  134 bits (337), Expect = 2e-29
 Identities = 62/76 (81%), Positives = 74/76 (97%)
 Frame = +2

Query: 428 VKEEKWVQEGLITESLPNGMFRVKLDNQDLVLGHVSGRIRKSFVRILPGDRVRIEVSRYD 607
           +KE+KW+ EGLITESLPNGMFRV+LDN+D++LGHVSG+IR+SF+RILPGDRV+IEVSRYD
Sbjct: 1   MKEQKWIHEGLITESLPNGMFRVRLDNEDIILGHVSGKIRRSFIRILPGDRVKIEVSRYD 60

Query: 608 STRGRIVYRLRNSKDS 655
           STRGRI+YRLRN KDS
Sbjct: 61  STRGRIIYRLRN-KDS 75