BLASTX nr result

ID: Coptis24_contig00002398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002398
         (3150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265283.2| PREDICTED: putative transcription elongation...  1378   0.0  
ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis...  1377   0.0  
ref|XP_004148818.1| PREDICTED: putative transcription elongation...  1376   0.0  
ref|XP_003634397.1| PREDICTED: putative transcription elongation...  1368   0.0  
ref|XP_003526672.1| PREDICTED: putative transcription elongation...  1336   0.0  

>ref|XP_002265283.2| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like isoform 1 [Vitis vinifera]
            gi|302142757|emb|CBI19960.3| unnamed protein product
            [Vitis vinifera]
          Length = 1034

 Score = 1378 bits (3566), Expect = 0.0
 Identities = 700/959 (72%), Positives = 782/959 (81%), Gaps = 12/959 (1%)
 Frame = +2

Query: 50   FIDDEAIVXXXXXXXXXXXXXXXFIVNGAELXXXXXXXXXXXXXXXXXXXXQEDMEALER 229
            F+D EA V                +  GAEL                    QED EALER
Sbjct: 83   FLDLEAAVDSDEEEEEEDGEDDFIVDAGAELPDEDDGQRMRRRPLLPQEDEQEDFEALER 142

Query: 230  RIQERYARTDHGDFDEETTDVEQQALLPSVKDPKLWMVKCAIGHEREAAICLMQKSIDRG 409
            +IQERY ++ H ++DEETT+VEQQALLPSV+DPKLWMVKCAIGHEREAA+CLMQKSID+G
Sbjct: 143  KIQERYGKSSHAEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKSIDKG 202

Query: 410  PELQIRSAVALDHLKNYIYVEADKEAHVKEACKGLRNIYSAKVMLVPIKEMTDVLSVESK 589
            PE+QIRSA+ALDHLKNYIY+EADKEAHVKEACKGLRNIY+ KVMLVPI+EMTDVLSVESK
Sbjct: 203  PEVQIRSAIALDHLKNYIYIEADKEAHVKEACKGLRNIYAQKVMLVPIREMTDVLSVESK 262

Query: 590  AIDLSRNTWVRLKTGIYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLDGREVVKKK 769
            A+DLSRNTWVR+K G YKGDLAKVVDVDNVRQRVTV+LIPRIDLQALANKL+GREVV KK
Sbjct: 263  AVDLSRNTWVRMKIGTYKGDLAKVVDVDNVRQRVTVQLIPRIDLQALANKLEGREVVTKK 322

Query: 770  VV-PPQRFMNIDEAREMHIRVERRRDPSTGDYFENIGGMMFKDGFLFKTVAMKSISSQNI 946
               PP RFMN++EAREMHIRVERRRDP TGDYFENIGGMMFKDGFL+KTV+MKSIS QNI
Sbjct: 323  AFKPPPRFMNVEEAREMHIRVERRRDPMTGDYFENIGGMMFKDGFLYKTVSMKSISVQNI 382

Query: 947  QPTFDELEKFRKP-EGDDGDMANFSTLFANRKKGHFMKGDAVIIVKGDLKNLMGWVEKVE 1123
            QPTFDELEKFR P E +DGDMA+ STLFANRKKGHFMKGDAVIIVKGDLKNL GWVEKVE
Sbjct: 383  QPTFDELEKFRTPGETEDGDMASLSTLFANRKKGHFMKGDAVIIVKGDLKNLKGWVEKVE 442

Query: 1124 EENVHIRPKMKDLPKTLAVNEKDLCKYFKPGDHVKVVSGSQEGATGMVVKVEGHVLIIVS 1303
            EENVHIRP+MK LPKTLAVNEK+LCKYF+PG+HVKVVSG+QEGATGMVVKVEGHVLII+S
Sbjct: 443  EENVHIRPEMKGLPKTLAVNEKELCKYFEPGNHVKVVSGTQEGATGMVVKVEGHVLIILS 502

Query: 1304 DTTKEDIRVFADHXXXXXXXXXXXXRIGDYELHDLVLLDNGNFGVIIRVESEAFQVLKGV 1483
            DTTKE +RVFAD             RIGDYELHDLVLLDN +FGVIIRVESEAFQVLKGV
Sbjct: 503  DTTKEHLRVFADDVVESSEVTSGVTRIGDYELHDLVLLDNLSFGVIIRVESEAFQVLKGV 562

Query: 1484 PDRPEVALVRLREIKNKVDWKRNAQDRAKNTVSVKDVVKIVEGPCKGKQGPVEHIFKGVL 1663
            PDRPEV LV+LREIK K+D + N QDR KNTVSVKDVV+I++GPCKGKQGPVEHI+KGVL
Sbjct: 563  PDRPEVVLVKLREIKFKIDKRVNVQDRFKNTVSVKDVVRILDGPCKGKQGPVEHIYKGVL 622

Query: 1664 FIVDRHHLEHAGYICAKAQSCIVIGGSRANGNRNGDSL--FPTL--XXXXXXXXXXXXXX 1831
            FI DRHHLEHAG+ICAK+ SC+V+GGSR+N +R+GDS   F  L                
Sbjct: 623  FIYDRHHLEHAGFICAKSHSCVVVGGSRSNADRSGDSFSRFANLRTPPRVPESPRRFPRG 682

Query: 1832 XXXXDFGGRHRGGRGQDPLVGSTIKIRLGPYKGYRGRIVDIKGQLARVELESQMKVITVN 2011
                D GGRHRGGRG D L+GSTIKIR GP+KGYRGR+VD+ GQ  RVELESQMKV+TV+
Sbjct: 683  GRPMDSGGRHRGGRGHDSLIGSTIKIRQGPFKGYRGRVVDVNGQSVRVELESQMKVVTVD 742

Query: 2012 RNLISDNVTVSTPYREAPRYGMGSETPMHPSRTPLHPYMTPMRDPGATPVHDGMRTPMRD 2191
            RN ISDNV V+TPYR+APRYGMGSETPMHPSRTPLHPYMTPMRD GATP+HDGMRTPMRD
Sbjct: 743  RNQISDNVAVATPYRDAPRYGMGSETPMHPSRTPLHPYMTPMRDVGATPIHDGMRTPMRD 802

Query: 2192 RAW---APMSPPRDDWEDGNPGSW-GSSPRYQGNYASQPGTPPSRPYEAPTPGSGWANTP 2359
            RAW   APMSPPRD+WE+GNP SW  +SP+Y      QPG+PPSR YEAPTPGSGWA+TP
Sbjct: 803  RAWNPYAPMSPPRDNWEEGNPDSWVTTSPQY------QPGSPPSRTYEAPTPGSGWASTP 856

Query: 2360 GANYNEAGTPRDXXXXXXXXXXXXXXXTPGGQPMTPSPPSYLPGTPGGQPMTPDSGGLDA 2539
            G NY+EAGTPRD               TPGGQPMTP+  SYLPGTPGGQPMTP + G+D 
Sbjct: 857  GGNYSEAGTPRDSTPAYANVPSPYLPSTPGGQPMTPNSVSYLPGTPGGQPMTPGT-GVDV 915

Query: 2540 MSPTIGGEGYGPCFLPDILVSVRRSGEETVIGVVREVLADGSCKVSVAST--GETITVPQ 2713
            MSP IGGE  GP F+PDILV +RR GEE  +GV+REVL DG+ +V + S+  GE +TV  
Sbjct: 916  MSP-IGGEQEGPWFMPDILVHIRRPGEENTLGVIREVLPDGTYRVGLGSSGGGEIVTVLH 974

Query: 2714 NEMEIVPPRKSDKIKIMSGGQRGATGKLIGIDGTDGIVKLDDTLDVKILDLVILAKLAQ 2890
             E++ V PRKSDKIKIM G  RGATGKLIG+DGTDGIVK+DDTLDVKILD+V+LAKL Q
Sbjct: 975  AEIDAVAPRKSDKIKIMGGAHRGATGKLIGVDGTDGIVKVDDTLDVKILDMVLLAKLVQ 1033


>ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
            gi|223534550|gb|EEF36249.1| suppressor of ty, putative
            [Ricinus communis]
          Length = 1045

 Score = 1377 bits (3563), Expect = 0.0
 Identities = 696/961 (72%), Positives = 787/961 (81%), Gaps = 14/961 (1%)
 Frame = +2

Query: 50   FIDDEAIVXXXXXXXXXXXXXXXFIV-NGAELXXXXXXXXXXXXXXXXXXXXQEDMEALE 226
            F D EA V               FIV NGA+L                    QEDMEALE
Sbjct: 90   FFDLEAEVDSDEEEEEDDDAEDDFIVDNGADLPDEDDGRRVHRRPLLPREDDQEDMEALE 149

Query: 227  RRIQERYARTDHGDFDEETTDVEQQALLPSVKDPKLWMVKCAIGHEREAAICLMQKSIDR 406
            RRIQ RYAR+ H ++DEETT+VEQQALLPSV+DPKLWMVKCAIG ERE A+CLMQK ID+
Sbjct: 150  RRIQARYARSSHTEYDEETTEVEQQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDK 209

Query: 407  GPELQIRSAVALDHLKNYIYVEADKEAHVKEACKGLRNIYSAKVMLVPIKEMTDVLSVES 586
            G ELQIRSA+ALDHLKNYIY+EADKEAHV+EACKGLRNIY+ K+MLVPIKEMTDVLSVES
Sbjct: 210  GSELQIRSAIALDHLKNYIYIEADKEAHVREACKGLRNIYAQKIMLVPIKEMTDVLSVES 269

Query: 587  KAIDLSRNTWVRLKTGIYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLDGREVVKK 766
            KAIDLSR+TWVR+K G YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL+GREV KK
Sbjct: 270  KAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKK 329

Query: 767  KV-VPPQRFMNIDEAREMHIRVERRRDPSTGDYFENIGGMMFKDGFLFKTVAMKSISSQN 943
            K  VPP RFMN+DEARE+HIRVERRRDP +GDYFENIGGM+FKDGFL+KTV+MKSIS QN
Sbjct: 330  KAFVPPPRFMNVDEARELHIRVERRRDPMSGDYFENIGGMLFKDGFLYKTVSMKSISVQN 389

Query: 944  IQPTFDELEKFRKPEGDDGDMANFSTLFANRKKGHFMKGDAVIIVKGDLKNLMGWVEKVE 1123
            I+PTFDELEKFRKP  +DGD+   STLFANRKKGHF+KGDAVIIVKGDLKNL GWVEKV+
Sbjct: 390  IKPTFDELEKFRKPGENDGDIVGLSTLFANRKKGHFVKGDAVIIVKGDLKNLKGWVEKVD 449

Query: 1124 EENVHIRPKMKDLPKTLAVNEKDLCKYFKPGDHVKVVSGSQEGATGMVVKVEGHVLIIVS 1303
            EENVHI+P+MKDLP+T+AVNEK+LCKYF+PG+HVKVVSG+QEGATGMVVKVE HVLII+S
Sbjct: 450  EENVHIKPEMKDLPRTIAVNEKELCKYFEPGNHVKVVSGTQEGATGMVVKVEQHVLIILS 509

Query: 1304 DTTKEDIRVFADHXXXXXXXXXXXXRIGDYELHDLVLLDNGNFGVIIRVESEAFQVLKGV 1483
            DTTKE IRVFAD             +IGDYELHDLVLLDN +FGVIIRVESEAFQVLKGV
Sbjct: 510  DTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGV 569

Query: 1484 PDRPEVALVRLREIKNKVDWKRNAQDRAKNTVSVKDVVKIVEGPCKGKQGPVEHIFKGVL 1663
            P+RPEVALVRLREIK K++ K N QDR KNT++VKDVV+I++GPCKGKQGPVEHI+KGVL
Sbjct: 570  PERPEVALVRLREIKCKIEKKFNVQDRYKNTIAVKDVVRIIDGPCKGKQGPVEHIYKGVL 629

Query: 1664 FIVDRHHLEHAGYICAKAQSCIVIGGSRANGNRNGDSL--FPTLXXXXXXXXXXXXXXXX 1837
            FI DRHHLEHAG+ICAK+ SCIV+GG+RANG+RNGDS   F +                 
Sbjct: 630  FIYDRHHLEHAGFICAKSHSCIVVGGTRANGDRNGDSYSRFSSFKTPPRVPQSPRRFPRG 689

Query: 1838 XXDF--GGRHRGGR-GQDPLVGSTIKIRLGPYKGYRGRIVDIKGQLARVELESQMKVI-- 2002
               F  GGR+RGGR G D LVG+T+KIRLGP+KGYRGR+V+IKG   RVELESQMKVI  
Sbjct: 690  GPPFESGGRNRGGRGGHDALVGTTVKIRLGPFKGYRGRVVEIKGPSVRVELESQMKVILG 749

Query: 2003 TVNRNLISDNVTVSTPYREAPRYGMGSETPMHPSRTPLHPYMTPMRDPGATPVHDGMRTP 2182
              +RN ISDNV +STP+R++ RYGMGSETPMHPSRTPLHPYMTPMRD GATP+HDGMRTP
Sbjct: 750  KFDRNNISDNVVISTPHRDSSRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTP 809

Query: 2183 MRDRAW---APMSPPRDDWEDGNPGSWGSSPRYQGNYASQPGTPPSRPYEAPTPGSGWAN 2353
            MRDRAW   APMSPPRD+WEDGNP SWG+SP Y      QPG+PPSR YEAPTPGSGWAN
Sbjct: 810  MRDRAWNPYAPMSPPRDNWEDGNPASWGTSPHY------QPGSPPSRAYEAPTPGSGWAN 863

Query: 2354 TPGANYNEAGTPRDXXXXXXXXXXXXXXXTPGGQPMTPSPPSYLPGTPGGQPMTPDSGGL 2533
            TPG +Y++AGTPRD               TPGGQPMTPS  +YLPGTPGGQPMTP +GGL
Sbjct: 864  TPGGSYSDAGTPRDSSSAYANAPSPYLPSTPGGQPMTPSSAAYLPGTPGGQPMTPGTGGL 923

Query: 2534 DAMSPTIGGEGYGPCFLPDILVSVRRSGEETVIGVVREVLADGSCKVSVAS--TGETITV 2707
            D MSP IGG+  GP ++PDILV+VR++ +++ IGV+R+VLADGSC+V + +   GETIT 
Sbjct: 924  DVMSPVIGGDNEGPWYMPDILVNVRKAADDSAIGVIRDVLADGSCRVVLGANGNGETITA 983

Query: 2708 PQNEMEIVPPRKSDKIKIMSGGQRGATGKLIGIDGTDGIVKLDDTLDVKILDLVILAKLA 2887
              NE+EIV PRKSDKIKIM G  RGATGKLIG+DGTDGIVK+DDTLDVKILD+VILAKLA
Sbjct: 984  LPNEIEIVVPRKSDKIKIMGGAHRGATGKLIGVDGTDGIVKVDDTLDVKILDMVILAKLA 1043

Query: 2888 Q 2890
            Q
Sbjct: 1044 Q 1044


>ref|XP_004148818.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like [Cucumis sativus]
          Length = 1044

 Score = 1376 bits (3561), Expect = 0.0
 Identities = 681/912 (74%), Positives = 775/912 (84%), Gaps = 16/912 (1%)
 Frame = +2

Query: 203  QEDMEALERRIQERYARTDHGDFDEETTDVEQQALLPSVKDPKLWMVKCAIGHEREAAIC 382
            QED+EALERRIQ RYAR++H ++DEETT+VEQQALLPSV+DPKLWMVKCAIG EREAA+C
Sbjct: 138  QEDVEALERRIQARYARSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGREREAAVC 197

Query: 383  LMQKSIDRGPELQIRSAVALDHLKNYIYVEADKEAHVKEACKGLRNIYSAKVMLVPIKEM 562
            LMQK IDRGPE+QIRSAVALDHLKN+IY+EADKEAHV+EACKGLRNIY+ K+ LVPIKEM
Sbjct: 198  LMQKCIDRGPEMQIRSAVALDHLKNFIYIEADKEAHVREACKGLRNIYAQKITLVPIKEM 257

Query: 563  TDVLSVESKAIDLSRNTWVRLKTGIYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 742
            TDVLSVESKAIDLSR+TWVR+K G YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL
Sbjct: 258  TDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 317

Query: 743  DGREVVKKKV-VPPQRFMNIDEAREMHIRVERRRDPSTGDYFENIGGMMFKDGFLFKTVA 919
            +GREV KKK  VPP RFMNIDEARE+HIRVERRRDP TG+YFENIGGM FKDGFL+KTV+
Sbjct: 318  EGREVAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVS 377

Query: 920  MKSISSQNIQPTFDELEKFRKP-EGDDGDMANFSTLFANRKKGHFMKGDAVIIVKGDLKN 1096
            MKSIS+QNI+PTFDELEKFRKP E  DGD+A+ STLFANRKKGHFMKGDAVI+VKGDLKN
Sbjct: 378  MKSISAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKN 437

Query: 1097 LMGWVEKVEEENVHIRPKMKDLPKTLAVNEKDLCKYFKPGDHVKVVSGSQEGATGMVVKV 1276
            L GWVEKVEEENVHIRP+MK LPKTLAVNE++LCKYF+PG+HVKVVSG+QEGATGMVVKV
Sbjct: 438  LKGWVEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVSGTQEGATGMVVKV 497

Query: 1277 EGHVLIIVSDTTKEDIRVFADHXXXXXXXXXXXXRIGDYELHDLVLLDNGNFGVIIRVES 1456
            + HVLII+SDTTKE IRVFAD             RIGDYELHDLVLLDN +FGVIIRVE+
Sbjct: 498  DQHVLIILSDTTKEHIRVFADDVVESSEVTTGVTRIGDYELHDLVLLDNMSFGVIIRVET 557

Query: 1457 EAFQVLKGVPDRPEVALVRLREIKNKVDWKRNAQDRAKNTVSVKDVVKIVEGPCKGKQGP 1636
            EAFQVLKG PDRPEV +V+LREIK+K+D K + QDR  NT+S KDVV+I+EGPCKGKQGP
Sbjct: 558  EAFQVLKGTPDRPEVDIVKLREIKSKIDKKISVQDRFNNTISSKDVVRILEGPCKGKQGP 617

Query: 1637 VEHIFKGVLFIVDRHHLEHAGYICAKAQSCIVIGGSRANGNRNGDSLFP----TLXXXXX 1804
            VEHI++G+LFI DRHHLEHAG+ICAK+QSC+V+GGSR NGNRNG+S              
Sbjct: 618  VEHIYRGILFIYDRHHLEHAGFICAKSQSCVVVGGSRTNGNRNGNSYSRFAGIATPPRFP 677

Query: 1805 XXXXXXXXXXXXXDFGGRHRGGRG-QDPLVGSTIKIRLGPYKGYRGRIVDIKGQLARVEL 1981
                         D GGRHRGGRG  D LVGST+K+R GPYKGYRGR+V+IKGQL RVEL
Sbjct: 678  QSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVEL 737

Query: 1982 ESQMKVIT----VNRNLISDNVTVSTPYREAPRYGMGSETPMHPSRTPLHPYMTPMRDPG 2149
            ESQMKV+T    ++RN ISDNV +STP+R+A RYGMGSETPMHPSRTPLHPYMTPMRD G
Sbjct: 738  ESQMKVVTGMFKIDRNFISDNVAISTPHRDASRYGMGSETPMHPSRTPLHPYMTPMRDIG 797

Query: 2150 ATPVHDGMRTPMRDRAW---APMSPPRDDWEDGNPGSWGSSPRYQGNYASQPGTPPSRPY 2320
             TP+HDGMRTPMRDRAW   APMSP RD+WE+GNP +WG+SP+Y      QPG+PPSR Y
Sbjct: 798  TTPIHDGMRTPMRDRAWNPYAPMSPSRDNWEEGNPATWGASPQY------QPGSPPSRTY 851

Query: 2321 EAPTPGSGWANTPGANYNEAGTPRDXXXXXXXXXXXXXXXTPGGQPMTPSPPSYLPGTPG 2500
            EAPTPGSGWANTPG +Y++AGTPRD               TPGGQPMTP+  SYLPGTPG
Sbjct: 852  EAPTPGSGWANTPGGSYSDAGTPRDSGSAYANAPSPYLPSTPGGQPMTPNSASYLPGTPG 911

Query: 2501 GQPMTPDSGGLDAMSPTIGGEGYGPCFLPDILVSVRRSGEETVIGVVREVLADGSCKVSV 2680
            GQPMTP +GGLD MSP IGG+  GP ++PDILV+ RRSG++ ++GV+REVL DGSC++ +
Sbjct: 912  GQPMTPGTGGLDMMSPVIGGDTEGPWYMPDILVNYRRSGDDPIMGVIREVLPDGSCRIGL 971

Query: 2681 AST--GETITVPQNEMEIVPPRKSDKIKIMSGGQRGATGKLIGIDGTDGIVKLDDTLDVK 2854
             S+  GET+T P +E+E++ PRKSDKIKIM G  RGATGKLIG+DGTDGIVK+DDTLDVK
Sbjct: 972  GSSGNGETVTAPSSEVEVIVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLDVK 1031

Query: 2855 ILDLVILAKLAQ 2890
            ILDLVILAKLAQ
Sbjct: 1032 ILDLVILAKLAQ 1043


>ref|XP_003634397.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like isoform 2 [Vitis vinifera]
          Length = 1044

 Score = 1368 bits (3540), Expect = 0.0
 Identities = 699/969 (72%), Positives = 781/969 (80%), Gaps = 22/969 (2%)
 Frame = +2

Query: 50   FIDDEAIVXXXXXXXXXXXXXXXFIVNGAELXXXXXXXXXXXXXXXXXXXXQEDMEALER 229
            F+D EA V                +  GAEL                    QED EALER
Sbjct: 83   FLDLEAAVDSDEEEEEEDGEDDFIVDAGAELPDEDDGQRMRRRPLLPQEDEQEDFEALER 142

Query: 230  RIQERYARTDHGDFDEETTDVEQQALLPSVKDPKLWMVKCAIGHEREAAICLMQKSIDRG 409
            +IQERY ++ H ++DEETT+VEQQALLPSV+DPKLWMVKCAIGHEREAA+CLMQKSID+G
Sbjct: 143  KIQERYGKSSHAEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKSIDKG 202

Query: 410  PELQIRSAVALDHLKNYIYVEADKEAHVKEACKGLRNIYSAKVMLVPIKEMTDVLSVESK 589
            PE+QIRSA+ALDHLKNYIY+EADKEAHVKEACKGLRNIY+ KVMLVPI+EMTDVLSVESK
Sbjct: 203  PEVQIRSAIALDHLKNYIYIEADKEAHVKEACKGLRNIYAQKVMLVPIREMTDVLSVESK 262

Query: 590  AIDLSRNTWVRLKTGIYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLDGREVVKKK 769
            A+DLSRNTWVR+K G YKGDLAKVVDVDNVRQRVTV+LIPRIDLQALANKL+GREVV KK
Sbjct: 263  AVDLSRNTWVRMKIGTYKGDLAKVVDVDNVRQRVTVQLIPRIDLQALANKLEGREVVTKK 322

Query: 770  VV-PPQRFMNIDEAREMHIRVERRRDPSTGDYFENIGGMMFKDGFLFKTVAMKSISSQNI 946
               PP RFMN++EAREMHIRVERRRDP TGDYFENIGGMMFKDGFL+KTV+MKSIS QNI
Sbjct: 323  AFKPPPRFMNVEEAREMHIRVERRRDPMTGDYFENIGGMMFKDGFLYKTVSMKSISVQNI 382

Query: 947  QPTFDELEKFRKP-EGDDGDMANFSTLFANRKKGHFMKGDAVIIVKGDLKNLMGWVEKVE 1123
            QPTFDELEKFR P E +DGDMA+ STLFANRKKGHFMKGDAVIIVKGDLKNL GWVEKVE
Sbjct: 383  QPTFDELEKFRTPGETEDGDMASLSTLFANRKKGHFMKGDAVIIVKGDLKNLKGWVEKVE 442

Query: 1124 EENVHIRPKMKDLPKTLAVNEKDLCKYFKPGDHVKVVSGSQEGATGMVVKVEGHVLIIVS 1303
            EENVHIRP+MK LPKTLAVNEK+LCKYF+PG+HVKVVSG+QEGATGMVVKVEGHVLII+S
Sbjct: 443  EENVHIRPEMKGLPKTLAVNEKELCKYFEPGNHVKVVSGTQEGATGMVVKVEGHVLIILS 502

Query: 1304 DTTKEDIRVFADHXXXXXXXXXXXXRIGDYELHDLVLLDNGNFGVIIRVESEAFQVLKGV 1483
            DTTKE +RVFAD             RIGDYELHDLVLLDN +FGVIIRVESEAFQVLKGV
Sbjct: 503  DTTKEHLRVFADDVVESSEVTSGVTRIGDYELHDLVLLDNLSFGVIIRVESEAFQVLKGV 562

Query: 1484 PDRPEVALVRLREIKNKVDWKRNAQDRAKNTVSVKDVVKIVEGPCKGKQGPVEHIFKGVL 1663
            PDRPEV LV+LREIK K+D + N QDR KNTVSVKDVV+I++GPCKGKQGPVEHI+KGVL
Sbjct: 563  PDRPEVVLVKLREIKFKIDKRVNVQDRFKNTVSVKDVVRILDGPCKGKQGPVEHIYKGVL 622

Query: 1664 FIVDRHHLEHAGYICAKAQSCIVIGGSRANGNRNGDSL--FPTL--XXXXXXXXXXXXXX 1831
            FI DRHHLEHAG+ICAK+ SC+V+GGSR+N +R+GDS   F  L                
Sbjct: 623  FIYDRHHLEHAGFICAKSHSCVVVGGSRSNADRSGDSFSRFANLRTPPRVPESPRRFPRG 682

Query: 1832 XXXXDFGGRHRGGRGQDPLVGSTIKIRLGPYKGYRGRIVDIKGQLARVELESQMKVIT-- 2005
                D GGRHRGGRG D L+GSTIKIR GP+KGYRGR+VD+ GQ  RVELESQMKV+T  
Sbjct: 683  GRPMDSGGRHRGGRGHDSLIGSTIKIRQGPFKGYRGRVVDVNGQSVRVELESQMKVVTGK 742

Query: 2006 --------VNRNLISDNVTVSTPYREAPRYGMGSETPMHPSRTPLHPYMTPMRDPGATPV 2161
                     +RN ISDNV V+TPYR+APRYGMGSETPMHPSRTPLHPYMTPMRD GATP+
Sbjct: 743  SYLVLKNLFDRNQISDNVAVATPYRDAPRYGMGSETPMHPSRTPLHPYMTPMRDVGATPI 802

Query: 2162 HDGMRTPMRDRAW---APMSPPRDDWEDGNPGSW-GSSPRYQGNYASQPGTPPSRPYEAP 2329
            HDGMRTPMRDRAW   APMSPPRD+WE+GNP SW  +SP+Y      QPG+PPSR YEAP
Sbjct: 803  HDGMRTPMRDRAWNPYAPMSPPRDNWEEGNPDSWVTTSPQY------QPGSPPSRTYEAP 856

Query: 2330 TPGSGWANTPGANYNEAGTPRDXXXXXXXXXXXXXXXTPGGQPMTPSPPSYLPGTPGGQP 2509
            TPGSGWA+TPG NY+EAGTPRD               TPGGQPMTP+  SYLPGTPGGQP
Sbjct: 857  TPGSGWASTPGGNYSEAGTPRDSTPAYANVPSPYLPSTPGGQPMTPNSVSYLPGTPGGQP 916

Query: 2510 MTPDSGGLDAMSPTIGGEGYGPCFLPDILVSVRRSGEETVIGVVREVLADGSCKVSVAST 2689
            MTP + G+D MSP IGGE  GP F+PDILV +RR GEE  +GV+REVL DG+ +V + S+
Sbjct: 917  MTPGT-GVDVMSP-IGGEQEGPWFMPDILVHIRRPGEENTLGVIREVLPDGTYRVGLGSS 974

Query: 2690 --GETITVPQNEMEIVPPRKSDKIKIMSGGQRGATGKLIGIDGTDGIVKLDDTLDVKILD 2863
              GE +TV   E++ V PRKSDKIKIM G  RGATGKLIG+DGTDGIVK+DDTLDVKILD
Sbjct: 975  GGGEIVTVLHAEIDAVAPRKSDKIKIMGGAHRGATGKLIGVDGTDGIVKVDDTLDVKILD 1034

Query: 2864 LVILAKLAQ 2890
            +V+LAKL Q
Sbjct: 1035 MVLLAKLVQ 1043


>ref|XP_003526672.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like [Glycine max]
          Length = 1039

 Score = 1336 bits (3458), Expect = 0.0
 Identities = 682/959 (71%), Positives = 773/959 (80%), Gaps = 11/959 (1%)
 Frame = +2

Query: 47   NFIDDEAIVXXXXXXXXXXXXXXXFIVNGAELXXXXXXXXXXXXXXXXXXXXQ-EDMEAL 223
            NF D+EA+V                +  GA+L                      ED+EA+
Sbjct: 91   NFFDEEAVVDSDEEEEEEEGEDDFIVEGGADLPEEDDGRKMRSSRMLPHHQEDHEDLEAM 150

Query: 224  ERRIQERYARTDHGDFDEETTDVEQQALLPSVKDPKLWMVKCAIGHEREAAICLMQKSID 403
             R IQERY R    D+DEETTDVEQQALLPSV+DPKLWMVKCAIG ERE A+CLMQK ID
Sbjct: 151  ARSIQERYGRR-LTDYDEETTDVEQQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYID 209

Query: 404  RGPELQIRSAVALDHLKNYIYVEADKEAHVKEACKGLRNIYSAKVMLVPIKEMTDVLSVE 583
            +G ELQIRSA+ALDHLKNYIYVEADKEAHV+EACKGLRNI+  K+ LVPI+EMTDVLSVE
Sbjct: 210  KGSELQIRSAIALDHLKNYIYVEADKEAHVREACKGLRNIFGQKITLVPIREMTDVLSVE 269

Query: 584  SKAIDLSRNTWVRLKTGIYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLDGREVVK 763
            SKAIDL+R+TWVR+K G YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL+GREVVK
Sbjct: 270  SKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVVK 329

Query: 764  KKV-VPPQRFMNIDEAREMHIRVERRRDPSTGDYFENIGGMMFKDGFLFKTVAMKSISSQ 940
            KK  VPP RFMN+DEARE+HIRVE RRD + G+ F+ IGGMMFKDGFL+KTV++KSIS+Q
Sbjct: 330  KKAFVPPPRFMNVDEARELHIRVEHRRD-AYGERFDAIGGMMFKDGFLYKTVSIKSISAQ 388

Query: 941  NIQPTFDELEKFRKP-EGDDGDMANFSTLFANRKKGHFMKGDAVIIVKGDLKNLMGWVEK 1117
            NI+PTFDELEKFRKP E  DGD+A+ STLFANRKKGHFMKGDAVI++KGDLKNL G VEK
Sbjct: 389  NIKPTFDELEKFRKPGESGDGDVASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGKVEK 448

Query: 1118 VEEENVHIRPKMKDLPKTLAVNEKDLCKYFKPGDHVKVVSGSQEGATGMVVKVEGHVLII 1297
            V+E+NVHIRP+M+DLPKT+AVNEK+LCKYF+PG+HVKVVSG+QEGATGMVVKVE HVLI+
Sbjct: 449  VDEDNVHIRPEMEDLPKTIAVNEKELCKYFEPGNHVKVVSGAQEGATGMVVKVEQHVLIL 508

Query: 1298 VSDTTKEDIRVFADHXXXXXXXXXXXXRIGDYELHDLVLLDNGNFGVIIRVESEAFQVLK 1477
            +SDTTKE IRVFAD             RIGDYEL DLVLLDN +FGVIIRVESEAFQVLK
Sbjct: 509  ISDTTKEHIRVFADDVVESSEVTTGVTRIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK 568

Query: 1478 GVPDRPEVALVRLREIKNKVDWKRNAQDRAKNTVSVKDVVKIVEGPCKGKQGPVEHIFKG 1657
            G+PDRPEV L++LREIK K+D K + QDR KNTVS KDVV+IV+GPCKGKQGPVEHI++G
Sbjct: 569  GIPDRPEVVLIKLREIKCKIDKKISVQDRFKNTVSSKDVVRIVDGPCKGKQGPVEHIYRG 628

Query: 1658 VLFIVDRHHLEHAGYICAKAQSCIVIGGSRANGNRNGD--SLFPTL-XXXXXXXXXXXXX 1828
            +LFI DRHHLEHAG+ICAKAQSC+V+GGSR++G RNGD  S F +L              
Sbjct: 629  ILFIFDRHHLEHAGFICAKAQSCVVVGGSRSSGERNGDAYSRFASLRSPSRIPPSPRRFS 688

Query: 1829 XXXXXDFGGRHRGGRGQDPLVGSTIKIRLGPYKGYRGRIVDIKGQLARVELESQMKVITV 2008
                 D GGRHRGGRG D L G+T+K+R GPYKGYRGR++D+KG   RVELESQMKV+TV
Sbjct: 689  RGGPMDSGGRHRGGRGHDSLAGTTVKVRQGPYKGYRGRVIDVKGTTVRVELESQMKVVTV 748

Query: 2009 NRNLISDNVTVSTPYREAPRYGMGSETPMHPSRTPLHPYMTPMRDPGATPVHDGMRTPMR 2188
            +RN ISDNV V TPYR+  RYGMGSETPMHPSRTPLHPYMTPMRDPGATP+HDGMRTPM 
Sbjct: 749  DRNHISDNVAV-TPYRDTSRYGMGSETPMHPSRTPLHPYMTPMRDPGATPIHDGMRTPMH 807

Query: 2189 DRAW---APMSPPRDDWEDGNPGSWGSSPRYQGNYASQPGTPPSRPYEAPTPGSGWANTP 2359
             RAW    PMSPPRD+WEDGNPGSWG+SP+Y      QPG+PPSRPYEAPTPG+GWA+TP
Sbjct: 808  SRAWNPYTPMSPPRDNWEDGNPGSWGASPQY------QPGSPPSRPYEAPTPGAGWASTP 861

Query: 2360 GANYNEAGTPRDXXXXXXXXXXXXXXXTPGGQPMTPSPPSYLPGTPGGQPMTPDSGGLDA 2539
            G NY+EAGTPRD               TPGGQPMTPS  SYLPGTPGGQPMTP +GG+D 
Sbjct: 862  GGNYSEAGTPRD-SSAYANAPSPYLPSTPGGQPMTPSSASYLPGTPGGQPMTPGTGGMDM 920

Query: 2540 MSPTIGGEGYGPCFLPDILVSVRRSGEETVIGVVREVLADGSCKVSVAST--GETITVPQ 2713
            MSP +GGE  GP F+PDILV+V R+GEE+ IGV+RE L DGS +V + S+  GETIT   
Sbjct: 921  MSPVLGGENEGPWFIPDILVNVHRAGEES-IGVIREALPDGSYRVGLGSSGNGETITALP 979

Query: 2714 NEMEIVPPRKSDKIKIMSGGQRGATGKLIGIDGTDGIVKLDDTLDVKILDLVILAKLAQ 2890
            NEME V PRKSDKIKIM G  RGATGKLIG+DGTDGIVK+DDTLDVKILDLVILAKLAQ
Sbjct: 980  NEMEAVVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLDVKILDLVILAKLAQ 1038


Top