BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002391
         (1836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279648.2| PREDICTED: protein FAF-like, chloroplastic [...   163   1e-37
emb|CAN72229.1| hypothetical protein VITISV_024734 [Vitis vinifera]   163   1e-37
ref|XP_002299770.1| predicted protein [Populus trichocarpa] gi|2...   161   5e-37
ref|XP_002513735.1| conserved hypothetical protein [Ricinus comm...   159   3e-36
ref|NP_680195.2| uncharacterized protein [Arabidopsis thaliana] ...   152   2e-34

>ref|XP_002279648.2| PREDICTED: protein FAF-like, chloroplastic [Vitis vinifera]
          Length = 466

 Score =  163 bits (413), Expect = 1e-37
 Identities = 87/158 (55%), Positives = 110/158 (69%), Gaps = 4/158 (2%)
 Frame = +3

Query: 1188 KLPTGVISVHRSALMANKQLAGLTNRDPTWSPKLEMNIGTEETPFAQSLPPPPLVSRL-- 1361
            KLP+G+I+VHRSALM  K+L GL NR+PTW PKL      EE   A  LPPPP V+R+  
Sbjct: 318  KLPSGMINVHRSALMM-KKLMGLVNRNPTWPPKLNKAANLEE---ATPLPPPPRVARIIT 373

Query: 1362 TP--SSAASSFNTYDYCWRTKAVAPPTAVCTPHPLTQQLPPINKHNKFIVHKNINPQANQ 1535
            TP  ++AASSFN YDYCWR+K   PPT     +P    +P  N  +KF + K+   Q  Q
Sbjct: 374  TPPAATAASSFNAYDYCWRSK---PPTGTAILNP--PSIPLKNNSDKFFLSKSSKAQEQQ 428

Query: 1536 ELVLMRGNNADYLVPSVKGCKEPRRSLIMWEPYCIATS 1649
            +L+L+RGN A+Y VP ++GCKEPRRSL++WEPYCIATS
Sbjct: 429  QLILLRGNKAEYSVPLLRGCKEPRRSLVIWEPYCIATS 466



 Score =  145 bits (367), Expect = 3e-32
 Identities = 109/274 (39%), Positives = 153/274 (55%), Gaps = 35/274 (12%)
 Frame = +3

Query: 216 KMSTAVNMNVSNEL---QGIGSILGSSKYERSK--TMRRTLSADMSSKKWLVQNGFSPLK 380
           ++S+++ M+   +L   QGI SILGS   ER+K  ++RRTLS DMSS+KWL Q+GFS ++
Sbjct: 10  RLSSSLKMDEEAKLIEKQGIVSILGSD-CERTKAASLRRTLSWDMSSRKWLAQHGFSHMR 68

Query: 381 RIASSEEFQV-------SSDGDSPIWNSKKEKEPPGQSDIWNSIVSQ-------KSSPLA 518
           +IASS++F V       SS+G+   +   KE E PG    W+SI++Q       KS  L 
Sbjct: 69  KIASSQQFIVSAADSSSSSEGEDE-YEEGKEVERPGGFQTWSSILTQKGGEESGKSGTLP 127

Query: 519 TPYVHPLAKR-ARSLSKRSLEICTESLGSETGSDGF---------XXXXXXXXXXXXXXX 668
            PYVHPL KR + SLS++SL++CTESLGSETGS+GF                        
Sbjct: 128 LPYVHPLVKRSSSSLSEKSLQVCTESLGSETGSEGFSSSANTQEDKQDQQQQNQHQQKQQ 187

Query: 669 XXXXXXXXXAVVKQEMGGVMKYSS-HAVKKXXXXXXXXXXXXXCQS-----GIHMRSHRK 830
                    ++ KQE+  V +  + ++V+K               S      +   +HR+
Sbjct: 188 QQQYEKESSSLGKQELTVVERPDNYYSVRKRLQPPSSFPPPLPSLSPTQGPNVRFHTHRQ 247

Query: 831 DGRLVLEAVPTPAPSQSYFQAQREGGRLLLTFVN 932
           +GRLVLEAV    P+Q+ FQAQR GGRL+LTF N
Sbjct: 248 NGRLVLEAV--SVPTQNCFQAQRHGGRLVLTFAN 279


>emb|CAN72229.1| hypothetical protein VITISV_024734 [Vitis vinifera]
          Length = 500

 Score =  163 bits (413), Expect = 1e-37
 Identities = 87/158 (55%), Positives = 110/158 (69%), Gaps = 4/158 (2%)
 Frame = +3

Query: 1188 KLPTGVISVHRSALMANKQLAGLTNRDPTWSPKLEMNIGTEETPFAQSLPPPPLVSRL-- 1361
            KLP+G+I+VHRSALM  K+L GL NR+PTW PKL      EE   A  LPPPP V+R+  
Sbjct: 352  KLPSGMINVHRSALMM-KKLMGLVNRNPTWPPKLNKAANLEE---ATPLPPPPRVARIIT 407

Query: 1362 TP--SSAASSFNTYDYCWRTKAVAPPTAVCTPHPLTQQLPPINKHNKFIVHKNINPQANQ 1535
            TP  ++AASSFN YDYCWR+K   PPT     +P    +P  N  +KF + K+   Q  Q
Sbjct: 408  TPPAATAASSFNAYDYCWRSK---PPTGTAILNP--PSIPLKNNSDKFFLSKSSKAQEQQ 462

Query: 1536 ELVLMRGNNADYLVPSVKGCKEPRRSLIMWEPYCIATS 1649
            +L+L+RGN A+Y VP ++GCKEPRRSL++WEPYCIATS
Sbjct: 463  QLILLRGNKAEYSVPLLRGCKEPRRSLVIWEPYCIATS 500



 Score =  141 bits (355), Expect = 7e-31
 Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 35/274 (12%)
 Frame = +3

Query: 216 KMSTAVNMNVSNEL---QGIGSILGSSKYERSK--TMRRTLSADMSSKKWLVQNGFSPLK 380
           ++S+++ M+   +L   QGI SILGS   ER+K  ++RRTLS DMSS+K L Q+GFS ++
Sbjct: 10  RLSSSLKMDEEAKLIEKQGIVSILGSD-CERTKAASLRRTLSWDMSSRKXLAQHGFSHMR 68

Query: 381 RIASSEEFQV-------SSDGDSPIWNSKKEKEPPGQSDIWNSIVSQ-------KSSPLA 518
           +IASS++F V       SS+G+   +   KE E PG    W+SI++Q       KS  L 
Sbjct: 69  KIASSQQFIVSAADSSSSSEGEDE-YEEGKEVERPGGFQTWSSILTQKGGEESGKSGTLP 127

Query: 519 TPYVHPLAKR-ARSLSKRSLEICTESLGSETGSDGF---------XXXXXXXXXXXXXXX 668
            PYVHPL KR + SLS++SL++CTESLGSETGS+GF                        
Sbjct: 128 LPYVHPLVKRSSSSLSEKSLQVCTESLGSETGSEGFSSSANTQEDKQDQQQQNQHQQKQQ 187

Query: 669 XXXXXXXXXAVVKQEMGGVMKYSS-HAVKKXXXXXXXXXXXXXCQS-----GIHMRSHRK 830
                    ++ KQE+  V +  + ++V+K               S      +   +HR+
Sbjct: 188 QQQYEKESSSLGKQELTVVERPDNYYSVRKRLQPPSSFPPPLPSLSPTQGPNVRFHTHRQ 247

Query: 831 DGRLVLEAVPTPAPSQSYFQAQREGGRLLLTFVN 932
           +GRLVLEAV    P+Q+ FQAQR GGRL+LTF N
Sbjct: 248 NGRLVLEAV--SVPTQNCFQAQRHGGRLVLTFAN 279


>ref|XP_002299770.1| predicted protein [Populus trichocarpa] gi|222847028|gb|EEE84575.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  161 bits (408), Expect = 5e-37
 Identities = 116/247 (46%), Positives = 139/247 (56%), Gaps = 22/247 (8%)
 Frame = +3

Query: 258 QGIGSILGSSKYERSKT----MRRTLSADMSSKKWLVQNGFSPLKRIASSEEFQ--VSSD 419
           QGI SILGS   ER+K+    +RRTLSADMSSKKW  Q+GF PLK+IASS+ F     + 
Sbjct: 26  QGIVSILGSD-VERTKSAAASLRRTLSADMSSKKWQAQHGFYPLKKIASSDHFPAWTEAQ 84

Query: 420 GDSPIWNS------KKEKEPPGQSDIWNSIVSQKS---SPLATPYVHPLAKR-ARSLSKR 569
           G   IW+S      KKE E PGQ D+W+SI+SQK+   S    PYVHPL KR A SLSK+
Sbjct: 85  GQFDIWSSIQEDKNKKEVEKPGQFDVWSSILSQKTKEDSKNVQPYVHPLVKRSASSLSKK 144

Query: 570 SLEICTESLGSETGSDGFXXXXXXXXXXXXXXXXXXXXXXXXAV-VKQEMGGVMKY---S 737
           SLEICTESLGSETGSDGF                         +    E   V KY   +
Sbjct: 145 SLEICTESLGSETGSDGFSSYPPSETGDAEEDKEEEQRQERVTLKFDTEDLRVAKYNLAA 204

Query: 738 SHAVKKXXXXXXXXXXXXXCQSG--IHMRSHRKDGRLVLEAVPTPAPSQSYFQAQREGGR 911
           ++  K               + G  + M+S R +GRLVLEAV    PSQ  F AQR+ GR
Sbjct: 205 ANCKKSQPRSFPPPIPSLSSRDGASVLMKSRRDNGRLVLEAV--SVPSQKNFHAQRQDGR 262

Query: 912 LLLTFVN 932
           L+LTF N
Sbjct: 263 LVLTFAN 269



 Score =  117 bits (292), Expect = 1e-23
 Identities = 73/172 (42%), Positives = 91/172 (52%), Gaps = 17/172 (9%)
 Frame = +3

Query: 1185 NKLPTGVISVHRSALMANKQLAGLTNRDPTWSPKLE--MNIGTEE--TPFAQSLPPPPLV 1352
            +K  +GVISVHR ALM NK L    NR+PTW  K       G  E  T   QSLPP P V
Sbjct: 329  DKEASGVISVHRLALMMNKSLV-FANRNPTWPNKFNDISKFGEVEPITSLTQSLPPRPPV 387

Query: 1353 SRLTPS-------------SAASSFNTYDYCWRTKAVAPPTAVCTPHPLTQQLPPINKHN 1493
            +R+ PS              AA+SFN  +Y W+ K++   T                  +
Sbjct: 388  ARMIPSPPAATMATTEVTAKAAASFNACEYFWKPKSMTTTTT-----------------S 430

Query: 1494 KFIVHKNINPQANQELVLMRGNNADYLVPSVKGCKEPRRSLIMWEPYCIATS 1649
            KF+      P   QELV++RGN  DYLVP +K CKEPR+SL+ WEP+CIATS
Sbjct: 431  KFV------PNEQQELVVLRGNKGDYLVPLLKSCKEPRKSLLFWEPHCIATS 476


>ref|XP_002513735.1| conserved hypothetical protein [Ricinus communis]
           gi|223547186|gb|EEF48682.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 542

 Score =  159 bits (401), Expect = 3e-36
 Identities = 121/270 (44%), Positives = 147/270 (54%), Gaps = 45/270 (16%)
 Frame = +3

Query: 258 QGIGSILGSSKYERSKT---MRRTLSADMSSKKWLVQNGFSPLKRIASSEEFQVS---SD 419
           QGI SILGS  YER+K+   +RRTLSADMSSKKW  Q+GFSPLK+IASS EF +S   S 
Sbjct: 25  QGIVSILGSD-YERTKSAPSLRRTLSADMSSKKWQSQHGFSPLKKIASSGEFPISITDSS 83

Query: 420 GDSP----------------IWNS------KKEKEPPGQSDIWNSIVSQK----SSPLAT 521
             SP                IW+S      KK++E PGQ DIW+SI++QK    +  L  
Sbjct: 84  SSSPSSLEGEYERESRGRFEIWSSIQEEKEKKDQENPGQFDIWSSILTQKAQEDTKTLPP 143

Query: 522 PYVHPLAKR-ARSLSKRSLEICTESLGSETGSDGF-----XXXXXXXXXXXXXXXXXXXX 683
           PYVHPL KR A SLS++SLEICTESLGSE GSDGF                         
Sbjct: 144 PYVHPLVKRSASSLSEKSLEICTESLGSENGSDGFSSYPPSETGEAEEDKEEEQEQEEQE 203

Query: 684 XXXXAVVKQEMGG--VMKY--SSHAVKKXXXXXXXXXXXXXCQ---SGIHMRSHRKDGRL 842
               A  K +M    V KY  ++ A KK                  + + M+  R +GRL
Sbjct: 204 QEERATPKYDMEDLHVAKYNFAASATKKSSPKSFPPPLPSLSSRDGASLRMKPRRDNGRL 263

Query: 843 VLEAVPTPAPSQSYFQAQREGGRLLLTFVN 932
           VLEAV    PSQ+ FQAQR+ GRL+LTF +
Sbjct: 264 VLEAV--SVPSQNNFQAQRQDGRLVLTFAD 291



 Score =  137 bits (346), Expect = 7e-30
 Identities = 83/190 (43%), Positives = 109/190 (57%), Gaps = 36/190 (18%)
 Frame = +3

Query: 1188 KLPTGVISVHRSALMANKQLAGLTNRDPTWSPK---LEMNIGTEE-----TPFAQSLPPP 1343
            KL  GVI+VHR ALM NK +  ++NR+PTW  K   ++   G EE     TP  QSLPP 
Sbjct: 354  KLSGGVINVHRLALMMNKPML-ISNRNPTWPNKFNEVQFEEGVEEVVKPITPLTQSLPPR 412

Query: 1344 PLVSRLTP------------------SSAASSFNTYDYCWRTKAVAPP---TAVCTPHPL 1460
            P V+R+ P                  ++AASSFN Y+Y W+ K +      TA  +  P+
Sbjct: 413  PPVARMIPMPSTAVAAAGTVKAAAAAAAAASSFNAYEYYWKPKPMGTAGATTAAVSLSPI 472

Query: 1461 TQQ-------LPPINKHNKFIVHKNINPQANQELVLMRGNNADYLVPSVKGCKEPRRSLI 1619
            TQ+       L   + +N+ I+ KN+     QEL+++RGN  DYLVP  KGCKEPRRSL+
Sbjct: 473  TQKSSLSSSSLSKKDSNNRSILSKNLMVNEKQELLVLRGNKGDYLVPLSKGCKEPRRSLL 532

Query: 1620 MWEPYCIATS 1649
             WEPYCIATS
Sbjct: 533  FWEPYCIATS 542


>ref|NP_680195.2| uncharacterized protein [Arabidopsis thaliana]
           gi|334187828|ref|NP_001190360.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|122175037|sp|Q0V865.1|FAFL_ARATH RecName:
           Full=Protein FAF-like, chloroplastic; Flags: Precursor
           gi|111074178|gb|ABH04462.1| At5g22090 [Arabidopsis
           thaliana] gi|332005598|gb|AED92981.1| uncharacterized
           protein [Arabidopsis thaliana]
           gi|332005599|gb|AED92982.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 463

 Score =  152 bits (385), Expect = 2e-34
 Identities = 109/262 (41%), Positives = 140/262 (53%), Gaps = 39/262 (14%)
 Frame = +3

Query: 258 QGIGSILG--SSKYERSKTMRRTLSADMSSKKWLVQNGFSPLKRIASSE-------EFQV 410
           QGI SILG  SS    + ++RRT SAD+SSK W+ QNGFSP+KRI+SSE       E + 
Sbjct: 20  QGIVSILGGISSNTSSAPSLRRTFSADLSSKTWVSQNGFSPMKRISSSEKLRPDEEEAEE 79

Query: 411 SSDGDSPIW-------NSKKEKEP--PGQSDIWNSIVSQKSSPLAT------PYVHPLAK 545
            S     IW       N KK++E   PGQSD+W+SI+S+K    ++      PYVHPL K
Sbjct: 80  ESRSGVDIWAQIQQDKNDKKKEEEIEPGQSDVWSSILSEKKKTESSKDTVPPPYVHPLMK 139

Query: 546 RARSLSKRSLEICTESLGSETGSDGFXXXXXXXXXXXXXXXXXXXXXXXXA--------- 698
           RA SLS++SLEICTESLGSETG DGF                                  
Sbjct: 140 RASSLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVNVTETKVEEIT 199

Query: 699 ----VVKQEMGGVMKYSSHAVKKXXXXXXXXXXXXXCQSG--IHMRSHRKDGRLVLEAVP 860
               VV+QE   ++   +H ++               QSG  +HM++ R +GRLVLEAV 
Sbjct: 200 ETEIVVEQESSIIVP--NHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRDNGRLVLEAV- 256

Query: 861 TPAPSQSYFQAQREGGRLLLTF 926
              PS + F A+R+ GRLLLTF
Sbjct: 257 -SMPSHNNFSAKRQDGRLLLTF 277