BLASTX nr result

ID: Coptis24_contig00002388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002388
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301683.1| predicted protein [Populus trichocarpa] gi|2...   635   e-180
gb|ABK94934.1| unknown [Populus trichocarpa] gi|118486859|gb|ABK...   635   e-180
gb|ACJ11724.1| glutamine synthase [Gossypium hirsutum]                632   e-179
ref|XP_004145846.1| PREDICTED: glutamine synthetase cytosolic is...   629   e-178
ref|XP_002329715.1| predicted protein [Populus trichocarpa] gi|1...   627   e-177

>ref|XP_002301683.1| predicted protein [Populus trichocarpa] gi|222843409|gb|EEE80956.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  635 bits (1639), Expect = e-180
 Identities = 303/349 (86%), Positives = 322/349 (92%)
 Frame = +3

Query: 114  MSLITDLINLNLTDSTKKIIAEYIWIGGSGMDVRSKGRTLPGPVTDPSQLPKWNYDGSST 293
            MSL++DLINLNL+DST+KIIAEYIW+GGSGMD+RSKGRTLPGPV+DPS+LPKWNYDGSST
Sbjct: 1    MSLLSDLINLNLSDSTEKIIAEYIWVGGSGMDIRSKGRTLPGPVSDPSKLPKWNYDGSST 60

Query: 294  GQAPGTDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRFNAAKIFSHPDVV 473
            GQAPG DSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKR  AAKIFSHPDVV
Sbjct: 61   GQAPGEDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRCKAAKIFSHPDVV 120

Query: 474  AEVPWYGLEQEYTLLQKDVNXXXXXXXXXXXXXXXXYYCSAGADKAFGRDIVDAHYKACL 653
            AEVPWYGLEQEYTLLQKDV                 YYC AG DKAFGRDIVDAHYKACL
Sbjct: 121  AEVPWYGLEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGAGVDKAFGRDIVDAHYKACL 180

Query: 654  YAGINISGINGEVMPGQWEFQVGPSVGIAAGDELWVARYILERITELAGVVLSFDPKPIP 833
            YAGINISGINGEVMPGQWEFQVGPSVGI++GDELW ARYILERITE+AGVVLSFDPKPI 
Sbjct: 181  YAGINISGINGEVMPGQWEFQVGPSVGISSGDELWAARYILERITEVAGVVLSFDPKPIQ 240

Query: 834  GDWNGAGAHTNYSTKTMRADGGFNVIKKAIEKLGLRHEEHISAYGEGNERRLTGRHETAD 1013
            GDWNGAGAHTNYSTK+MR +GG+ VIKKAIEKLGLRH+EHI+AYGEGNERRLTGRHETAD
Sbjct: 241  GDWNGAGAHTNYSTKSMRNEGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 1014 IHTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAE 1160
            I+TF WGVANRGAS+RVGRDTEK+GKGYFEDRRPASNMDPYVVTSMIAE
Sbjct: 301  INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAE 349


>gb|ABK94934.1| unknown [Populus trichocarpa] gi|118486859|gb|ABK95264.1| unknown
            [Populus trichocarpa]
          Length = 356

 Score =  635 bits (1639), Expect = e-180
 Identities = 303/349 (86%), Positives = 322/349 (92%)
 Frame = +3

Query: 114  MSLITDLINLNLTDSTKKIIAEYIWIGGSGMDVRSKGRTLPGPVTDPSQLPKWNYDGSST 293
            MSL++DLINLNL+DST+KIIAEYIW+GGSGMD+RSKGRTLPGPV+DPS+LPKWNYDGSST
Sbjct: 1    MSLLSDLINLNLSDSTEKIIAEYIWVGGSGMDIRSKGRTLPGPVSDPSKLPKWNYDGSST 60

Query: 294  GQAPGTDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRFNAAKIFSHPDVV 473
            GQAPG DSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKR  AAKIFSHPDVV
Sbjct: 61   GQAPGEDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRCKAAKIFSHPDVV 120

Query: 474  AEVPWYGLEQEYTLLQKDVNXXXXXXXXXXXXXXXXYYCSAGADKAFGRDIVDAHYKACL 653
            AEVPWYGLEQEYTLLQKDV                 YYC AG DKAFGRDIVDAHYKACL
Sbjct: 121  AEVPWYGLEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGAGVDKAFGRDIVDAHYKACL 180

Query: 654  YAGINISGINGEVMPGQWEFQVGPSVGIAAGDELWVARYILERITELAGVVLSFDPKPIP 833
            YAGINISGINGEVMPGQWEFQVGPSVGI++GDELW ARYILERITE+AGVVLSFDPKPI 
Sbjct: 181  YAGINISGINGEVMPGQWEFQVGPSVGISSGDELWAARYILERITEVAGVVLSFDPKPIQ 240

Query: 834  GDWNGAGAHTNYSTKTMRADGGFNVIKKAIEKLGLRHEEHISAYGEGNERRLTGRHETAD 1013
            GDWNGAGAHTNYSTK+MR +GG+ VIKKAIEKLGLRH+EHI+AYGEGNERRLTGRHETAD
Sbjct: 241  GDWNGAGAHTNYSTKSMRNEGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 1014 IHTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAE 1160
            I+TF WGVANRGAS+RVGRDTEK+GKGYFEDRRPASNMDPYVVTSMIAE
Sbjct: 301  INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAE 349


>gb|ACJ11724.1| glutamine synthase [Gossypium hirsutum]
          Length = 356

 Score =  632 bits (1631), Expect = e-179
 Identities = 298/349 (85%), Positives = 321/349 (91%)
 Frame = +3

Query: 114  MSLITDLINLNLTDSTKKIIAEYIWIGGSGMDVRSKGRTLPGPVTDPSQLPKWNYDGSST 293
            MSL+ DLINLNL+D+T+KIIAEYIWIGGSGMD+RSK RTLPGPVTDPS+LPKWNYDGSST
Sbjct: 1    MSLLNDLINLNLSDTTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSST 60

Query: 294  GQAPGTDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRFNAAKIFSHPDVV 473
             QAPG DSEVILYPQAIFKDPFR+GNNILV+CD YTPAGEPIPTNKRFNAAKIFSHPDVV
Sbjct: 61   NQAPGDDSEVILYPQAIFKDPFRKGNNILVMCDAYTPAGEPIPTNKRFNAAKIFSHPDVV 120

Query: 474  AEVPWYGLEQEYTLLQKDVNXXXXXXXXXXXXXXXXYYCSAGADKAFGRDIVDAHYKACL 653
            AE PWYG+EQEYTLLQKD                  YYC  GADK+FGRDIVD+HYKACL
Sbjct: 121  AEEPWYGIEQEYTLLQKDTKWPLGWPVGGFPGPQGPYYCGVGADKSFGRDIVDSHYKACL 180

Query: 654  YAGINISGINGEVMPGQWEFQVGPSVGIAAGDELWVARYILERITELAGVVLSFDPKPIP 833
            YAG+NISGINGEVMPGQWEFQVGPSVGI+AGD++W+ARYILERITE+AGVVLSFDPKPIP
Sbjct: 181  YAGVNISGINGEVMPGQWEFQVGPSVGISAGDQIWIARYILERITEIAGVVLSFDPKPIP 240

Query: 834  GDWNGAGAHTNYSTKTMRADGGFNVIKKAIEKLGLRHEEHISAYGEGNERRLTGRHETAD 1013
            GDWNGAGAHTNYSTK+MR DGG NVIKKAIEKLGLRH+EHI+AYGEGNERRLTGRHETAD
Sbjct: 241  GDWNGAGAHTNYSTKSMRNDGGINVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 1014 IHTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAE 1160
            I++FSWGVANRGAS+RVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAE
Sbjct: 301  INSFSWGVANRGASIRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAE 349


>ref|XP_004145846.1| PREDICTED: glutamine synthetase cytosolic isozyme-like [Cucumis
            sativus] gi|449516009|ref|XP_004165040.1| PREDICTED:
            glutamine synthetase cytosolic isozyme-like [Cucumis
            sativus] gi|374676432|gb|AEZ56958.1| glutamine synthetase
            [Cucumis sativus]
          Length = 356

 Score =  629 bits (1621), Expect = e-178
 Identities = 298/349 (85%), Positives = 320/349 (91%)
 Frame = +3

Query: 114  MSLITDLINLNLTDSTKKIIAEYIWIGGSGMDVRSKGRTLPGPVTDPSQLPKWNYDGSST 293
            MSL++DL+NLNL+DST+KIIAEYIWIGGSGMD+RSK RTL GPV+DPS+LPKWNYDGSST
Sbjct: 1    MSLLSDLVNLNLSDSTEKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSKLPKWNYDGSST 60

Query: 294  GQAPGTDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRFNAAKIFSHPDVV 473
            GQAPG DSEVILYPQAIF+DPFRRGNNILV+CDTYTPAGEPIPTNKR  AAKIFSHPDVV
Sbjct: 61   GQAPGEDSEVILYPQAIFRDPFRRGNNILVVCDTYTPAGEPIPTNKRHAAAKIFSHPDVV 120

Query: 474  AEVPWYGLEQEYTLLQKDVNXXXXXXXXXXXXXXXXYYCSAGADKAFGRDIVDAHYKACL 653
            AEVPWYG+EQEYTLLQKDV                 YYC  G DKAFGRDIVDAHYKACL
Sbjct: 121  AEVPWYGIEQEYTLLQKDVKWPIGWPIGGFPGPQGPYYCGVGVDKAFGRDIVDAHYKACL 180

Query: 654  YAGINISGINGEVMPGQWEFQVGPSVGIAAGDELWVARYILERITELAGVVLSFDPKPIP 833
            YAG+NISGINGEVMPGQWEFQVGPSVGI+AGDE+WVARYILERITE+AGVVLSFDPKPI 
Sbjct: 181  YAGVNISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEIAGVVLSFDPKPIQ 240

Query: 834  GDWNGAGAHTNYSTKTMRADGGFNVIKKAIEKLGLRHEEHISAYGEGNERRLTGRHETAD 1013
            GDWNGAGAHTNYSTK+MR +GG+ VIKKAIEKL LRH+EHI+AYGEGNERRLTGRHETAD
Sbjct: 241  GDWNGAGAHTNYSTKSMREEGGYEVIKKAIEKLKLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 1014 IHTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAE 1160
            IHTFSWGVANRGASVRVGRDTEK+GKGYFEDRRPASNMDPYVVTSM+AE
Sbjct: 301  IHTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMVAE 349


>ref|XP_002329715.1| predicted protein [Populus trichocarpa] gi|118486146|gb|ABK94916.1|
            unknown [Populus trichocarpa] gi|222870623|gb|EEF07754.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  627 bits (1618), Expect = e-177
 Identities = 300/349 (85%), Positives = 319/349 (91%)
 Frame = +3

Query: 114  MSLITDLINLNLTDSTKKIIAEYIWIGGSGMDVRSKGRTLPGPVTDPSQLPKWNYDGSST 293
            MSL+TDLINLNL+D+T KIIAEYIWIGGSGMD+RSK RTL G V+DP +LPKWNYDGSST
Sbjct: 1    MSLLTDLINLNLSDTTDKIIAEYIWIGGSGMDLRSKARTLDGAVSDPQKLPKWNYDGSST 60

Query: 294  GQAPGTDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRFNAAKIFSHPDVV 473
            GQAPG DSEVILYPQAIFKDPFRRGNNILV+CD YTPAGEPIPTNKR +AAKIFSHPDVV
Sbjct: 61   GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHSAAKIFSHPDVV 120

Query: 474  AEVPWYGLEQEYTLLQKDVNXXXXXXXXXXXXXXXXYYCSAGADKAFGRDIVDAHYKACL 653
            AEVPWYGLEQEYTLLQKD+                 YYC AGADKAFGRDIVD+HYKACL
Sbjct: 121  AEVPWYGLEQEYTLLQKDLKWPLGWPVGGYPGPQGPYYCGAGADKAFGRDIVDSHYKACL 180

Query: 654  YAGINISGINGEVMPGQWEFQVGPSVGIAAGDELWVARYILERITELAGVVLSFDPKPIP 833
            YAGINISGINGEVMPGQWEFQVGPSVGI+AGDELWVARYILERITE+AGVV+SFDPKPIP
Sbjct: 181  YAGINISGINGEVMPGQWEFQVGPSVGISAGDELWVARYILERITEIAGVVVSFDPKPIP 240

Query: 834  GDWNGAGAHTNYSTKTMRADGGFNVIKKAIEKLGLRHEEHISAYGEGNERRLTGRHETAD 1013
            GDWNGAGAHTNYSTK+MR DGGF +IKKAI KL LRH+EHI+AYGEGNERRLTGRHETAD
Sbjct: 241  GDWNGAGAHTNYSTKSMRNDGGFEIIKKAIGKLQLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 1014 IHTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAE 1160
            IHTFSWGVANRGASVRVGRDTEK+GKGYFEDRRPASNMDPY+VTSMIAE
Sbjct: 301  IHTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYIVTSMIAE 349


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