BLASTX nr result

ID: Coptis24_contig00002378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002378
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34000.1| unnamed protein product [Thellungiella halophila]     291   3e-76
ref|XP_002325404.1| predicted protein [Populus trichocarpa] gi|2...   290   6e-76
emb|CAN64807.1| hypothetical protein VITISV_007145 [Vitis vinifera]   290   6e-76
ref|XP_003554002.1| PREDICTED: thioredoxin-like 1-1, chloroplast...   287   5e-75
emb|CBI29919.3| unnamed protein product [Vitis vinifera]              287   5e-75

>dbj|BAJ34000.1| unnamed protein product [Thellungiella halophila]
          Length = 274

 Score =  291 bits (745), Expect = 3e-76
 Identities = 145/233 (62%), Positives = 173/233 (74%), Gaps = 4/233 (1%)
 Frame = +1

Query: 214 LRPTSLNSDFHGFRIVLPHVQR---KLSFASSSPIQMMSLCIGKAQRWWAKGIQQNMKEI 384
           L+   L S+FHG +I++  VQ    K SF SSS     +L IG +Q+WW KG+Q+NM+EI
Sbjct: 42  LKQKPLRSEFHGKQILVGDVQNESFKKSFRSSSITAQTTLRIGTSQKWWEKGLQENMREI 101

Query: 385 SCAQDLANSLINAGDQLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKSM 564
           S AQ+L +SL NAGD+LV+VDFFSPGCGGCKALHPK+CQ AE NPDVQFLQVN+EEHKSM
Sbjct: 102 SSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKLCQLAEQNPDVQFLQVNYEEHKSM 161

Query: 565 CYSLNVHVLPFFRLYRGAHGRLCSFSCTNSTIKKFKDALAKHTTERCSLGPTKGXXXXXX 744
           CYSL VHVLPFFR YRGAHGR+CSFSCTN+TIKKF+DALAKHT +RCSLGPTKG      
Sbjct: 162 CYSLGVHVLPFFRFYRGAHGRVCSFSCTNATIKKFRDALAKHTPDRCSLGPTKGLEEKEL 221

Query: 745 XXXXXNKDLSFKYTPKPLLV-XXXXXXXXDKKVPLPSTSNKESKEKTLVTAGR 900
                NK+L+F YTPK + V         +  +P+P  S   S EKTLV+AGR
Sbjct: 222 VALAANKELNFSYTPKIVPVEEEAASPTSNPSLPVPHPSMSASDEKTLVSAGR 274


>ref|XP_002325404.1| predicted protein [Populus trichocarpa] gi|222862279|gb|EEE99785.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  290 bits (742), Expect = 6e-76
 Identities = 147/240 (61%), Positives = 175/240 (72%), Gaps = 18/240 (7%)
 Frame = +1

Query: 235 SDFHGFRIVLPHVQ---RKLSFASSSPIQMMSLCIGKAQRWWAKGIQQNMKEISCAQDLA 405
           SDF+G R+V+   Q   R+     +S + +  L +  A++WW KG+Q NM+E++ AQDL 
Sbjct: 56  SDFYGKRVVVHGNQSKPRRGYLPQASVVALTGLKLKYAKKWWEKGLQPNMREVTSAQDLV 115

Query: 406 NSLINAGDQLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKSMCYSLNVH 585
           +SL+NAGDQLV+VDFFSPGCGGCKALHPKICQ AEMNPDVQFLQVN+EEHKSMCYSLNVH
Sbjct: 116 DSLMNAGDQLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVH 175

Query: 586 VLPFFRLYRGAHGRLCSFSCTNSTIKKFKDALAKHTTERCSLGPTKGXXXXXXXXXXXNK 765
           VLPFFR YRGAHGRLCSFSCTN+TIKKFKDALAKHT ERCSLGPTKG           NK
Sbjct: 176 VLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPERCSLGPTKGLEEKELVALAANK 235

Query: 766 DLSFKYTPKPL----------LVXXXXXXXXDKKVPLP-----STSNKESKEKTLVTAGR 900
           DLSF YTPKP+          +         D+ +PLP     S S ++S+EKTLV++GR
Sbjct: 236 DLSFTYTPKPVQPAPVPAEEEVAPTAGPSHSDRGLPLPLPITSSKSAQDSEEKTLVSSGR 295


>emb|CAN64807.1| hypothetical protein VITISV_007145 [Vitis vinifera]
          Length = 311

 Score =  290 bits (742), Expect = 6e-76
 Identities = 151/252 (59%), Positives = 176/252 (69%), Gaps = 28/252 (11%)
 Frame = +1

Query: 214 LRPTSLNSDFHGFRIVLPHV----QRKLSFASSSPIQMMSLCIGKAQRWWAKGIQQNMKE 381
           L P+S NSDFHG RIVL  +    +R+ + AS +   +M L IGKAQ+WW KG+Q NMKE
Sbjct: 60  LSPSSSNSDFHGGRIVLQEIGSMPKRRNAQASCT---LMGLAIGKAQKWWEKGLQPNMKE 116

Query: 382 ISCAQDLANSLINAGDQLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKS 561
           ++ AQDL +SL+NAGD+LV+VDFFSPGCGGC+ALHPKICQ AEMNPDV+FLQVN+EEHKS
Sbjct: 117 VTGAQDLVDSLLNAGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVEFLQVNYEEHKS 176

Query: 562 MCYSLNVHVLPFFRLYRGAHGRLCSFSCTNSTIKKFKDALAKHTTERCSLGPTKGXXXXX 741
           MCYSLNVHVLPFFR YRGAHGRLCSFSCTN+TIKKFKDALAKHT +RCSL PTKG     
Sbjct: 177 MCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLEPTKGLEEKE 236

Query: 742 XXXXXXNKDLSFKYTPKPLLVXXXXXXXXDK-------------------KVPLPSTSNK 864
                 NKD SF Y+PKP+          +                     +PLPSTS K
Sbjct: 237 LLALSANKDFSFNYSPKPVPTPAQEEIAVEATSAAAXSNXELPLPLPLPLSLPLPSTSLK 296

Query: 865 -----ESKEKTL 885
                E KEKT+
Sbjct: 297 GFHDSEVKEKTV 308


>ref|XP_003554002.1| PREDICTED: thioredoxin-like 1-1, chloroplastic-like [Glycine max]
          Length = 297

 Score =  287 bits (734), Expect = 5e-75
 Identities = 147/244 (60%), Positives = 176/244 (72%), Gaps = 15/244 (6%)
 Frame = +1

Query: 214 LRPTSLNSDFHGFRIVLPHVQRKLSFASSSPIQ-----MMSLCIGKAQRWWAKGIQQNMK 378
           LR  S +S+F G ++V  HV R L    +S ++      MS  +GK Q+WW KG+Q NMK
Sbjct: 55  LRSWSSSSEFQGIKLVF-HVNRGLPNRVNSRLRASTGAQMSFRLGKVQKWWEKGLQPNMK 113

Query: 379 EISCAQDLANSLINAGDQLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHK 558
           E++ AQD  +SL++AGD+LV+VDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVN+EEHK
Sbjct: 114 EVTSAQDFVDSLLSAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHK 173

Query: 559 SMCYSLNVHVLPFFRLYRGAHGRLCSFSCTNSTIKKFKDALAKHTTERCSLGPTKGXXXX 738
           SMCYSLNVHVLPFFR YRGAHGRLCSFSCTN+TIKKFKDALAKHT +RCSLGPTKG    
Sbjct: 174 SMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLGPTKGLEEK 233

Query: 739 XXXXXXXNKDLSFKYTPKPL--------LVXXXXXXXXDKKVPLPS--TSNKESKEKTLV 888
                  NKDLSF  +P+PL        L          K +P PS   +++ SK++TL 
Sbjct: 234 ELLALAANKDLSFTNSPEPLQPAHADEELGTEPAPAPGSKSLPSPSMILNSEVSKKRTLT 293

Query: 889 TAGR 900
           T+GR
Sbjct: 294 TSGR 297


>emb|CBI29919.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  287 bits (734), Expect = 5e-75
 Identities = 150/252 (59%), Positives = 175/252 (69%), Gaps = 28/252 (11%)
 Frame = +1

Query: 214 LRPTSLNSDFHGFRIVLPHV----QRKLSFASSSPIQMMSLCIGKAQRWWAKGIQQNMKE 381
           L  +S NSDFHG RIVL  +    +R+ + AS +   +M L IGKAQ+WW KG+Q NMKE
Sbjct: 58  LSSSSSNSDFHGGRIVLQEIGSMPKRRNAQASCT---LMGLAIGKAQKWWEKGLQPNMKE 114

Query: 382 ISCAQDLANSLINAGDQLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKS 561
           ++ AQDL +SL+NAGD+LV+VDFFSPGCGGC+ALHPKICQ AEMNPDV+FLQVN+EEHKS
Sbjct: 115 VTGAQDLVDSLLNAGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVEFLQVNYEEHKS 174

Query: 562 MCYSLNVHVLPFFRLYRGAHGRLCSFSCTNSTIKKFKDALAKHTTERCSLGPTKGXXXXX 741
           MCYSLNVHVLPFFR YRGAHGRLCSFSCTN+TIKKFKDALAKHT +RCSL PTKG     
Sbjct: 175 MCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLEPTKGLEEKE 234

Query: 742 XXXXXXNKDLSFKYTPKPLLVXXXXXXXXDK-------------------KVPLPSTSNK 864
                 NKD SF Y+PKP+          +                     +PLPSTS K
Sbjct: 235 LLALSANKDFSFNYSPKPVPTPAQEEIAVEATSAAAFSNEELPLPLPLPLSLPLPSTSLK 294

Query: 865 -----ESKEKTL 885
                E KEKT+
Sbjct: 295 GFHDSEVKEKTV 306


Top