BLASTX nr result

ID: Coptis24_contig00002377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002377
         (1632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284847.1| PREDICTED: thioredoxin-like 1-1, chloroplast...   303   1e-79
ref|XP_002514739.1| Thioredoxin II, putative [Ricinus communis] ...   302   1e-79
emb|CAN77175.1| hypothetical protein VITISV_038216 [Vitis vinifera]   299   2e-78
emb|CBI15208.3| unnamed protein product [Vitis vinifera]              294   4e-77
ref|XP_004137416.1| PREDICTED: thioredoxin-like 1-1, chloroplast...   270   8e-70

>ref|XP_002284847.1| PREDICTED: thioredoxin-like 1-1, chloroplastic [Vitis vinifera]
            gi|147823327|emb|CAN64194.1| hypothetical protein
            VITISV_027123 [Vitis vinifera]
          Length = 275

 Score =  303 bits (775), Expect = 1e-79
 Identities = 156/259 (60%), Positives = 187/259 (72%), Gaps = 5/259 (1%)
 Frame = +2

Query: 533  MAVSLKTGVC---MTENGL--KTKKIVGVCSSVGCLQVKESKKTFDIPGLKNEFKGREVI 697
            MA SLKTG+C   M E     K+K +   C+S G L+ KES        L + F G+ V 
Sbjct: 1    MACSLKTGLCISGMMEASFRPKSKGVHESCASFGSLKFKESLV------LGSRFTGKHVF 54

Query: 698  VSDQSGFGDWNFKASPKFTIHAQASLCVSKALRWWDKTLKPNMVEIESAQQLVDTLVNAG 877
            ++DQ    DW+FKA  KF++HAQAS+CVS+ALRWW+KTLK NMVEI SAQ+LVD+L+NAG
Sbjct: 55   ITDQKCLRDWSFKAPYKFSVHAQASICVSRALRWWEKTLKTNMVEIHSAQELVDSLLNAG 114

Query: 878  DKLVIIDFYSPGCGGCKALHPKICQFAEMNPNALFLKVNYEELKPMCYSLNIHVLPFFRF 1057
            D+LV++DFYSP CGGCKALHPKICQ AE+NPNA+FLKV+YEELK MC++L+IHVLPFFRF
Sbjct: 115  DRLVVVDFYSPRCGGCKALHPKICQLAELNPNAIFLKVDYEELKTMCHALHIHVLPFFRF 174

Query: 1058 YRGAEGRVCSFSCTNATIKKFKDALAKHGTERCSLGPXXXXXXXXXXXXXXXXDLPLDFL 1237
            YRGAEGRVCSFSCTNATIKKFKDALAKHG  RCSLGP                ++PL+  
Sbjct: 175  YRGAEGRVCSFSCTNATIKKFKDALAKHGANRCSLGPAKGLDESELLKLAAVGEIPLNLP 234

Query: 1238 SRSASEERKQMEDMVLTNA 1294
              S+  E   MED  L  A
Sbjct: 235  LPSSKGE--VMEDSALKGA 251


>ref|XP_002514739.1| Thioredoxin II, putative [Ricinus communis]
            gi|223546343|gb|EEF47845.1| Thioredoxin II, putative
            [Ricinus communis]
          Length = 279

 Score =  302 bits (774), Expect = 1e-79
 Identities = 152/260 (58%), Positives = 192/260 (73%), Gaps = 7/260 (2%)
 Frame = +2

Query: 533  MAVSLKT-----GVCMTENGLKTKKIVGVCSSVGCLQVKESK-KTFDIPGLKNEFKGREV 694
            MA SLK+     G+  T    KT+ +   C S G +Q+ ESK K+ D P L  +FKG+ +
Sbjct: 1    MACSLKSTVNVSGLKETIFSSKTEGVFRFCQSFGVIQIGESKSKSKDFPVLSIDFKGKPL 60

Query: 695  IVSDQSG-FGDWNFKASPKFTIHAQASLCVSKALRWWDKTLKPNMVEIESAQQLVDTLVN 871
            ++SDQ G F DW+ K +   ++ AQAS+CVS+A+RWW+KTLKPNMVEI SAQ+L ++L+N
Sbjct: 61   VLSDQKGGFEDWSRKTTGNSSVQAQASICVSRAMRWWEKTLKPNMVEIHSAQELAESLLN 120

Query: 872  AGDKLVIIDFYSPGCGGCKALHPKICQFAEMNPNALFLKVNYEELKPMCYSLNIHVLPFF 1051
            AGD+LVI+DFYSPGCGGCKALHPKICQ AE NP+A+FLKVNYEELK MC SL+IHVLPFF
Sbjct: 121  AGDRLVIVDFYSPGCGGCKALHPKICQLAESNPDAIFLKVNYEELKTMCQSLHIHVLPFF 180

Query: 1052 RFYRGAEGRVCSFSCTNATIKKFKDALAKHGTERCSLGPXXXXXXXXXXXXXXXXDLPLD 1231
            RFYRGA+GR+CSFSCTNATIKKFKDALAKHG +RCSL P                +LP++
Sbjct: 181  RFYRGADGRLCSFSCTNATIKKFKDALAKHGKDRCSLSPARGLEESEILTLASVGELPIN 240

Query: 1232 FLSRSASEERKQMEDMVLTN 1291
               +S + ER  +EDM++ N
Sbjct: 241  LPLQSTNRER--VEDMIMKN 258


>emb|CAN77175.1| hypothetical protein VITISV_038216 [Vitis vinifera]
          Length = 275

 Score =  299 bits (765), Expect = 2e-78
 Identities = 154/259 (59%), Positives = 185/259 (71%), Gaps = 5/259 (1%)
 Frame = +2

Query: 533  MAVSLKTGVC---MTENGL--KTKKIVGVCSSVGCLQVKESKKTFDIPGLKNEFKGREVI 697
            MA SLKTG+C   M E     K+K +   C+S G L+ KES        L + F G+ V 
Sbjct: 1    MACSLKTGLCISGMMEASFRPKSKGVHESCASFGSLKFKESLV------LGSRFTGKHVF 54

Query: 698  VSDQSGFGDWNFKASPKFTIHAQASLCVSKALRWWDKTLKPNMVEIESAQQLVDTLVNAG 877
            ++DQ    DW+FKA  KF++HAQAS+CVS+ALRWW+KTLK NMVEI SAQ+L D+L+NAG
Sbjct: 55   ITDQKCLRDWSFKAPYKFSVHAQASICVSRALRWWEKTLKTNMVEIHSAQELXDSLLNAG 114

Query: 878  DKLVIIDFYSPGCGGCKALHPKICQFAEMNPNALFLKVNYEELKPMCYSLNIHVLPFFRF 1057
            D+LV++DFYSP CGGCKALHPKICQ AE+NPNA+FLKV+YEELK MC++L+IHVLPFF F
Sbjct: 115  DRLVVVDFYSPXCGGCKALHPKICQLAELNPNAIFLKVDYEELKTMCHALHIHVLPFFXF 174

Query: 1058 YRGAEGRVCSFSCTNATIKKFKDALAKHGTERCSLGPXXXXXXXXXXXXXXXXDLPLDFL 1237
            YRGAEGRVCSFSCTNATIKKFKDALAKHG  RCSLGP                ++PL+  
Sbjct: 175  YRGAEGRVCSFSCTNATIKKFKDALAKHGANRCSLGPAKGLDESELLKLAAVGEIPLNLP 234

Query: 1238 SRSASEERKQMEDMVLTNA 1294
              S+  E   MED  L  A
Sbjct: 235  LPSSKGE--VMEDSALKGA 251


>emb|CBI15208.3| unnamed protein product [Vitis vinifera]
          Length = 261

 Score =  294 bits (753), Expect = 4e-77
 Identities = 146/238 (61%), Positives = 176/238 (73%)
 Frame = +2

Query: 581  KTKKIVGVCSSVGCLQVKESKKTFDIPGLKNEFKGREVIVSDQSGFGDWNFKASPKFTIH 760
            K+K +   C+S G L+ KES        L + F G+ V ++DQ    DW+FKA  KF++H
Sbjct: 8    KSKGVHESCASFGSLKFKESLV------LGSRFTGKHVFITDQKCLRDWSFKAPYKFSVH 61

Query: 761  AQASLCVSKALRWWDKTLKPNMVEIESAQQLVDTLVNAGDKLVIIDFYSPGCGGCKALHP 940
            AQAS+CVS+ALRWW+KTLK NMVEI SAQ+LVD+L+NAGD+LV++DFYSP CGGCKALHP
Sbjct: 62   AQASICVSRALRWWEKTLKTNMVEIHSAQELVDSLLNAGDRLVVVDFYSPRCGGCKALHP 121

Query: 941  KICQFAEMNPNALFLKVNYEELKPMCYSLNIHVLPFFRFYRGAEGRVCSFSCTNATIKKF 1120
            KICQ AE+NPNA+FLKV+YEELK MC++L+IHVLPFFRFYRGAEGRVCSFSCTNATIKKF
Sbjct: 122  KICQLAELNPNAIFLKVDYEELKTMCHALHIHVLPFFRFYRGAEGRVCSFSCTNATIKKF 181

Query: 1121 KDALAKHGTERCSLGPXXXXXXXXXXXXXXXXDLPLDFLSRSASEERKQMEDMVLTNA 1294
            KDALAKHG  RCSLGP                ++PL+    S+  E   MED  L  A
Sbjct: 182  KDALAKHGANRCSLGPAKGLDESELLKLAAVGEIPLNLPLPSSKGE--VMEDSALKGA 237


>ref|XP_004137416.1| PREDICTED: thioredoxin-like 1-1, chloroplastic-like [Cucumis sativus]
            gi|449522867|ref|XP_004168447.1| PREDICTED:
            thioredoxin-like 1-1, chloroplastic-like [Cucumis
            sativus]
          Length = 282

 Score =  270 bits (690), Expect = 8e-70
 Identities = 134/217 (61%), Positives = 169/217 (77%), Gaps = 5/217 (2%)
 Frame = +2

Query: 533  MAVSLKTGVCMT--ENGLK---TKKIVGVCSSVGCLQVKESKKTFDIPGLKNEFKGREVI 697
            MA SLK+ + ++  E+ L+   +  I G  +S+    +K  K+    P LK +F GR ++
Sbjct: 1    MASSLKSALSVSGLEDNLRCSISSGISGFSTSISASNLKGYKQP-GFPVLKVDFLGRPLV 59

Query: 698  VSDQSGFGDWNFKASPKFTIHAQASLCVSKALRWWDKTLKPNMVEIESAQQLVDTLVNAG 877
            +SDQ+G  + N K   +FTI+AQ S+C+S+A RWW+KT KPNMVEI SAQ LVD L++AG
Sbjct: 60   ISDQNGVTNSNPKTPNRFTINAQTSICISRARRWWEKTSKPNMVEIHSAQALVDALLDAG 119

Query: 878  DKLVIIDFYSPGCGGCKALHPKICQFAEMNPNALFLKVNYEELKPMCYSLNIHVLPFFRF 1057
            D+L IIDFYSPGCGGCKALHPKICQ AE+NP+A+FLKVN+EELK MC +L++ VLPFFRF
Sbjct: 120  DRLAIIDFYSPGCGGCKALHPKICQLAELNPDAVFLKVNFEELKTMCQALHVRVLPFFRF 179

Query: 1058 YRGAEGRVCSFSCTNATIKKFKDALAKHGTERCSLGP 1168
            YRG EGRVCSFSCTNATIKKFKDALAKHGT+RCS+ P
Sbjct: 180  YRGGEGRVCSFSCTNATIKKFKDALAKHGTDRCSMLP 216


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