BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002372
         (1317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001140719.1| uncharacterized protein LOC100272794 [Zea ma...   274   3e-71
gb|EEE58414.1| hypothetical protein OsJ_09608 [Oryza sativa Japo...   268   2e-69
gb|EAY88740.1| hypothetical protein OsI_10215 [Oryza sativa Indi...   268   2e-69
ref|NP_001049123.1| Os03g0173900 [Oryza sativa Japonica Group] g...   268   2e-69
gb|ACN31149.1| unknown [Zea mays] gi|414865080|tpg|DAA43637.1| T...   262   2e-67

>ref|NP_001140719.1| uncharacterized protein LOC100272794 [Zea mays]
           gi|194700740|gb|ACF84454.1| unknown [Zea mays]
           gi|413956865|gb|AFW89514.1| putative RING zinc finger
           domain superfamily protein [Zea mays]
          Length = 249

 Score =  274 bits (701), Expect = 3e-71
 Identities = 138/252 (54%), Positives = 173/252 (68%), Gaps = 5/252 (1%)
 Frame = +1

Query: 112 MNGNRQVELHYINTGFPYTVTESFMNLFEGLTYGHVDGPFAAPVDEFEE--NAYW-QMHT 282
           M  +RQ+ELHYINTGFPYT+TESFM+ FEGLTY H D    A +D F++  N YW  MHT
Sbjct: 1   MTSSRQMELHYINTGFPYTITESFMDFFEGLTYAHAD---FALMDGFQDQGNPYWTMMHT 57

Query: 283 NSQKYAPWGT-SYYGRTHALDVDDHLSRMDGSRRTIENSSLMNNREPSPLTVHGGSSSTA 459
           NS KY   G+ +YY   HA D+DD++ R DG RRT +N++ +NN + + + + GG +   
Sbjct: 58  NSYKYGYSGSGNYYSYAHAYDIDDYMHRTDGGRRTWDNTTPVNNVDSANVVLQGGEAPRT 117

Query: 460 TLDSP-EECIRSYHDDGNSSQVVWQDNIDPDNMTYEELLDLGEAVGSHSRGLSKELIELL 636
           T ++  E+CI+  H    S QVVWQDNIDPDNMTYEELLDLGEAVG+ SRGLS+E I LL
Sbjct: 118 TANTTSEDCIQQVHQSPGSPQVVWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQECISLL 177

Query: 637 PVXXXXXXXXXXXXXXXNERCVICQMKYKRRERQITLPCKHVYHTDCGTKWLSINKACPI 816
           P+                ERCVICQM+Y+R   QITLPCKHVYH  C T+WLSINK CP+
Sbjct: 178 PI-TKYKCGFFSRKKTRRERCVICQMEYRRGNLQITLPCKHVYHASCVTRWLSINKVCPV 236

Query: 817 CYTEVFGDSSTK 852
           C+ EV G+ S +
Sbjct: 237 CFAEVPGEDSLR 248


>gb|EEE58414.1| hypothetical protein OsJ_09608 [Oryza sativa Japonica Group]
          Length = 272

 Score =  268 bits (686), Expect = 2e-69
 Identities = 137/247 (55%), Positives = 168/247 (68%), Gaps = 4/247 (1%)
 Frame = +1

Query: 112 MNGNRQVELHYINTGFPYTVTESFMNLFEGLTYGHVDGPFAAPVDEFEENAYW-QMHTNS 288
           MNG+RQ+ELHYINTGFPYT+TESFM+ FEGLTY H D   A    + + N YW  MHTNS
Sbjct: 23  MNGSRQMELHYINTGFPYTITESFMDFFEGLTYAHADFAIADAFHD-QANPYWAMMHTNS 81

Query: 289 QKYAPWGT-SYYGRTHALDVDDHLSRMDGSRRTIENSSLMNNREPSPLTVHGGSSSTA-T 462
            KY   G  +YY   H  D++D++ R DG RR  +N++ +NN E   + + GG +  A T
Sbjct: 82  YKYGYSGAGNYYSYGHVYDMNDYMHRADGGRRIWDNATPVNNTESPNVVLQGGETPHANT 141

Query: 463 LDSPEECIRSY-HDDGNSSQVVWQDNIDPDNMTYEELLDLGEAVGSHSRGLSKELIELLP 639
             + EECI+   H + +S QV+WQDNIDPDNMTYEELLDLGEAVG+ SRGLS+E I LLP
Sbjct: 142 SSTTEECIQQQVHQNSSSPQVIWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQERISLLP 201

Query: 640 VXXXXXXXXXXXXXXXNERCVICQMKYKRRERQITLPCKHVYHTDCGTKWLSINKACPIC 819
           V                ERCVICQM+Y+R   Q+TLPCKHVYH  C T+WLSINK CP+C
Sbjct: 202 VTKYKCGFFSRKKTR-RERCVICQMEYRRGNLQMTLPCKHVYHASCVTRWLSINKVCPVC 260

Query: 820 YTEVFGD 840
           + EV GD
Sbjct: 261 FAEVPGD 267


>gb|EAY88740.1| hypothetical protein OsI_10215 [Oryza sativa Indica Group]
          Length = 316

 Score =  268 bits (686), Expect = 2e-69
 Identities = 137/247 (55%), Positives = 168/247 (68%), Gaps = 4/247 (1%)
 Frame = +1

Query: 112 MNGNRQVELHYINTGFPYTVTESFMNLFEGLTYGHVDGPFAAPVDEFEENAYW-QMHTNS 288
           MNG+RQ+ELHYINTGFPYT+TESFM+ FEGLTY H D   A    + + N YW  MHTNS
Sbjct: 67  MNGSRQMELHYINTGFPYTITESFMDFFEGLTYAHADFAIADAFHD-QANPYWAMMHTNS 125

Query: 289 QKYAPWGT-SYYGRTHALDVDDHLSRMDGSRRTIENSSLMNNREPSPLTVHGGSSSTA-T 462
            KY   G  +YY   H  D++D++ R DG RR  +N++ +NN E   + + GG +  A T
Sbjct: 126 YKYGYSGAGNYYSYGHVYDMNDYMHRADGGRRIWDNATPVNNTESPNVVLQGGETPHANT 185

Query: 463 LDSPEECIRSY-HDDGNSSQVVWQDNIDPDNMTYEELLDLGEAVGSHSRGLSKELIELLP 639
             + EECI+   H + +S QV+WQDNIDPDNMTYEELLDLGEAVG+ SRGLS+E I LLP
Sbjct: 186 SSTTEECIQQQVHQNSSSPQVIWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQERISLLP 245

Query: 640 VXXXXXXXXXXXXXXXNERCVICQMKYKRRERQITLPCKHVYHTDCGTKWLSINKACPIC 819
           V                ERCVICQM+Y+R   Q+TLPCKHVYH  C T+WLSINK CP+C
Sbjct: 246 VTKYKCGFFSRKKTR-RERCVICQMEYRRGNLQMTLPCKHVYHASCVTRWLSINKVCPVC 304

Query: 820 YTEVFGD 840
           + EV GD
Sbjct: 305 FAEVPGD 311


>ref|NP_001049123.1| Os03g0173900 [Oryza sativa Japonica Group]
           gi|108706452|gb|ABF94247.1| Zinc finger, C3HC4 type
           family protein, expressed [Oryza sativa Japonica Group]
           gi|113547594|dbj|BAF11037.1| Os03g0173900 [Oryza sativa
           Japonica Group] gi|215686689|dbj|BAG88942.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 250

 Score =  268 bits (686), Expect = 2e-69
 Identities = 137/247 (55%), Positives = 168/247 (68%), Gaps = 4/247 (1%)
 Frame = +1

Query: 112 MNGNRQVELHYINTGFPYTVTESFMNLFEGLTYGHVDGPFAAPVDEFEENAYW-QMHTNS 288
           MNG+RQ+ELHYINTGFPYT+TESFM+ FEGLTY H D   A    + + N YW  MHTNS
Sbjct: 1   MNGSRQMELHYINTGFPYTITESFMDFFEGLTYAHADFAIADAFHD-QANPYWAMMHTNS 59

Query: 289 QKYAPWGT-SYYGRTHALDVDDHLSRMDGSRRTIENSSLMNNREPSPLTVHGGSSSTA-T 462
            KY   G  +YY   H  D++D++ R DG RR  +N++ +NN E   + + GG +  A T
Sbjct: 60  YKYGYSGAGNYYSYGHVYDMNDYMHRADGGRRIWDNATPVNNTESPNVVLQGGETPHANT 119

Query: 463 LDSPEECIRSY-HDDGNSSQVVWQDNIDPDNMTYEELLDLGEAVGSHSRGLSKELIELLP 639
             + EECI+   H + +S QV+WQDNIDPDNMTYEELLDLGEAVG+ SRGLS+E I LLP
Sbjct: 120 SSTTEECIQQQVHQNSSSPQVIWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQERISLLP 179

Query: 640 VXXXXXXXXXXXXXXXNERCVICQMKYKRRERQITLPCKHVYHTDCGTKWLSINKACPIC 819
           V                ERCVICQM+Y+R   Q+TLPCKHVYH  C T+WLSINK CP+C
Sbjct: 180 VTKYKCGFFSRKKTR-RERCVICQMEYRRGNLQMTLPCKHVYHASCVTRWLSINKVCPVC 238

Query: 820 YTEVFGD 840
           + EV GD
Sbjct: 239 FAEVPGD 245


>gb|ACN31149.1| unknown [Zea mays] gi|414865080|tpg|DAA43637.1| TPA: putative RING
           zinc finger domain superfamily protein [Zea mays]
          Length = 253

 Score =  262 bits (669), Expect = 2e-67
 Identities = 133/248 (53%), Positives = 166/248 (66%), Gaps = 5/248 (2%)
 Frame = +1

Query: 112 MNGNRQVELHYINTGFPYTVTESFMNLFEGLTYGHVDGPFAAPVDEFEE--NAYW-QMHT 282
           MN +RQ+ELHYINTGFPYT+TESFM+ FEGLTY H D    A  D F++  N YW  MHT
Sbjct: 1   MNSSRQMELHYINTGFPYTITESFMDFFEGLTYAHAD---FALTDGFQDQGNPYWAMMHT 57

Query: 283 NSQKYAPWGT-SYYGRTHALDVDDHLSRMDGSRRTIENSSLMNNREPSPLTVHGGSSSTA 459
           NS KY   G  +YY   H  D+DD++ R DG RR  +N++ +NN + + + + GG +   
Sbjct: 58  NSYKYGYSGPGNYYSYAHVYDIDDYMRRADGGRRIWDNTTPVNNVDSANVVLQGGEAPHT 117

Query: 460 TLDS-PEECIRSYHDDGNSSQVVWQDNIDPDNMTYEELLDLGEAVGSHSRGLSKELIELL 636
           T ++  +ECI+  H    S QVVWQDNI+PDNMTYEELLDLGEAVG+ SRGLS+E I  L
Sbjct: 118 TTNTINKECIQQVHQSPGSPQVVWQDNIEPDNMTYEELLDLGEAVGTQSRGLSQERISSL 177

Query: 637 PVXXXXXXXXXXXXXXXNERCVICQMKYKRRERQITLPCKHVYHTDCGTKWLSINKACPI 816
           PV                ERCVICQM+Y+R   Q+TLPCKHVYH  C T+WL INK CP+
Sbjct: 178 PV-TKYKCGFFSRKKTRRERCVICQMEYRRGNLQMTLPCKHVYHASCVTRWLGINKVCPV 236

Query: 817 CYTEVFGD 840
           C+ EV G+
Sbjct: 237 CFAEVPGE 244