BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002371
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312401.1| predicted protein [Populus trichocarpa] gi|2...   308   1e-81
ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus...   300   4e-79
ref|XP_004135093.1| PREDICTED: 50S ribosomal protein L15, chloro...   299   8e-79
ref|XP_002279311.2| PREDICTED: 50S ribosomal protein L15, chloro...   292   7e-77
gb|AFK35360.1| unknown [Lotus japonicus]                              288   1e-75

>ref|XP_002312401.1| predicted protein [Populus trichocarpa] gi|222852221|gb|EEE89768.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  308 bits (789), Expect = 1e-81
 Identities = 173/273 (63%), Positives = 188/273 (68%)
 Frame = -2

Query: 848 AASILSISSPFKGNLTTLKKQTSLTFQPLKLHLKQTSKRLFLPLITASSSTTVPGSISLD 669
           AAS+   SSPFKGNLT LK +T   F  L LH K     + +    A S  T        
Sbjct: 7   AASLPCPSSPFKGNLTRLKPKTC-NFTCLTLHSKNKRPSVVVNQAAAPSVVTT------- 58

Query: 668 ASSSVRFRLNNLGPQPGSXXXXXXXXXXXXXGQGGSCGFGMRGQKSRSGPGVRRGFEGGQ 489
            SS  R RL+NLGPQPGS             GQG SCGFGMRGQKSRSGPGVR+GFEGGQ
Sbjct: 59  -SSGARLRLDNLGPQPGSRKKGKRKGRGISAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQ 117

Query: 488 MPLYRRVPKLRGIAGGMSAGLPKYVPVNLKDIADAGFQEGEEVSLESLKKKGLINPSGRE 309
           MPLYRR+PKLRGIAGGM AGLPKYVPVNLKDIA AGFQEG EVSLE+LK+KGLINPSGRE
Sbjct: 118 MPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIASAGFQEGAEVSLETLKEKGLINPSGRE 177

Query: 308 RTLPLKILGDGEXXXXXXXXXXXXXXXXXXXXXXXILGDGELTVKLNIKARAFSASAKEK 129
           R LPLK+L                             GDGEL+VKLNIKARAFSA+AKEK
Sbjct: 178 RRLPLKVL-----------------------------GDGELSVKLNIKARAFSAAAKEK 208

Query: 128 LEAVGCALTVLPGRKKWVKPSVAKNIARADEYF 30
           LEA GC+LTVLPGRKKWVKPSVAKN+ARA+EYF
Sbjct: 209 LEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYF 241


>ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus communis]
           gi|223528739|gb|EEF30749.1| 50S ribosomal protein L15,
           putative [Ricinus communis]
          Length = 263

 Score =  300 bits (767), Expect = 4e-79
 Identities = 169/266 (63%), Positives = 187/266 (70%)
 Frame = -2

Query: 827 SSPFKGNLTTLKKQTSLTFQPLKLHLKQTSKRLFLPLITASSSTTVPGSISLDASSSVRF 648
           SS FKGNLT+L+ +T  T  PL  +  +      L +I  + ST      S  ASS VRF
Sbjct: 13  SSHFKGNLTSLRLKTC-TLIPLNFNNAKPKGTQQLVVINQARSTAAAAIQS--ASSGVRF 69

Query: 647 RLNNLGPQPGSXXXXXXXXXXXXXGQGGSCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRV 468
           RL+NLGPQ GS             GQG SCGFGMRGQKSRSGPGVR+GFEGGQMPLYRR+
Sbjct: 70  RLDNLGPQRGSRKRGKRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 129

Query: 467 PKLRGIAGGMSAGLPKYVPVNLKDIADAGFQEGEEVSLESLKKKGLINPSGRERTLPLKI 288
           PKLRGIAGGM AGLPK+VPVNLKDI  AGFQEGEEVSLE+LK+KGLINPSGRER LPLKI
Sbjct: 130 PKLRGIAGGMHAGLPKFVPVNLKDIEAAGFQEGEEVSLETLKEKGLINPSGRERRLPLKI 189

Query: 287 LGDGEXXXXXXXXXXXXXXXXXXXXXXXILGDGELTVKLNIKARAFSASAKEKLEAVGCA 108
           L                             GDGEL+VK+NIKARAFS SAKEKLEA GC+
Sbjct: 190 L-----------------------------GDGELSVKVNIKARAFSTSAKEKLEAAGCS 220

Query: 107 LTVLPGRKKWVKPSVAKNIARADEYF 30
           LTVLPGRKKWVKPSVAKN+ARA+EYF
Sbjct: 221 LTVLPGRKKWVKPSVAKNLARAEEYF 246


>ref|XP_004135093.1| PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Cucumis
           sativus] gi|449512847|ref|XP_004164157.1| PREDICTED: 50S
           ribosomal protein L15, chloroplastic-like [Cucumis
           sativus]
          Length = 268

 Score =  299 bits (765), Expect = 8e-79
 Identities = 169/287 (58%), Positives = 194/287 (67%), Gaps = 15/287 (5%)
 Frame = -2

Query: 845 ASILSISSP---------------FKGNLTTLKKQTSLTFQPLKLHLKQTSKRLFLPLIT 711
           A++ S+SSP               FKGN+  L  +  L+   L+L  K    +  +    
Sbjct: 2   AALFSLSSPSLTRTATALPYPTTSFKGNVNILNSK-HLSISSLRLKSKSVDGKHLVVRNQ 60

Query: 710 ASSSTTVPGSISLDASSSVRFRLNNLGPQPGSXXXXXXXXXXXXXGQGGSCGFGMRGQKS 531
           A++S     S+S   + +VRFRL+NLGPQPGS             GQGGSCGFGMRGQKS
Sbjct: 61  AAAS-----SLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKS 115

Query: 530 RSGPGVRRGFEGGQMPLYRRVPKLRGIAGGMSAGLPKYVPVNLKDIADAGFQEGEEVSLE 351
           RSGPGVR+GFEGGQMPLYRR+PKLRGIAGGM AGLPKYVPVNLKDI +AGFQEGEEVSLE
Sbjct: 116 RSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLE 175

Query: 350 SLKKKGLINPSGRERTLPLKILGDGEXXXXXXXXXXXXXXXXXXXXXXXILGDGELTVKL 171
           SLK+KGLINPSGRER LPLKI                             L DGEL+VKL
Sbjct: 176 SLKEKGLINPSGRERKLPLKI-----------------------------LADGELSVKL 206

Query: 170 NIKARAFSASAKEKLEAVGCALTVLPGRKKWVKPSVAKNIARADEYF 30
           NIKARAFS++AKEKLEA GC+LTVLPGRKKWVKPSVAKN+ARA+EYF
Sbjct: 207 NIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYF 253


>ref|XP_002279311.2| PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Vitis
           vinifera] gi|297737813|emb|CBI27014.3| unnamed protein
           product [Vitis vinifera]
          Length = 262

 Score =  292 bits (748), Expect = 7e-77
 Identities = 161/266 (60%), Positives = 185/266 (69%)
 Frame = -2

Query: 827 SSPFKGNLTTLKKQTSLTFQPLKLHLKQTSKRLFLPLITASSSTTVPGSISLDASSSVRF 648
           SSPFKGN+  LK      F  +KL +K+  ++  + + +  S ++V          +VRF
Sbjct: 23  SSPFKGNVRNLKANPC-QFLTIKLEVKEKVRKSGVVVASQGSPSSVV--------DNVRF 73

Query: 647 RLNNLGPQPGSXXXXXXXXXXXXXGQGGSCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRV 468
           RL+NLGPQPGS             GQG SCGFGMRGQKSRSGPGV +GFEGGQMPLYRR+
Sbjct: 74  RLDNLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRSGPGVMKGFEGGQMPLYRRI 133

Query: 467 PKLRGIAGGMSAGLPKYVPVNLKDIADAGFQEGEEVSLESLKKKGLINPSGRERTLPLKI 288
           PKLRGIAGGM AGLPKYVPVNLKDI  AGFQEGEEVSL+SLKKKGLINPSGRER LPLK 
Sbjct: 134 PKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSLKKKGLINPSGRERRLPLK- 192

Query: 287 LGDGEXXXXXXXXXXXXXXXXXXXXXXXILGDGELTVKLNIKARAFSASAKEKLEAVGCA 108
                                       ILG G+L+VKLNIKARAFS+SAKEKLEA GC+
Sbjct: 193 ----------------------------ILGAGDLSVKLNIKARAFSSSAKEKLEAAGCS 224

Query: 107 LTVLPGRKKWVKPSVAKNIARADEYF 30
           +TVLPGRKKW+KPSV KN+ARA+EYF
Sbjct: 225 ITVLPGRKKWLKPSVIKNLARAEEYF 250


>gb|AFK35360.1| unknown [Lotus japonicus]
          Length = 256

 Score =  288 bits (737), Expect = 1e-75
 Identities = 164/282 (58%), Positives = 187/282 (66%), Gaps = 8/282 (2%)
 Frame = -2

Query: 851 MAASILSISS--------PFKGNLTTLKKQTSLTFQPLKLHLKQTSKRLFLPLITASSST 696
           + AS+L +SS        PFKG L TL+ +  L  Q  +            P +   +S 
Sbjct: 2   VTASLLPVSSWLPPPLPSPFKGTLKTLEARPCLKIQRPR------------PRVFVVTSA 49

Query: 695 TVPGSISLDASSSVRFRLNNLGPQPGSXXXXXXXXXXXXXGQGGSCGFGMRGQKSRSGPG 516
             P S+S   +  VRFRL+NLGPQPGS             GQG SCGFGMRGQKSRSGPG
Sbjct: 50  AAPVSVSAP-NVGVRFRLDNLGPQPGSRKKAKRKGRGISAGQGASCGFGMRGQKSRSGPG 108

Query: 515 VRRGFEGGQMPLYRRVPKLRGIAGGMSAGLPKYVPVNLKDIADAGFQEGEEVSLESLKKK 336
           VRRGFEGGQMPLYRR+PKLRGIAGGMSAGLPKYV VNL+DI  A FQ+G+EVSLESLK+K
Sbjct: 109 VRRGFEGGQMPLYRRIPKLRGIAGGMSAGLPKYVHVNLRDIEGAKFQDGDEVSLESLKEK 168

Query: 335 GLINPSGRERTLPLKILGDGEXXXXXXXXXXXXXXXXXXXXXXXILGDGELTVKLNIKAR 156
           G+INPSGRER LPLKI                             LG+GEL+ KL +KAR
Sbjct: 169 GVINPSGRERRLPLKI-----------------------------LGEGELSKKLTVKAR 199

Query: 155 AFSASAKEKLEAVGCALTVLPGRKKWVKPSVAKNIARADEYF 30
           AFS SAKEKLE++GC+LTVLPGRKKWVKPSVAKNIARADEYF
Sbjct: 200 AFSTSAKEKLESIGCSLTVLPGRKKWVKPSVAKNIARADEYF 241