BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002346
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37631.1| unknown [Medicago truncatula]                          296   5e-78
ref|XP_003595972.1| Ribosomal L1 domain-containing protein [Medi...   296   5e-78
ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing pr...   293   5e-77
ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1...   293   7e-77
ref|XP_004143917.1| PREDICTED: ribosomal L1 domain-containing pr...   293   7e-77

>gb|AFK37631.1| unknown [Medicago truncatula]
          Length = 432

 Score =  296 bits (759), Expect = 5e-78
 Identities = 154/294 (52%), Positives = 201/294 (68%), Gaps = 1/294 (0%)
 Frame = -3

Query: 1022 NPTTIGKAVDALLKYNKSQAKNQKAQLLEHDD-FIYLILTLKKIPSKGRTNPYKIPLPSP 846
            N  T+ KAVD+LLK+ KS+ + +K +L + D+ F+YLILTLKKIPSKGR NP+KIP+P  
Sbjct: 7    NSDTVAKAVDSLLKWRKSRLETEKPKLFDEDEEFVYLILTLKKIPSKGRVNPHKIPIPHS 66

Query: 845  FHPFDSSEELCLIIDDRSKTKFSLTSEAAKKKVQAENIPXXXXXXXXXXXSDYKPFEAKR 666
                 ++ E CLIIDDR+     +T + A+KKVQ+E+IP           +DY+PFEAKR
Sbjct: 67   L--ISAASEQCLIIDDRANKPSRITKDEAQKKVQSESIPISKILKLSKLMTDYRPFEAKR 124

Query: 665  KLCTSYDMFFADKRIIPLLPRQLGKEXXXXXXXXXPVDLSHKNWKEQIKGACEAALFYLR 486
            KLC SYD+FFADK I+PLLPR LGK+          VDL  KNWKEQI+ AC +AL +LR
Sbjct: 125  KLCNSYDLFFADKAIVPLLPRLLGKQFFKKRKIPVQVDLQKKNWKEQIEKACSSALLFLR 184

Query: 485  TGTCSVIKIGKVSQERNEIVDNVVAAVKGIVEIVPKKWGNVRSLHLKLSESLALPVYQTV 306
            TGTCSV+K+ K+S ER+EIV+NVVAA++G+VE++PKKW  VRS H+KL ESLALPVYQ V
Sbjct: 185  TGTCSVVKVAKLSMERDEIVENVVAAMEGVVEVLPKKWAVVRSFHVKLLESLALPVYQAV 244

Query: 305  PDIGMKIAGVEKREEKMDVDXXXXXXXXXXXXXXXXXXXXXXXXRIHEIQYLDN 144
            PD+ +KI GV+  E+K+  D                        RIHEI+Y+D+
Sbjct: 245  PDVRLKIEGVKDLEDKLVKD----------EKKVKDAKKSKKKGRIHEIKYMDD 288


>ref|XP_003595972.1| Ribosomal L1 domain-containing protein [Medicago truncatula]
            gi|355485020|gb|AES66223.1| Ribosomal L1
            domain-containing protein [Medicago truncatula]
          Length = 432

 Score =  296 bits (759), Expect = 5e-78
 Identities = 154/294 (52%), Positives = 201/294 (68%), Gaps = 1/294 (0%)
 Frame = -3

Query: 1022 NPTTIGKAVDALLKYNKSQAKNQKAQLLEHDD-FIYLILTLKKIPSKGRTNPYKIPLPSP 846
            N  T+ KAVD+LLK+ KS+ + +K +L + D+ F+YLILTLKKIPSKGR NP+KIP+P  
Sbjct: 7    NSDTVAKAVDSLLKWRKSRLETEKPKLFDEDEEFVYLILTLKKIPSKGRVNPHKIPIPHS 66

Query: 845  FHPFDSSEELCLIIDDRSKTKFSLTSEAAKKKVQAENIPXXXXXXXXXXXSDYKPFEAKR 666
                 ++ E CLIIDDR+     +T + A+KKVQ+E+IP           +DY+PFEAKR
Sbjct: 67   L--ISAASEQCLIIDDRANKPSRITKDEAQKKVQSESIPISKILKLSKLMTDYRPFEAKR 124

Query: 665  KLCTSYDMFFADKRIIPLLPRQLGKEXXXXXXXXXPVDLSHKNWKEQIKGACEAALFYLR 486
            KLC SYD+FFADK I+PLLPR LGK+          VDL  KNWKEQI+ AC +AL +LR
Sbjct: 125  KLCNSYDLFFADKAIVPLLPRLLGKQFFKKRKIPVQVDLQKKNWKEQIEKACSSALLFLR 184

Query: 485  TGTCSVIKIGKVSQERNEIVDNVVAAVKGIVEIVPKKWGNVRSLHLKLSESLALPVYQTV 306
            TGTCSV+K+ K+S ER+EIV+NVVAA++G+VE++PKKW  VRS H+KL ESLALPVYQ V
Sbjct: 185  TGTCSVVKVAKLSMERDEIVENVVAAMEGVVEVLPKKWAVVRSFHVKLLESLALPVYQAV 244

Query: 305  PDIGMKIAGVEKREEKMDVDXXXXXXXXXXXXXXXXXXXXXXXXRIHEIQYLDN 144
            PD+ +KI GV+  E+K+  D                        RIHEI+Y+D+
Sbjct: 245  PDVRLKIEGVKDLEDKLVKD----------EKKVKDAKKSKKKGRIHEIKYMDD 288


>ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Glycine
            max]
          Length = 408

 Score =  293 bits (750), Expect = 5e-77
 Identities = 164/338 (48%), Positives = 221/338 (65%), Gaps = 2/338 (0%)
 Frame = -3

Query: 1034 SSDLNPTTIGKAVDALLKYNKSQAKNQKAQLL-EHDDFIYLILTLKKIPSKGRTNPYKIP 858
            S +++P T+ KAVDALL++ +SQ++ QK +LL E ++F+YLILTLKKIPSK R NP+KIP
Sbjct: 3    SENVSPETVSKAVDALLQWRRSQSEIQKPKLLGEDEEFVYLILTLKKIPSKSRVNPHKIP 62

Query: 857  LP-SPFHPFDSSEELCLIIDDRSKTKFSLTSEAAKKKVQAENIPXXXXXXXXXXXSDYKP 681
            LP S   PF    E CLI+DDR   K  +T   A+ K+Q+E+IP           SDY+P
Sbjct: 63   LPHSLISPFS---EQCLILDDRPN-KARVTKAQAQAKIQSESIPVHKVLKLSKLASDYRP 118

Query: 680  FEAKRKLCTSYDMFFADKRIIPLLPRQLGKEXXXXXXXXXPVDLSHKNWKEQIKGACEAA 501
            FEAKRKLC SYD+FFA+K I+PLLPR LGK          PVDL   +WKEQ++ AC +A
Sbjct: 119  FEAKRKLCDSYDLFFAEKSIVPLLPRLLGKSFFKKRKIPVPVDLKKGSWKEQVERACSSA 178

Query: 500  LFYLRTGTCSVIKIGKVSQERNEIVDNVVAAVKGIVEIVPKKWGNVRSLHLKLSESLALP 321
            + ++RTGTCSV+++ KV  ER+EIV+NVVAA++GIVE+VPKKWGNVRSLHLKL ES+ALP
Sbjct: 179  MLFMRTGTCSVVRVAKVRMERDEIVENVVAAIEGIVEVVPKKWGNVRSLHLKLLESVALP 238

Query: 320  VYQTVPDIGMKIAGVEKREEKMDVDXXXXXXXXXXXXXXXXXXXXXXXXRIHEIQYLDNN 141
            VYQTVPD+ +KI G +  E+K + +                        RIHE++Y+D N
Sbjct: 239  VYQTVPDVKLKIEGFKVEEKKNEKE---RDGEVSDSIEGGTEKKKKKKGRIHEVRYMDEN 295

Query: 140  XXXXXXXXXXXXXXXEINVNALVEVLDKKRKKSESAQM 27
                             + ++  E++ KKRKK  S+++
Sbjct: 296  VVEAGMEDELASD----DDDSEDEMVSKKRKKGVSSEL 329


>ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1 domain-containing
            protein 1-like [Cucumis sativus]
          Length = 364

 Score =  293 bits (749), Expect = 7e-77
 Identities = 160/308 (51%), Positives = 204/308 (66%), Gaps = 4/308 (1%)
 Frame = -3

Query: 1052 MALED--PSSDLNPTTIGKAVDALLKYNKSQAKNQKAQLLEHDDFIYLILTLKKIPSKGR 879
            MAL D  P++ +   T  KAV++LL++  S  K +K QL + +DF+YLI+TLKKIP KGR
Sbjct: 1    MALADVTPTTKVRRETAAKAVESLLQWRNS--KREKPQLFDQEDFLYLIVTLKKIPPKGR 58

Query: 878  TNPYKIPLPSPFHPFDSSEELCLIIDDRSKTKFSLTSEAAKKKVQAENIPXXXXXXXXXX 699
            TNPYKIPLP   H    S ELCLIIDDR  TK +LT + A+KK+Q+ENIP          
Sbjct: 59   TNPYKIPLPHSLH--SDSSELCLIIDDR--TKSNLTKDDARKKIQSENIPISKVIKLSKL 114

Query: 698  XSDYKPFEAKRKLCTSYDMFFADKRIIPLLPRQLGKEXXXXXXXXXPVDLSHKNWKEQIK 519
             SDY+PFEAKRKLC SYDMFFAD R+IPLLP  LGK          P++L HKNWKEQ++
Sbjct: 115  KSDYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVE 174

Query: 518  GACEAALFYLRTGTCSVIKIGKVSQERNEIVDNVVAAVKGIVEIVPKKWGNVRSLHLKLS 339
             +C + L YLRTGTCSV+K+ + S E  EIVDNV+AA+ GI E+VPKKW NVRS  LK+ 
Sbjct: 175  RSCSSGLLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFXLKVL 234

Query: 338  ESLALPVYQTVPDIGMKI-AGVEKREEKM-DVDXXXXXXXXXXXXXXXXXXXXXXXXRIH 165
            ES+ALP+YQTVP++  KI AGV+ +E+++   +                        RIH
Sbjct: 235  ESIALPIYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKERKLSKKKGRIH 294

Query: 164  EIQYLDNN 141
            EI+Y+D N
Sbjct: 295  EIRYMDTN 302


>ref|XP_004143917.1| PREDICTED: ribosomal L1 domain-containing protein 1-like isoform 1
            [Cucumis sativus] gi|449452342|ref|XP_004143918.1|
            PREDICTED: ribosomal L1 domain-containing protein 1-like
            isoform 2 [Cucumis sativus]
          Length = 364

 Score =  293 bits (749), Expect = 7e-77
 Identities = 160/308 (51%), Positives = 204/308 (66%), Gaps = 4/308 (1%)
 Frame = -3

Query: 1052 MALED--PSSDLNPTTIGKAVDALLKYNKSQAKNQKAQLLEHDDFIYLILTLKKIPSKGR 879
            MAL D  P++ +   T  KAV++LL++  S  K +K QL + +DF+YLI+TLKKIP KGR
Sbjct: 1    MALADVTPTTKVRRETAAKAVESLLQWRNS--KREKPQLFDQEDFLYLIVTLKKIPPKGR 58

Query: 878  TNPYKIPLPSPFHPFDSSEELCLIIDDRSKTKFSLTSEAAKKKVQAENIPXXXXXXXXXX 699
            TNPYKIPLP   H    S ELCLIIDDR  TK +LT + A+KK+Q+ENIP          
Sbjct: 59   TNPYKIPLPHSLH--SDSSELCLIIDDR--TKSNLTKDDARKKIQSENIPISKVIKLSKL 114

Query: 698  XSDYKPFEAKRKLCTSYDMFFADKRIIPLLPRQLGKEXXXXXXXXXPVDLSHKNWKEQIK 519
             SDY+PFEAKRKLC SYDMFFAD R+IPLLP  LGK          P++L HKNWKEQ++
Sbjct: 115  KSDYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVE 174

Query: 518  GACEAALFYLRTGTCSVIKIGKVSQERNEIVDNVVAAVKGIVEIVPKKWGNVRSLHLKLS 339
             +C + L YLRTGTCSV+K+ + S E  EIVDNV+AA+ GI E+VPKKW NVRS  LK+ 
Sbjct: 175  RSCSSGLLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVL 234

Query: 338  ESLALPVYQTVPDIGMKI-AGVEKREEKM-DVDXXXXXXXXXXXXXXXXXXXXXXXXRIH 165
            ES+ALP+YQTVP++  KI AGV+ +E+++   +                        RIH
Sbjct: 235  ESIALPIYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKERKLSKKKGRIH 294

Query: 164  EIQYLDNN 141
            EI+Y+D N
Sbjct: 295  EIRYMDTN 302