BLASTX nr result

ID: Coptis24_contig00002319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002319
         (1805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane prot...   422   e-115
ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64...   397   e-108
ref|XP_003535025.1| PREDICTED: uncharacterized protein LOC100800...   383   e-103
ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|2...   381   e-103
ref|XP_002519396.1| conserved hypothetical protein [Ricinus comm...   380   e-103

>ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis
            vinifera] gi|297739420|emb|CBI29602.3| unnamed protein
            product [Vitis vinifera]
          Length = 320

 Score =  422 bits (1085), Expect = e-115
 Identities = 215/319 (67%), Positives = 237/319 (74%), Gaps = 3/319 (0%)
 Frame = +1

Query: 646  MVNSPEEESK---NAGAHAREDSEYVSLVISNDLRIGETDFLQAHSETRNKSLIWWLKAX 816
            M NS EE  K   N+G   RE+SEYV LVISN+ R+ E D LQ  +ETR KS IWW KA 
Sbjct: 1    MPNSSEETDKLNTNSGHDVREESEYVRLVISNEARLSEADILQPQAETRIKSFIWWFKAL 60

Query: 817  XXXXXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 996
                       V LKW APF+ EK+LLPI+ WEATAFGR                  IPS
Sbjct: 61   IFCVVNIIFLLVFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLIPS 120

Query: 997  GPSMWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAAIIRLAG 1176
            GPSMWLAGMIFGYGLGFVIIM+GTTIGM LPYLIGLLFRDRIHQWLKRWP+KAA+IRLAG
Sbjct: 121  GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFRDRIHQWLKRWPQKAAMIRLAG 180

Query: 1177 EGSWLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYSGKLI 1356
            EGSW HQFRVVA+FR+SPFPYTIFNYAIVVT+M FWPY+ GSIAGM+PEAFIYIYSG+LI
Sbjct: 181  EGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMTFWPYLWGSIAGMVPEAFIYIYSGRLI 240

Query: 1357 RTLADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESSAAIG 1536
            RTLADV+YGN HLTT+EI+YN IS             YAKRALNELK  E NGE  A+  
Sbjct: 241  RTLADVQYGNQHLTTLEIIYNIISFIVAIITTVAFTIYAKRALNELKM-ETNGE-EASTS 298

Query: 1537 GLDSFEIEKLPLERPKHLG 1593
             L SFE+EKLPLERPKHLG
Sbjct: 299  ELSSFEMEKLPLERPKHLG 317


>ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64 family membrane protein
            slr0305 [Vitis vinifera]
          Length = 324

 Score =  397 bits (1019), Expect = e-108
 Identities = 207/323 (64%), Positives = 231/323 (71%), Gaps = 7/323 (2%)
 Frame = +1

Query: 646  MVNSPEEESK---NAGAHAREDSEYVSLVISNDLRIGETDFLQAHSETRNKSLIWWLKAX 816
            M NS EE  K   N+G + RE+SEYV LVISN+ R+ E D LQ  +ETR KS IWWLKA 
Sbjct: 1    MPNSSEETDKLNTNSGHNVREESEYVRLVISNEARLSEADILQPQAETRIKSFIWWLKAL 60

Query: 817  XXXXXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 996
                       + LKW APF+ EK+LLPI+ WEATAFGR                  IPS
Sbjct: 61   IFCVVNVIFLLIFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLIPS 120

Query: 997  GPSMWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIH----QWLKRWPEKAAII 1164
            GPSMWLAGMIFGYGLGFVIIM+GTTIGM LPYLIGLLFRDRIH    +   RW     +I
Sbjct: 121  GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFRDRIHVSDXELAFRWXXXXXMI 180

Query: 1165 RLAGEGSWLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYS 1344
            RLAGEGSW HQFRVVA+FR+SPFPYTIFNYAIVVT+M FWPY+ GSIAGM+PEAFIYIYS
Sbjct: 181  RLAGEGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMTFWPYLWGSIAGMVPEAFIYIYS 240

Query: 1345 GKLIRTLADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESS 1524
            G+LIRTLADV+YGN HLTT+EI+YN IS             YAKRALNELK  E NGE  
Sbjct: 241  GRLIRTLADVQYGNQHLTTLEIIYNIISFIVAIITTVAFTIYAKRALNELKM-ETNGE-E 298

Query: 1525 AAIGGLDSFEIEKLPLERPKHLG 1593
            A+   L SFE+EKLPLERPKHLG
Sbjct: 299  ASTSELSSFEMEKLPLERPKHLG 321


>ref|XP_003535025.1| PREDICTED: uncharacterized protein LOC100800730 [Glycine max]
          Length = 312

 Score =  383 bits (983), Expect = e-103
 Identities = 192/305 (62%), Positives = 221/305 (72%), Gaps = 2/305 (0%)
 Frame = +1

Query: 655  SPEEESKNA--GAHAREDSEYVSLVISNDLRIGETDFLQAHSETRNKSLIWWLKAXXXXX 828
            S E+  K+A  G H R +SEYV L IS++LR+ ET+ LQ  +E+R KS  WW+KA     
Sbjct: 6    SAEDLEKHAISGHHVRGNSEYVRLAISDELRVVETEMLQPLAESRMKSFRWWIKALLWCF 65

Query: 829  XXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPSGPSM 1008
                   V LKW  PF  EKVL PI++WEATAFGR                  IPSGPSM
Sbjct: 66   VIVVLGLVILKWGVPFTFEKVLYPIMEWEATAFGRPVLALVLVASLALFPVFFIPSGPSM 125

Query: 1009 WLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAAIIRLAGEGSW 1188
            WLAGMIFGYGLGFVIIMVGTTIGM LPYLIGL+FRDRIHQWLKRWP+ AA+IRLAGEGSW
Sbjct: 126  WLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLIFRDRIHQWLKRWPKNAAMIRLAGEGSW 185

Query: 1189 LHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYSGKLIRTLA 1368
             HQF+VVA+FR+SPFPYTIFNYA+VVTNMRFWPY+CGSIAGM+PEAFIYIYSG+LIRTLA
Sbjct: 186  FHQFQVVALFRVSPFPYTIFNYAVVVTNMRFWPYLCGSIAGMVPEAFIYIYSGRLIRTLA 245

Query: 1369 DVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESSAAIGGLDS 1548
            D +YG H LTTVEI+YN IS             YAKR LNELK  E N E +A++ G  +
Sbjct: 246  DAQYGKHQLTTVEIIYNIISFIVAVVTTIAFTVYAKRTLNELKIAEAN-EEAASVSGSSN 304

Query: 1549 FEIEK 1563
             E+ K
Sbjct: 305  LEMGK 309


>ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|222832956|gb|EEE71433.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  381 bits (978), Expect = e-103
 Identities = 194/325 (59%), Positives = 229/325 (70%), Gaps = 3/325 (0%)
 Frame = +1

Query: 646  MVNSPEEESKNAGA---HAREDSEYVSLVISNDLRIGETDFLQAHSETRNKSLIWWLKAX 816
            M  +  E  K++G    + REDSEYV LVIS++ R+G+ D  Q  S  R K+ I W+KA 
Sbjct: 1    MAETAVESRKDSGKLEHNVREDSEYVRLVISDEPRVGDFDISQVQSRARIKAFIRWIKAL 60

Query: 817  XXXXXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 996
                       V LKW   FL +KVLLP+++WEATAFGR                  IPS
Sbjct: 61   IWCLVIATLVLVFLKWGVSFLFDKVLLPMMEWEATAFGRPVLSLVLTASLALFPVFLIPS 120

Query: 997  GPSMWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAAIIRLAG 1176
            GPSMWLAGMIFGYG+GFVIIMVGTTIGM LPYLIGL+FRDRIHQWLKRWP+KA++IRLAG
Sbjct: 121  GPSMWLAGMIFGYGIGFVIIMVGTTIGMVLPYLIGLVFRDRIHQWLKRWPQKASMIRLAG 180

Query: 1177 EGSWLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYSGKLI 1356
            EGSW HQF+VVAIFR+SPFPYTIFNYAIVVT+MRFWPY+ GS++GM+PEAFIYIYSG+LI
Sbjct: 181  EGSWFHQFKVVAIFRVSPFPYTIFNYAIVVTSMRFWPYLWGSVSGMVPEAFIYIYSGRLI 240

Query: 1357 RTLADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESSAAIG 1536
            RT ADV+YGN+HLTTVEI+YN IS             YAKRAL EL++ E   E   +  
Sbjct: 241  RTFADVKYGNYHLTTVEIIYNIISFIIAIVTTVAFTIYAKRALKELERAEATEEVPPS-- 298

Query: 1537 GLDSFEIEKLPLERPKHLGTFPFPL 1611
              +S E+ KLPLERPK  G   F L
Sbjct: 299  HQESHEMGKLPLERPKRAGLSSFSL 323


>ref|XP_002519396.1| conserved hypothetical protein [Ricinus communis]
            gi|223541463|gb|EEF43013.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 327

 Score =  380 bits (976), Expect = e-103
 Identities = 198/322 (61%), Positives = 219/322 (68%), Gaps = 6/322 (1%)
 Frame = +1

Query: 664  EESKNAGAHAREDSEYVSLVISNDLRIGETDFLQAH------SETRNKSLIWWLKAXXXX 825
            +E  N     REDSEYV LVI N    G     Q H      + +  KS +WW KA    
Sbjct: 10   KEGANCEGRVREDSEYVRLVIPNASNPGLPQ--QIHILHPQPNPSSTKSFLWWTKALAFS 67

Query: 826  XXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPSGPS 1005
                       KW  PFL +KVL PILQWEATAFGR                  IPSGPS
Sbjct: 68   FLVILLLLAFFKWGLPFLFQKVLFPILQWEATAFGRPVLALVLIASLAVFPIFLIPSGPS 127

Query: 1006 MWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAAIIRLAGEGS 1185
            MWLAGMIFGYG+GFVIIMVGTTIGM LPYLIGLLFRDRIHQWLKRWP+KAA+IRLAGEGS
Sbjct: 128  MWLAGMIFGYGMGFVIIMVGTTIGMILPYLIGLLFRDRIHQWLKRWPQKAAMIRLAGEGS 187

Query: 1186 WLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYSGKLIRTL 1365
            W HQFRVVA+FR+SPFPYTIFNYAIVVT+MRFWPY+CGSIAGM+PEAFIYIYSG+LIRT 
Sbjct: 188  WFHQFRVVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSIAGMVPEAFIYIYSGRLIRTF 247

Query: 1366 ADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESSAAIGGLD 1545
            ADV+YGNHHLTTVEI+YN IS             YAKRAL EL+  E   E  A+  G  
Sbjct: 248  ADVKYGNHHLTTVEIIYNVISFIIAIITTVAFTVYAKRALKELEGIETTEEVPASHQG-- 305

Query: 1546 SFEIEKLPLERPKHLGTFPFPL 1611
            S+E+ KLPLERP  +G   F L
Sbjct: 306  SYEMGKLPLERPAQVGLSSFSL 327


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