BLASTX nr result

ID: Coptis24_contig00002277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002277
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27714.3| unnamed protein product [Vitis vinifera]              134   3e-62
ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vi...   134   3e-62
ref|XP_002518026.1| serine palmitoyltransferase I, putative [Ric...   129   3e-60
ref|XP_002867012.1| ATLCB1 [Arabidopsis lyrata subsp. lyrata] gi...   132   4e-60
dbj|BAH20117.1| AT4G36480 [Arabidopsis thaliana]                      132   4e-60

>emb|CBI27714.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  134 bits (338), Expect(2) = 3e-62
 Identities = 58/71 (81%), Positives = 69/71 (97%)
 Frame = -2

Query: 492 KPPKKPLTEKEVDELCEDWVPESLIPPITEEVKFEPSVLESAAGPHTIVNGKDVVNFASA 313
           KPPK+PLT+KE+DELCE+WVPESLIPP+TEE++FEP VLESAAGPHT++NGK+VVNF SA
Sbjct: 58  KPPKRPLTKKEIDELCEEWVPESLIPPLTEEMQFEPPVLESAAGPHTVINGKEVVNFTSA 117

Query: 312 NYLGLVGHEKL 280
           NYLGL+GHEKL
Sbjct: 118 NYLGLIGHEKL 128



 Score =  129 bits (323), Expect(2) = 3e-62
 Identities = 57/62 (91%), Positives = 61/62 (98%)
 Frame = -3

Query: 188 CTAALEKYGVGSCGPRGFYGTIDVHLDCEERVAKFIGTPDSILYSYGISTMFSAIPAFCK 9
           CTAALEKYGVGSCGPRGFYGTIDVHLDCE R+AKF+GTPDSILYSYG+STMFSAIPAFCK
Sbjct: 132 CTAALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFCK 191

Query: 8   KG 3
           +G
Sbjct: 192 RG 193


>ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vitis vinifera]
          Length = 480

 Score =  134 bits (338), Expect(2) = 3e-62
 Identities = 58/71 (81%), Positives = 69/71 (97%)
 Frame = -2

Query: 492 KPPKKPLTEKEVDELCEDWVPESLIPPITEEVKFEPSVLESAAGPHTIVNGKDVVNFASA 313
           KPPK+PLT+KE+DELCE+WVPESLIPP+TEE++FEP VLESAAGPHT++NGK+VVNF SA
Sbjct: 55  KPPKRPLTKKEIDELCEEWVPESLIPPLTEEMQFEPPVLESAAGPHTVINGKEVVNFTSA 114

Query: 312 NYLGLVGHEKL 280
           NYLGL+GHEKL
Sbjct: 115 NYLGLIGHEKL 125



 Score =  129 bits (323), Expect(2) = 3e-62
 Identities = 57/62 (91%), Positives = 61/62 (98%)
 Frame = -3

Query: 188 CTAALEKYGVGSCGPRGFYGTIDVHLDCEERVAKFIGTPDSILYSYGISTMFSAIPAFCK 9
           CTAALEKYGVGSCGPRGFYGTIDVHLDCE R+AKF+GTPDSILYSYG+STMFSAIPAFCK
Sbjct: 129 CTAALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFCK 188

Query: 8   KG 3
           +G
Sbjct: 189 RG 190


>ref|XP_002518026.1| serine palmitoyltransferase I, putative [Ricinus communis]
           gi|223543008|gb|EEF44544.1| serine palmitoyltransferase
           I, putative [Ricinus communis]
          Length = 482

 Score =  129 bits (325), Expect(2) = 3e-60
 Identities = 56/71 (78%), Positives = 67/71 (94%)
 Frame = -2

Query: 492 KPPKKPLTEKEVDELCEDWVPESLIPPITEEVKFEPSVLESAAGPHTIVNGKDVVNFASA 313
           KPPK+PLT KE+DELCEDWVPE LIPPIT+E+++EP+VLESAAGPH I+N K+VVNFASA
Sbjct: 59  KPPKRPLTNKEIDELCEDWVPEPLIPPITQEMQYEPAVLESAAGPHAIINSKEVVNFASA 118

Query: 312 NYLGLVGHEKL 280
           NYLGL+GH+KL
Sbjct: 119 NYLGLIGHDKL 129



 Score =  127 bits (319), Expect(2) = 3e-60
 Identities = 56/62 (90%), Positives = 60/62 (96%)
 Frame = -3

Query: 188 CTAALEKYGVGSCGPRGFYGTIDVHLDCEERVAKFIGTPDSILYSYGISTMFSAIPAFCK 9
           CT+ALEKYGVGSCGPRGFYGTIDVHLDCE R+AKF+GTPDSILYSYG+STMFSAIP FCK
Sbjct: 133 CTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCK 192

Query: 8   KG 3
           KG
Sbjct: 193 KG 194


>ref|XP_002867012.1| ATLCB1 [Arabidopsis lyrata subsp. lyrata]
           gi|297312848|gb|EFH43271.1| ATLCB1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 482

 Score =  132 bits (331), Expect(2) = 4e-60
 Identities = 59/71 (83%), Positives = 67/71 (94%)
 Frame = -2

Query: 492 KPPKKPLTEKEVDELCEDWVPESLIPPITEEVKFEPSVLESAAGPHTIVNGKDVVNFASA 313
           KPPK+PLTE+E+DELC++WVPE LIPPITE++K EP VLESAAGPHT VNGKDVVNFASA
Sbjct: 58  KPPKRPLTEQEIDELCDEWVPEPLIPPITEDMKHEPPVLESAAGPHTTVNGKDVVNFASA 117

Query: 312 NYLGLVGHEKL 280
           NYLGL+GHEKL
Sbjct: 118 NYLGLIGHEKL 128



 Score =  124 bits (312), Expect(2) = 4e-60
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = -3

Query: 188 CTAALEKYGVGSCGPRGFYGTIDVHLDCEERVAKFIGTPDSILYSYGISTMFSAIPAFCK 9
           CT+ALEKYGVGSCGPRGFYGTIDVHLDCE R++KF+GTPDSILYSYG+STMFS IP FCK
Sbjct: 132 CTSALEKYGVGSCGPRGFYGTIDVHLDCETRISKFLGTPDSILYSYGLSTMFSTIPCFCK 191

Query: 8   KG 3
           KG
Sbjct: 192 KG 193


>dbj|BAH20117.1| AT4G36480 [Arabidopsis thaliana]
          Length = 482

 Score =  132 bits (331), Expect(2) = 4e-60
 Identities = 59/71 (83%), Positives = 67/71 (94%)
 Frame = -2

Query: 492 KPPKKPLTEKEVDELCEDWVPESLIPPITEEVKFEPSVLESAAGPHTIVNGKDVVNFASA 313
           KPPK+PLTE+E+DELC++WVPE LIPPITE++K EP VLESAAGPHT VNGKDVVNFASA
Sbjct: 58  KPPKRPLTEQEIDELCDEWVPEPLIPPITEDMKHEPPVLESAAGPHTTVNGKDVVNFASA 117

Query: 312 NYLGLVGHEKL 280
           NYLGL+GHEKL
Sbjct: 118 NYLGLIGHEKL 128



 Score =  124 bits (312), Expect(2) = 4e-60
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = -3

Query: 188 CTAALEKYGVGSCGPRGFYGTIDVHLDCEERVAKFIGTPDSILYSYGISTMFSAIPAFCK 9
           CT+ALEKYGVGSCGPRGFYGTIDVHLDCE R++KF+GTPDSILYSYG+STMFS IP FCK
Sbjct: 132 CTSALEKYGVGSCGPRGFYGTIDVHLDCETRISKFLGTPDSILYSYGLSTMFSTIPCFCK 191

Query: 8   KG 3
           KG
Sbjct: 192 KG 193


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