BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002269
         (3247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1179   0.0  
ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1179   0.0  
ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1161   0.0  
ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helica...  1159   0.0  
ref|NP_173516.1| DEAD-box ATP-dependent RNA helicase 42 [Arabido...  1154   0.0  

>ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
            [Cucumis sativus]
          Length = 1040

 Score = 1179 bits (3049), Expect = 0.0
 Identities = 631/902 (69%), Positives = 694/902 (76%), Gaps = 25/902 (2%)
 Frame = +1

Query: 328  RRLKVQEWQKMRRKEGEA-------AVSDEPKSGKAWTLEGESDDE-DLAPIEKTDCVDS 483
            RR +VQEWQK RR + EA         +DEPKSGK WTLEGESDDE + A   +TD +D 
Sbjct: 142  RRRRVQEWQKSRRLKEEADGDKQGELNADEPKSGKTWTLEGESDDEYENARPTETD-MDV 200

Query: 484  DEDAKIPTANGPDAMMVDSNETSEL-----ETHNGG--IQDDIDPLDAFMNSMVIPEVEK 642
            DE++K P  +G + + V+ N  +E      +   GG    D+IDPLDAFMNSMV+PEVEK
Sbjct: 201  DENSK-PLVDG-EQIAVNFNNGNEAAASPPQDSIGGDAADDEIDPLDAFMNSMVLPEVEK 258

Query: 643  LITTE-PTAGXXXXXXXXXXXX--GQASGKQSTRGNKKSMGRIMPXXXXXXXXXXXXXXX 813
            L   E PT                 Q+ GK   R + KSMGRI+P               
Sbjct: 259  LNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRRISNKSMGRIIPGEDSDTDYGDLENDG 318

Query: 814  XXXXXXXXXXFMKRVKKTKVEKLSLVDHSKIQYTPFRKNFYIEVKEITRMTAEEVATYRK 993
                      FMKRVKKTK EKLS+VDHSK+ Y PFRKNFYIEVKEI+RMT EEVA YRK
Sbjct: 319  DTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEEVAAYRK 378

Query: 994  QLELKLHGKDVPKPIKTWMQTGLTTKVLDVIKKLGYERPMSIQAQALPIIMSGRDCIGVA 1173
            QLELK+HGKDVPKP+KTW QTGLT+K+L+ IKKL YE+PM IQAQALPI+MSGRDCIG+A
Sbjct: 379  QLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGRDCIGIA 438

Query: 1174 KTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKVMGVTC 1353
            KTGSGKTLAFVLPMLRHIKDQ PVV GDGPIGLIMAPTRELVQQIHSDIKKF+KVMG+ C
Sbjct: 439  KTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVMGLRC 498

Query: 1354 VPVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD 1533
            VPVYGGSGVAQQIS+LKRG EIVVCTPGRMIDILCTS+GKITNLRRVTYLVMDEADRMFD
Sbjct: 499  VPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMDEADRMFD 558

Query: 1534 MGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLTKPVEIQVGGRSVVNKDITQL 1713
            MGFEPQITRIVQNIRPDRQTVLFSATFPRQVE LARKVL KPVE+QVGGRSVVNKDI QL
Sbjct: 559  MGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEVQVGGRSVVNKDIAQL 618

Query: 1714 VELRPESDRFKRILELLGERPEKGKVLIFVQSQEKCDALFRDLLKCGHACLSLHGAKDQT 1893
            VE+RPE++RF R+LELLGE  EKGK+LIFV SQEKCDALFRDLLK G+ CLSLHGAKDQT
Sbjct: 619  VEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQT 678

Query: 1894 DRESTISDFKSNVCDLLVATSIAARGLDVKDLELVVNFDVPNHYEDYVHRVGRTGRAGRK 2073
            DRESTISDFKSNVC+LL+ATSIAARGLDVK+LELV+NFDVPNHYEDYVHRVGRTGRAGRK
Sbjct: 679  DRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRK 738

Query: 2074 GCAITFLSEEDARYAPDLVKALELSEQAVPADLKALADGFMAKVSQGLEQAHGTGYGGSG 2253
            GCAITF++EED+RYAPDLVKALELSEQ VP DL+ALAD FMAKV+QGLEQAHGTGYGGSG
Sbjct: 739  GCAITFIAEEDSRYAPDLVKALELSEQVVPDDLRALADSFMAKVNQGLEQAHGTGYGGSG 798

Query: 2254 FKFNEEEDDVRKAAKKAQAREYGFEEXXXXXXXXXXGIRKAGGDLSXXXXXXXXXXXXXX 2433
            FKFNEEED+VR+AAKKAQA+EYGFEE          G+RKAGGD+S              
Sbjct: 799  FKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQIAAIAAA 858

Query: 2434 TK---AGISGPSS-APLLQNXXXXXXXXXXXXXXXXXAATVLPGVTLP---NEXXXXXXX 2592
            TK     I+ PSS A LL N                    V+P  TLP   N+       
Sbjct: 859  TKVSAVSITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMPVIPSATLPTVTNDGAAARAA 918

Query: 2593 XXXXMNLQHNLAKIQADAMPEHYEAEFEINDFPQNARWKVTHKETLGPISEWTGAAITTR 2772
                MNLQHNLAKIQA A+PEHYEAE EINDFPQNARWKVTHKETLGPISEWTGAAITTR
Sbjct: 919  LAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTR 978

Query: 2773 GQYYPPGKILGPGERKLYLFIEGPTESSXXXXXXXXXXXLEDITKQGLSLPGASQPSKYS 2952
            GQ++PPGKI GPGERKLYLFIEGPTE S           LEDIT Q LSLPG SQP +YS
Sbjct: 979  GQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGGSQPGRYS 1038

Query: 2953 VL 2958
            V+
Sbjct: 1039 VV 1040


>ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
            [Cucumis sativus]
          Length = 1118

 Score = 1179 bits (3049), Expect = 0.0
 Identities = 631/902 (69%), Positives = 694/902 (76%), Gaps = 25/902 (2%)
 Frame = +1

Query: 328  RRLKVQEWQKMRRKEGEA-------AVSDEPKSGKAWTLEGESDDE-DLAPIEKTDCVDS 483
            RR +VQEWQK RR + EA         +DEPKSGK WTLEGESDDE + A   +TD +D 
Sbjct: 220  RRRRVQEWQKSRRLKEEADGDKQGELNADEPKSGKTWTLEGESDDEYENARPTETD-MDV 278

Query: 484  DEDAKIPTANGPDAMMVDSNETSEL-----ETHNGG--IQDDIDPLDAFMNSMVIPEVEK 642
            DE++K P  +G + + V+ N  +E      +   GG    D+IDPLDAFMNSMV+PEVEK
Sbjct: 279  DENSK-PLVDG-EQIAVNFNNGNEAAASPPQDSIGGDAADDEIDPLDAFMNSMVLPEVEK 336

Query: 643  LITTE-PTAGXXXXXXXXXXXX--GQASGKQSTRGNKKSMGRIMPXXXXXXXXXXXXXXX 813
            L   E PT                 Q+ GK   R + KSMGRI+P               
Sbjct: 337  LNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRRISNKSMGRIIPGEDSDTDYGDLENDG 396

Query: 814  XXXXXXXXXXFMKRVKKTKVEKLSLVDHSKIQYTPFRKNFYIEVKEITRMTAEEVATYRK 993
                      FMKRVKKTK EKLS+VDHSK+ Y PFRKNFYIEVKEI+RMT EEVA YRK
Sbjct: 397  DTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEEVAAYRK 456

Query: 994  QLELKLHGKDVPKPIKTWMQTGLTTKVLDVIKKLGYERPMSIQAQALPIIMSGRDCIGVA 1173
            QLELK+HGKDVPKP+KTW QTGLT+K+L+ IKKL YE+PM IQAQALPI+MSGRDCIG+A
Sbjct: 457  QLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGRDCIGIA 516

Query: 1174 KTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKVMGVTC 1353
            KTGSGKTLAFVLPMLRHIKDQ PVV GDGPIGLIMAPTRELVQQIHSDIKKF+KVMG+ C
Sbjct: 517  KTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVMGLRC 576

Query: 1354 VPVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD 1533
            VPVYGGSGVAQQIS+LKRG EIVVCTPGRMIDILCTS+GKITNLRRVTYLVMDEADRMFD
Sbjct: 577  VPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMDEADRMFD 636

Query: 1534 MGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLTKPVEIQVGGRSVVNKDITQL 1713
            MGFEPQITRIVQNIRPDRQTVLFSATFPRQVE LARKVL KPVE+QVGGRSVVNKDI QL
Sbjct: 637  MGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEVQVGGRSVVNKDIAQL 696

Query: 1714 VELRPESDRFKRILELLGERPEKGKVLIFVQSQEKCDALFRDLLKCGHACLSLHGAKDQT 1893
            VE+RPE++RF R+LELLGE  EKGK+LIFV SQEKCDALFRDLLK G+ CLSLHGAKDQT
Sbjct: 697  VEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQT 756

Query: 1894 DRESTISDFKSNVCDLLVATSIAARGLDVKDLELVVNFDVPNHYEDYVHRVGRTGRAGRK 2073
            DRESTISDFKSNVC+LL+ATSIAARGLDVK+LELV+NFDVPNHYEDYVHRVGRTGRAGRK
Sbjct: 757  DRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRK 816

Query: 2074 GCAITFLSEEDARYAPDLVKALELSEQAVPADLKALADGFMAKVSQGLEQAHGTGYGGSG 2253
            GCAITF++EED+RYAPDLVKALELSEQ VP DL+ALAD FMAKV+QGLEQAHGTGYGGSG
Sbjct: 817  GCAITFIAEEDSRYAPDLVKALELSEQVVPDDLRALADSFMAKVNQGLEQAHGTGYGGSG 876

Query: 2254 FKFNEEEDDVRKAAKKAQAREYGFEEXXXXXXXXXXGIRKAGGDLSXXXXXXXXXXXXXX 2433
            FKFNEEED+VR+AAKKAQA+EYGFEE          G+RKAGGD+S              
Sbjct: 877  FKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQIAAIAAA 936

Query: 2434 TK---AGISGPSS-APLLQNXXXXXXXXXXXXXXXXXAATVLPGVTLP---NEXXXXXXX 2592
            TK     I+ PSS A LL N                    V+P  TLP   N+       
Sbjct: 937  TKVSAVSITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMPVIPSATLPTVTNDGAAARAA 996

Query: 2593 XXXXMNLQHNLAKIQADAMPEHYEAEFEINDFPQNARWKVTHKETLGPISEWTGAAITTR 2772
                MNLQHNLAKIQA A+PEHYEAE EINDFPQNARWKVTHKETLGPISEWTGAAITTR
Sbjct: 997  LAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTR 1056

Query: 2773 GQYYPPGKILGPGERKLYLFIEGPTESSXXXXXXXXXXXLEDITKQGLSLPGASQPSKYS 2952
            GQ++PPGKI GPGERKLYLFIEGPTE S           LEDIT Q LSLPG SQP +YS
Sbjct: 1057 GQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGGSQPGRYS 1116

Query: 2953 VL 2958
            V+
Sbjct: 1117 VV 1118


>ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine max]
          Length = 1104

 Score = 1161 bits (3004), Expect = 0.0
 Identities = 613/893 (68%), Positives = 682/893 (76%), Gaps = 16/893 (1%)
 Frame = +1

Query: 328  RRLKVQEWQKMRRKEGEA-------AVSDEPKSGKAWTLEGESDDEDLAPIEKTDCVDSD 486
            RR +VQEWQ++RRK+ EA       A ++EP+SGK WTLEGESDDE+     K   +D D
Sbjct: 234  RRRRVQEWQELRRKKEEAEREKQGEASANEPESGKTWTLEGESDDEEGLGTGKQTGMDVD 293

Query: 487  EDAKIPTANGPDAMMVDSNE---TSELETHNGGIQDD--IDPLDAFMNSMVIPEVEKL-- 645
            ED K       D M+VD++     S+L+    G  +D  IDPLDAFMNSMV+PEVEKL  
Sbjct: 294  EDDKPADEEPKDVMVVDTDNGTIASDLQDGTAGAPEDEEIDPLDAFMNSMVLPEVEKLNN 353

Query: 646  ITTEPTAGXXXXXXXXXXXXGQASGKQSTRGNKKSMGRIMPXXXXXXXXXXXXXXXXXXX 825
              T   +             GQ  G QS +G+ KS+GRI+P                   
Sbjct: 354  AVTSSLSDKAIDVKPKDKGNGQNRGAQSRKGSNKSIGRIIPGEESDSDYADDEVEKDPLD 413

Query: 826  XXXXXXFMKRVKKTKVEKLSLVDHSKIQYTPFRKNFYIEVKEITRMTAEEVATYRKQLEL 1005
                  FMKRVKKTK EKLSLVDHSKI Y PF+KNFYIEVKEI++MT EE A YRKQLEL
Sbjct: 414  EDDDE-FMKRVKKTKAEKLSLVDHSKIDYEPFKKNFYIEVKEISKMTPEEAAVYRKQLEL 472

Query: 1006 KLHGKDVPKPIKTWMQTGLTTKVLDVIKKLGYERPMSIQAQALPIIMSGRDCIGVAKTGS 1185
            K+HGKDVPKPIK+W QTGL +K+L+ IKK+ +E PM IQAQALP+IMSGRDCIG+AKTGS
Sbjct: 473  KIHGKDVPKPIKSWHQTGLPSKILETIKKMNFEMPMPIQAQALPVIMSGRDCIGIAKTGS 532

Query: 1186 GKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKVMGVTCVPVY 1365
            GKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKV+G+ CVPVY
Sbjct: 533  GKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKVLGLRCVPVY 592

Query: 1366 GGSGVAQQISDLKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 1545
            GGSGVAQQIS+LKRG EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE
Sbjct: 593  GGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 652

Query: 1546 PQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLTKPVEIQVGGRSVVNKDITQLVELR 1725
            PQITRIVQNIRPDRQTVLFSATFPRQVE LARKVL KPVEIQVGGRSVVNKDITQLVE+R
Sbjct: 653  PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVR 712

Query: 1726 PESDRFKRILELLGERPEKGKVLIFVQSQEKCDALFRDLLKCGHACLSLHGAKDQTDRES 1905
            P+++RF R+LE+LGE  EKGK+LIFV SQEKCD+LF+DLL+ G+ CLSLHGAKDQTDRES
Sbjct: 713  PDNERFLRLLEILGEWYEKGKILIFVHSQEKCDSLFKDLLRHGYPCLSLHGAKDQTDRES 772

Query: 1906 TISDFKSNVCDLLVATSIAARGLDVKDLELVVNFDVPNHYEDYVHRVGRTGRAGRKGCAI 2085
            TISDFKSNVC+LLVATSIAARGLDVK+LELV+NFDVPNHYEDYVHRVGRTGRAGRKGCAI
Sbjct: 773  TISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAI 832

Query: 2086 TFLSEEDARYAPDLVKALELSEQAVPADLKALADGFMAKVSQGLEQAHGTGYGGSGFKFN 2265
            TF+SEE+ARYAPDL+KALELSEQ VP DLKALA  FMAKV+QGLEQAHGTGYGGSGFKFN
Sbjct: 833  TFISEEEARYAPDLLKALELSEQIVPNDLKALAGSFMAKVNQGLEQAHGTGYGGSGFKFN 892

Query: 2266 EEEDDVRKAAKKAQAREYGFEEXXXXXXXXXXGIRKAGGDLSXXXXXXXXXXXXXXTKAG 2445
            EEED+VRKAAKKAQA+EYGFEE          GIRKAGGD+S                  
Sbjct: 893  EEEDEVRKAAKKAQAKEYGFEEEKSDSEDEDEGIRKAGGDISQHSAFAQIIAATKGNAPA 952

Query: 2446 ISGPSSAPLLQNXXXXXXXXXXXXXXXXXAATVLP--GVTLPNEXXXXXXXXXXXMNLQH 2619
            +  P   P LQ                     VLP  G+ LP             +NLQ 
Sbjct: 953  LPTPILLPSLQ---------------------VLPGTGLPLPANDGAARAAAIAALNLQD 991

Query: 2620 NLAKIQADAMPEHYEAEFEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYYPPGKI 2799
             L KI+++A+PEHYEAE EINDFPQNARWKVTHKETLGPISEW+GAAITTRGQ++PPGKI
Sbjct: 992  KLDKIRSEALPEHYEAELEINDFPQNARWKVTHKETLGPISEWSGAAITTRGQFFPPGKI 1051

Query: 2800 LGPGERKLYLFIEGPTESSXXXXXXXXXXXLEDITKQGLSLPGASQPSKYSVL 2958
             GPGERKLYLFIEGPTE S           LEDIT Q L LPG +QP KYSV+
Sbjct: 1052 PGPGERKLYLFIEGPTEHSVKSAKADLKRVLEDITNQALQLPGGTQPGKYSVV 1104


>ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
            vinifera]
          Length = 1147

 Score = 1159 bits (2999), Expect = 0.0
 Identities = 611/901 (67%), Positives = 676/901 (75%), Gaps = 24/901 (2%)
 Frame = +1

Query: 328  RRLKVQEWQKMRRKE--------GEAAVSDEPKSGKAWTLEGESDDEDLAPIEKTDC-VD 480
            RR +VQEWQ+++RK         GEAA +DEPKSGK WTLEGESDDED+AP   ++  ++
Sbjct: 275  RRRRVQEWQELKRKREESEREKLGEAANADEPKSGKTWTLEGESDDEDVAPTGNSETDLN 334

Query: 481  SDEDAKIPTANGPDAMMVDSNETSELETHNGGIQ-----DDIDPLDAFMNSMVIPEVEKL 645
             DEDAK       D M +DS   +   T   G +     ++IDPLDAFMNSMV+PEVEKL
Sbjct: 335  MDEDAKPTDNEVGDGMAIDSQNGTSASTLQNGDEGADGDEEIDPLDAFMNSMVLPEVEKL 394

Query: 646  --ITTEPTAGXXXXXXXXXXXXGQASGKQSTRGNKKSMGRIMPXXXXXXXXXXXXXXXXX 819
                  PT+             G     +     +                         
Sbjct: 395  NNAAVSPTSNAVVPSEDSDSDYGDLENNEDPLEEEDD----------------------- 431

Query: 820  XXXXXXXXFMKRVKKTKVEKLSLVDHSKIQYTPFRKNFYIEVKEITRMTAEEVATYRKQL 999
                    FMKRVKKTK E+LS+VDHSKI Y PFRKNFYIEVKE  RMT EE+A YRKQL
Sbjct: 432  ------DEFMKRVKKTKAERLSIVDHSKIDYKPFRKNFYIEVKESARMTPEEIAAYRKQL 485

Query: 1000 ELKLHGKDVPKPIKTWMQTGLTTKVLDVIKKLGYERPMSIQAQALPIIMSGRDCIGVAKT 1179
            ELK+HGKDVPKP+KTW QTGLTTK+LD IKKL YERPM IQAQALPIIMSGRDCIG+AKT
Sbjct: 486  ELKIHGKDVPKPVKTWHQTGLTTKILDTIKKLNYERPMPIQAQALPIIMSGRDCIGIAKT 545

Query: 1180 GSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKVMGVTCVP 1359
            GSGKTLAFVLPMLRHIKDQPPV+ GDGPIGLIMAPTRELVQQIHSDIKKFAKV+G++CVP
Sbjct: 546  GSGKTLAFVLPMLRHIKDQPPVMPGDGPIGLIMAPTRELVQQIHSDIKKFAKVVGISCVP 605

Query: 1360 VYGGSGVAQQISDLKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMG 1539
            VYGGSGVAQQIS+LKRG E+VVCTPGRMIDILCTS GKITNLRRVTYLVMDEADRMFDMG
Sbjct: 606  VYGGSGVAQQISELKRGAEVVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMG 665

Query: 1540 FEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLTKPVEIQVGGRSVVNKDITQLVE 1719
            FEPQITRIVQN RPDRQTVLFSATFPRQVE LAR+VL KPVEIQVGGRSVVNKDI+QLVE
Sbjct: 666  FEPQITRIVQNTRPDRQTVLFSATFPRQVEILARRVLNKPVEIQVGGRSVVNKDISQLVE 725

Query: 1720 LRPESDRFKRILELLGERPEKGKVLIFVQSQEKCDALFRDLLKCGHACLSLHGAKDQTDR 1899
            +RPES+RF R+LELLGE  EKGK+LIFV SQEKCD+LFRDLLK G+ CLSLHGAKDQTDR
Sbjct: 726  VRPESERFFRLLELLGEWYEKGKILIFVHSQEKCDSLFRDLLKHGYPCLSLHGAKDQTDR 785

Query: 1900 ESTISDFKSNVCDLLVATSIAARGLDVKDLELVVNFDVPNHYEDYVHRVGRTGRAGRKGC 2079
            ESTISDFKSNVC+LL+ATS+AARGLDVK+LELV+NFDVPNHYEDYVHRVGRTGRAGRKG 
Sbjct: 786  ESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGS 845

Query: 2080 AITFLSEEDARYAPDLVKALELSEQAVPADLKALADGFMAKVSQGLEQAHGTGYGGSGFK 2259
            AITF+S++DARYAPDLVKALELSEQ VP DLKALADGFMAKV+QGLEQAHGTGYGGSGFK
Sbjct: 846  AITFISDDDARYAPDLVKALELSEQVVPDDLKALADGFMAKVNQGLEQAHGTGYGGSGFK 905

Query: 2260 FNEEEDDVRKAAKKAQAREYGFEEXXXXXXXXXXGIRKAGGDLSXXXXXXXXXXXXXXTK 2439
            FNEEED+VR+AAKKAQA+EYGFEE          G+RKAGGD+S              +K
Sbjct: 906  FNEEEDEVRRAAKKAQAKEYGFEEDKSDSDDEDEGVRKAGGDISQQAALAQIAAIAAASK 965

Query: 2440 AG-ISGPSSAPLLQ----NXXXXXXXXXXXXXXXXXAATVLPGVTL---PNEXXXXXXXX 2595
             G +S PS+ P  Q                       A  +PG  L   PN+        
Sbjct: 966  VGAVSMPSTVPAAQLLPNGGLPVSLSGVLGLTIPGSVAAAVPGSVLPMTPNDGAARAAAL 1025

Query: 2596 XXXMNLQHNLAKIQADAMPEHYEAEFEINDFPQNARWKVTHKETLGPISEWTGAAITTRG 2775
               +NLQHNLAKIQADAMPEHYEAE EINDFPQNARW+VTHK+TL PISEWTGAAITTRG
Sbjct: 1026 AAAINLQHNLAKIQADAMPEHYEAELEINDFPQNARWRVTHKDTLIPISEWTGAAITTRG 1085

Query: 2776 QYYPPGKILGPGERKLYLFIEGPTESSXXXXXXXXXXXLEDITKQGLSLPGASQPSKYSV 2955
            QYY  GK+ GPGERKLYLFIEGPTE S           LED T Q +S P A QP KYSV
Sbjct: 1086 QYYTTGKVPGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDFTIQAISNPSAVQPGKYSV 1145

Query: 2956 L 2958
            +
Sbjct: 1146 V 1146


>ref|NP_173516.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
            gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName:
            Full=DEAD-box ATP-dependent RNA helicase 42
            gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA
            helicases [Arabidopsis thaliana]
            gi|332191919|gb|AEE30040.1| DEAD-box ATP-dependent RNA
            helicase 42 [Arabidopsis thaliana]
          Length = 1166

 Score = 1154 bits (2985), Expect = 0.0
 Identities = 609/899 (67%), Positives = 687/899 (76%), Gaps = 22/899 (2%)
 Frame = +1

Query: 328  RRLKVQEWQKMRRKEGEA-------AVSDEPKSGKAWTLEGESDDEDLAPIEKTDC-VDS 483
            RR +VQEWQ+++RK+ EA       A  +EPK+GKAWTLEGESDDE+  P EK++  +D 
Sbjct: 282  RRRRVQEWQELKRKKEEAESESKGDADGNEPKAGKAWTLEGESDDEEGHPEEKSETEMDV 341

Query: 484  DEDAKIPTANGPDAMMVD-SNETSELETHNGGI----QDDIDPLDAFMNSMVIPEVEKLI 648
            DE+ K    N  DA MVD  NET+   + +GG     +++IDPLDAFMN+MV+PEVEK  
Sbjct: 342  DEETK--PENDGDAKMVDLENETAATVSESGGDGAVDEEEIDPLDAFMNTMVLPEVEKFC 399

Query: 649  TTEPTAGXXXXXXXXXXXXGQASGKQSTRGNKKSMGRIMPXXXXXXXXXXXXXXXXXXXX 828
               P               G+ SG +  +G  K++GRI+                     
Sbjct: 400  NGAPPPAVNDGTLDSKMN-GKESGDRPKKGFNKALGRIIQGEDSDSDYSEPKNDDDPSLD 458

Query: 829  XXXXXFMKRVKKTKVEKLSLVDHSKIQYTPFRKNFYIEVKEITRMTAEEVATYRKQLELK 1008
                 FMKRVKKTK EKLSLVDHSKI+Y PFRKNFYIEVK+I+RMT EEV TYRK+LELK
Sbjct: 459  EDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELK 518

Query: 1009 LHGKDVPKPIKTWMQTGLTTKVLDVIKKLGYERPMSIQAQALPIIMSGRDCIGVAKTGSG 1188
            +HGKDVP+PIK W QTGLT+K+LD +KKL YE+PM IQ QALPIIMSGRDCIGVAKTGSG
Sbjct: 519  VHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSG 578

Query: 1189 KTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKVMGVTCVPVYG 1368
            KTL FVLPMLRHIKDQPPV AGDGPIGL+MAPTRELVQQIHSDI+KF+K +G+ CVPVYG
Sbjct: 579  KTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYG 638

Query: 1369 GSGVAQQISDLKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEP 1548
            GSGVAQQIS+LKRGTEIVVCTPGRMIDILCTSSGKITNLRRVT+LVMDEADRMFDMGFEP
Sbjct: 639  GSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEP 698

Query: 1549 QITRIVQNIRPDRQTVLFSATFPRQVETLARKVLTKPVEIQVGGRSVVNKDITQLVELRP 1728
            QITRI+QNIRP+RQTVLFSATFPRQVETLARKVL KPVEIQVGGRSVVNKDITQLVE+RP
Sbjct: 699  QITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRP 758

Query: 1729 ESDRFKRILELLGERPEKGKVLIFVQSQEKCDALFRDLLKCGHACLSLHGAKDQTDREST 1908
            ESDRF R+LELLGE  EKGK+L+FVQSQEKCDAL+RD++K  + CLSLHG KDQTDREST
Sbjct: 759  ESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDREST 818

Query: 1909 ISDFKSNVCDLLVATSIAARGLDVKDLELVVNFDVPNHYEDYVHRVGRTGRAGRKGCAIT 2088
            ISDFK++VC+LL+ATS+AARGLDVK+LELVVNFD PNHYEDYVHRVGRTGRAGRKGCA+T
Sbjct: 819  ISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVT 878

Query: 2089 FLSEEDARYAPDLVKALELSEQAVPADLKALADGFMAKVSQGLEQAHGTGYGGSGFKFNE 2268
            F+SE+DA+YAPDLVKALELSEQ VP DLKALADGFM KV QG+EQAHGTGYGGSGFKFNE
Sbjct: 879  FISEDDAKYAPDLVKALELSEQPVPDDLKALADGFMVKVKQGIEQAHGTGYGGSGFKFNE 938

Query: 2269 EEDDVRKAAKKAQAREYGFEEXXXXXXXXXXGIRKAGGD--LSXXXXXXXXXXXXXXTKA 2442
            EE++VRKAAKKAQA+EYGFEE           +RKAGG                    KA
Sbjct: 939  EEEEVRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQQQATFAQIAAIAAAAKA 998

Query: 2443 GISGPSSAPLLQNXXXXXXXXXXXXXXXXXAATVLPGV------TLPNEXXXXXXXXXXX 2604
              + P SAP+  N                     +PGV      TLP+E           
Sbjct: 999  AAAAPVSAPVTAN----------QLLANGGGLAAMPGVLPVTVPTLPSEGAGRAAAMVAA 1048

Query: 2605 MNLQHNLAKIQADAMPEHYEAEFEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYY 2784
            MNLQHNLAKIQADAMPEHYEAE EINDFPQNARWKVTHKETLGPISEWTGAAITTRGQ+Y
Sbjct: 1049 MNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQFY 1108

Query: 2785 PPGKILGPGERKLYLFIEGPTESSXXXXXXXXXXXLEDITKQGL-SLPGASQPSKYSVL 2958
            P G+I GPGERKLYLFIEGP+E S           LEDIT Q + SLPG +   +YSVL
Sbjct: 1109 PTGRIPGPGERKLYLFIEGPSEKSVKHAKAELKRVLEDITNQAMSSLPGGAS-GRYSVL 1166