BLASTX nr result

ID: Coptis24_contig00002260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002260
         (1307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187413.1| uncharacterized protein [Arabidopsis thaliana] ...   279   1e-72
ref|XP_002882536.1| hypothetical protein ARALYDRAFT_478080 [Arab...   277   5e-72
ref|XP_002272798.1| PREDICTED: uncharacterized protein LOC100257...   276   1e-71
ref|NP_001189835.1| uncharacterized protein [Arabidopsis thalian...   275   1e-71
ref|NP_001030658.1| uncharacterized protein [Arabidopsis thalian...   275   2e-71

>ref|NP_187413.1| uncharacterized protein [Arabidopsis thaliana]
           gi|27754217|gb|AAO22562.1| unknown protein [Arabidopsis
           thaliana] gi|332641041|gb|AEE74562.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 258

 Score =  279 bits (714), Expect = 1e-72
 Identities = 135/209 (64%), Positives = 171/209 (81%), Gaps = 1/209 (0%)
 Frame = +3

Query: 282 ALKHSPEPGLSSKWTSEEQTILDEGLIKYASEIPMARYTMIAASLHDKTVRDVALRCRWM 461
           AL+H+P  G+S+ WT EEQ++L++ L+KYA+E  + RY  IA  + DKTVRDVALRCRWM
Sbjct: 55  ALRHNP--GISTDWTLEEQSLLEDLLVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWM 112

Query: 462 TKKESGKRRKED-MSRKSKDKKERTTDPSVKSSAHLAIRPSVPPYAPPMIPVDNDDGISY 638
           TKKE+GKRRKED  SRKSKDKKE+ TD S KSS+HL + P+ P YAPPM+P+D DDGISY
Sbjct: 113 TKKENGKRRKEDHSSRKSKDKKEKATDSSAKSSSHLNVHPNGPSYAPPMMPIDTDDGISY 172

Query: 639 QAIGGPTGHLLEQNAQVFEQISANFASLQIHDVHKNINLFCQTRDNILTIMNDLNDMPGI 818
           +AIGG +G LLEQNAQ+F Q+S NF++ Q+H+   N+N+ C+ RDNIL I+NDLNDMP +
Sbjct: 173 KAIGGVSGDLLEQNAQMFNQLSTNFSAFQLHE---NVNILCKARDNILAILNDLNDMPEV 229

Query: 819 MKQMPPLPVKVNEELANTILPRPTRPMQS 905
           MKQMPPLPVK+NEELAN+ILPRP+   +S
Sbjct: 230 MKQMPPLPVKLNEELANSILPRPSHQRKS 258


>ref|XP_002882536.1| hypothetical protein ARALYDRAFT_478080 [Arabidopsis lyrata subsp.
           lyrata] gi|297328376|gb|EFH58795.1| hypothetical protein
           ARALYDRAFT_478080 [Arabidopsis lyrata subsp. lyrata]
          Length = 251

 Score =  277 bits (708), Expect = 5e-72
 Identities = 136/210 (64%), Positives = 172/210 (81%), Gaps = 2/210 (0%)
 Frame = +3

Query: 282 ALKHSPEPGLSSKWTSEEQTILDEGLIKYASEIPMARYTMIAASLHDKTVRDVALRCRWM 461
           AL+H+P  G+S+ WT EEQ++L++ L+KYA+E  + RY  IA  + DKTVRDVALRCRWM
Sbjct: 47  ALRHNP--GISTDWTHEEQSLLEDLLVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWM 104

Query: 462 TKKESGKRRKED-MSRKSKDKK-ERTTDPSVKSSAHLAIRPSVPPYAPPMIPVDNDDGIS 635
           TKKE+GKRRKED  SRKSKDKK E+ TD S KSS+HL + P+ P YAPPM+P+D DDGIS
Sbjct: 105 TKKENGKRRKEDHSSRKSKDKKQEKATDSSAKSSSHLNVHPNGPSYAPPMMPIDTDDGIS 164

Query: 636 YQAIGGPTGHLLEQNAQVFEQISANFASLQIHDVHKNINLFCQTRDNILTIMNDLNDMPG 815
           Y+AIGG +G LLEQNAQ+F Q+S+NF++ Q+H+   N+N+ C+ RDNIL I+NDLNDMP 
Sbjct: 165 YKAIGGVSGDLLEQNAQMFNQVSSNFSAFQLHE---NVNILCKARDNILAILNDLNDMPE 221

Query: 816 IMKQMPPLPVKVNEELANTILPRPTRPMQS 905
           +MKQMPPLPVKVNEELAN+ILPRP+   +S
Sbjct: 222 VMKQMPPLPVKVNEELANSILPRPSHQRKS 251


>ref|XP_002272798.1| PREDICTED: uncharacterized protein LOC100257710 [Vitis vinifera]
          Length = 254

 Score =  276 bits (705), Expect = 1e-71
 Identities = 140/207 (67%), Positives = 166/207 (80%), Gaps = 2/207 (0%)
 Frame = +3

Query: 282 ALKHSPEPGLSSKWTSEEQTILDEGLIKYASEIPMARYTMIAASLHDKTVRDVALRCRWM 461
           A+KH+P  G++  WT EEQ++L+EGL  Y+S+  + RY  IA  L +KTVRDVALRCRWM
Sbjct: 48  AMKHNP--GIAMDWTPEEQSVLEEGLNAYSSDSNIIRYAKIAMQLQNKTVRDVALRCRWM 105

Query: 462 TKKESGKRRKED--MSRKSKDKKERTTDPSVKSSAHLAIRPSVPPYAPPMIPVDNDDGIS 635
           +KKE+ KRRKED  +SRKSKDKKE+ T+PS KSS HLA R +VPPYA PMIP+DNDDGIS
Sbjct: 106 SKKENSKRRKEDHNLSRKSKDKKEKVTEPSAKSS-HLASRTNVPPYAMPMIPMDNDDGIS 164

Query: 636 YQAIGGPTGHLLEQNAQVFEQISANFASLQIHDVHKNINLFCQTRDNILTIMNDLNDMPG 815
           Y+AIGG TG LLEQNAQ F QISAN ASLQI D   NI+LFCQ RDNI  I+NDLNDMP 
Sbjct: 165 YKAIGGSTGQLLEQNAQAFNQISANLASLQIQD---NISLFCQARDNIQAILNDLNDMPE 221

Query: 816 IMKQMPPLPVKVNEELANTILPRPTRP 896
           +M+QMPPLPVK+NE+L N+ILPR   P
Sbjct: 222 VMRQMPPLPVKINEDLVNSILPRAAHP 248


>ref|NP_001189835.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332641044|gb|AEE74565.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 268

 Score =  275 bits (704), Expect = 1e-71
 Identities = 136/216 (62%), Positives = 173/216 (80%), Gaps = 8/216 (3%)
 Frame = +3

Query: 282 ALKHSPEPGLSSKWTSEEQTILDEGLIKYASEIPMARYTMIAASLHDKTVRDVALRCRWM 461
           AL+H+P  G+S+ WT EEQ++L++ L+KYA+E  + RY  IA  + DKTVRDVALRCRWM
Sbjct: 55  ALRHNP--GISTDWTLEEQSLLEDLLVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWM 112

Query: 462 TKKESGKRRKED-MSRKSKDKK-ERTTDPSVKSSAHLAIRPSVPPYAPPMIPVDNDDGIS 635
           TKKE+GKRRKED  SRKSKDKK E+ TD S KSS+HL + P+ P YAPPM+P+D DDGIS
Sbjct: 113 TKKENGKRRKEDHSSRKSKDKKQEKATDSSAKSSSHLNVHPNGPSYAPPMMPIDTDDGIS 172

Query: 636 YQAIGGPTGHLLEQNAQVFEQISANFASLQI------HDVHKNINLFCQTRDNILTIMND 797
           Y+AIGG +G LLEQNAQ+F Q+S NF++ Q+      H +H+N+N+ C+ RDNIL I+ND
Sbjct: 173 YKAIGGVSGDLLEQNAQMFNQLSTNFSAFQVNSTSTFHLLHENVNILCKARDNILAILND 232

Query: 798 LNDMPGIMKQMPPLPVKVNEELANTILPRPTRPMQS 905
           LNDMP +MKQMPPLPVK+NEELAN+ILPRP+   +S
Sbjct: 233 LNDMPEVMKQMPPLPVKLNEELANSILPRPSHQRKS 268


>ref|NP_001030658.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332641043|gb|AEE74564.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 259

 Score =  275 bits (702), Expect = 2e-71
 Identities = 135/210 (64%), Positives = 171/210 (81%), Gaps = 2/210 (0%)
 Frame = +3

Query: 282 ALKHSPEPGLSSKWTSEEQTILDEGLIKYASEIPMARYTMIAASLHDKTVRDVALRCRWM 461
           AL+H+P  G+S+ WT EEQ++L++ L+KYA+E  + RY  IA  + DKTVRDVALRCRWM
Sbjct: 55  ALRHNP--GISTDWTLEEQSLLEDLLVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWM 112

Query: 462 TKKESGKRRKED-MSRKSKDKK-ERTTDPSVKSSAHLAIRPSVPPYAPPMIPVDNDDGIS 635
           TKKE+GKRRKED  SRKSKDKK E+ TD S KSS+HL + P+ P YAPPM+P+D DDGIS
Sbjct: 113 TKKENGKRRKEDHSSRKSKDKKQEKATDSSAKSSSHLNVHPNGPSYAPPMMPIDTDDGIS 172

Query: 636 YQAIGGPTGHLLEQNAQVFEQISANFASLQIHDVHKNINLFCQTRDNILTIMNDLNDMPG 815
           Y+AIGG +G LLEQNAQ+F Q+S NF++ Q+H+   N+N+ C+ RDNIL I+NDLNDMP 
Sbjct: 173 YKAIGGVSGDLLEQNAQMFNQLSTNFSAFQLHE---NVNILCKARDNILAILNDLNDMPE 229

Query: 816 IMKQMPPLPVKVNEELANTILPRPTRPMQS 905
           +MKQMPPLPVK+NEELAN+ILPRP+   +S
Sbjct: 230 VMKQMPPLPVKLNEELANSILPRPSHQRKS 259


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