BLASTX nr result

ID: Coptis24_contig00002237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002237
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528952.1| Dual specificity protein phosphatase, putati...   357   2e-96
ref|XP_002321157.1| predicted protein [Populus trichocarpa] gi|2...   352   8e-95
ref|XP_002277180.1| PREDICTED: protein-tyrosine-phosphatase IBR5...   347   2e-93
ref|XP_003519436.1| PREDICTED: protein-tyrosine-phosphatase IBR5...   342   1e-91
ref|NP_178534.2| protein-tyrosine-phosphatase IBR5 [Arabidopsis ...   338   1e-90

>ref|XP_002528952.1| Dual specificity protein phosphatase, putative [Ricinus communis]
           gi|223531598|gb|EEF33426.1| Dual specificity protein
           phosphatase, putative [Ricinus communis]
          Length = 270

 Score =  357 bits (916), Expect = 2e-96
 Identities = 179/271 (66%), Positives = 213/271 (78%), Gaps = 14/271 (5%)
 Frame = -2

Query: 988 KRERENPCGVCGHYHKYEEGEVCSICGHRAPEKSSASGGIIHMSAFPSEIFPDFLYLGSY 809
           KRERENPCGVCGHYHKYEEGEVC ICGHR PE  SA    +H+SAFPSEI P+FLYLGSY
Sbjct: 3   KRERENPCGVCGHYHKYEEGEVCGICGHRMPE--SAEKSALHVSAFPSEILPEFLYLGSY 60

Query: 808 DNASRAELLKAQGISHILNTVPACQNLYRNSFTYHCIQEENALTFDDAIQFLDQCEKDKA 629
           DNASR+ELL+ QGIS ILNTVPACQNLY+NSFTYHC+Q++ +L FDDAIQFL++CEKDKA
Sbjct: 61  DNASRSELLRTQGISCILNTVPACQNLYKNSFTYHCLQDDKSLQFDDAIQFLEKCEKDKA 120

Query: 628 RVLVHCMTGKSRSPAIVVAFLMKSRGWRLAQSYQWVKEKRPSVDLSPAVNQQLQEYEQKI 449
           RVLVHCM+GK+RSPAIV+A+LMKS+GWRLAQSYQWVKE+RP+VDL+ AV QQLQEYEQKI
Sbjct: 121 RVLVHCMSGKNRSPAIVIAYLMKSKGWRLAQSYQWVKERRPAVDLNQAVYQQLQEYEQKI 180

Query: 448 FGSAE--SCHIPVGSVSSAP-FGYGFQKADDTNPVPAFGNLTTNSIFDQAALNIPPQDFT 278
           FGSA+  +  +PV   +  P F +GF K +D  P PAF +++  SIF +  L IPP +F 
Sbjct: 181 FGSADCNNLALPVLPPAGVPSFSFGFPKVNDPVPAPAFNSISATSIFSR-PLGIPPHEFQ 239

Query: 277 FGATRYDKISN---------NPN--DAQMES 218
           FGA +    +N         NPN  D  M+S
Sbjct: 240 FGAGQPQNSANENPFVANPPNPNGGDISMDS 270


>ref|XP_002321157.1| predicted protein [Populus trichocarpa] gi|222861930|gb|EEE99472.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  352 bits (903), Expect = 8e-95
 Identities = 168/246 (68%), Positives = 202/246 (82%), Gaps = 6/246 (2%)
 Frame = -2

Query: 988 KRERENPCGVCGHYHKYEEGEVCSICGHRAPEKSSASGGIIHMSAFPSEIFPDFLYLGSY 809
           KRERENPCGVCGHYHKYEEGEVC ICGHR PE ++     +H+SAFPS+I PDFL+LGSY
Sbjct: 3   KRERENPCGVCGHYHKYEEGEVCGICGHRMPESTADKSPSVHLSAFPSQILPDFLFLGSY 62

Query: 808 DNASRAELLKAQGISHILNTVPACQNLYRNSFTYHCIQEENALTFDDAIQFLDQCEKDKA 629
           DNASR+ELLK QGI+ +LNTVPACQNLY+NSFTYHC+Q++  L FDDAIQFL+QCE+DKA
Sbjct: 63  DNASRSELLKTQGITRVLNTVPACQNLYKNSFTYHCLQDDKILQFDDAIQFLEQCERDKA 122

Query: 628 RVLVHCMTGKSRSPAIVVAFLMKSRGWRLAQSYQWVKEKRPSVDLSPAVNQQLQEYEQKI 449
           RVLVHCM+GK+RSPAIV+A+LMKSRGWRLAQ YQWVKE+RPSVDL+ AV+QQL EYEQK+
Sbjct: 123 RVLVHCMSGKNRSPAIVMAYLMKSRGWRLAQCYQWVKERRPSVDLTQAVHQQLHEYEQKL 182

Query: 448 FGSAESCH------IPVGSVSSAPFGYGFQKADDTNPVPAFGNLTTNSIFDQAALNIPPQ 287
           FGS ++ +      +PVG+ S   F +GF KA+D  PV AF  +   SIF +  L +PPQ
Sbjct: 183 FGSNDNSNPALPVFLPVGAPS---FSFGFPKANDPVPVQAFIGVGAPSIFTR-PLEVPPQ 238

Query: 286 DFTFGA 269
           +F FGA
Sbjct: 239 EFQFGA 244


>ref|XP_002277180.1| PREDICTED: protein-tyrosine-phosphatase IBR5 [Vitis vinifera]
           gi|297739238|emb|CBI28889.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  347 bits (891), Expect = 2e-93
 Identities = 171/267 (64%), Positives = 208/267 (77%), Gaps = 12/267 (4%)
 Frame = -2

Query: 988 KRERENPCGVCGHYHKYEEGEVCSICGHRAPEKSSASGGIIHMSAFPSEIFPDFLYLGSY 809
           KRERENPCGVCGHYHKYEEGEVC +CGHR P  S  +   I +SAFPSEI P+FLYLGSY
Sbjct: 3   KRERENPCGVCGHYHKYEEGEVCGVCGHRIPASSEKTS--IQVSAFPSEILPEFLYLGSY 60

Query: 808 DNASRAELLKAQGISHILNTVPACQNLYRNSFTYHCIQEENALTFDDAIQFLDQCEKDKA 629
           DNASR+ELLK QGIS +LNTVPACQNLY+NSFTY+C+ ++ +L FDDAIQFL+QCEKDKA
Sbjct: 61  DNASRSELLKTQGISRVLNTVPACQNLYKNSFTYYCLPDDKSLPFDDAIQFLEQCEKDKA 120

Query: 628 RVLVHCMTGKSRSPAIVVAFLMKSRGWRLAQSYQWVKEKRPSVDLSPAVNQQLQEYEQKI 449
           RVLVHCM+GK+RSPAIV+A+LMK +GWR AQSYQWVKE+RPSV+LS AV++QLQEYE+ I
Sbjct: 121 RVLVHCMSGKNRSPAIVIAYLMKCKGWRFAQSYQWVKERRPSVELSQAVHEQLQEYERSI 180

Query: 448 FGSAESCH--IPVGSVS-SAPFGYGFQKADDTNPVPAFGNLTTNSIFDQAALNIPPQDFT 278
           FGS ES    +P+   S +A F +GF KA+D  P PAF  +   SIF +   ++PP +F 
Sbjct: 181 FGSMESISPTMPIFQPSGAASFTFGFPKANDPLPAPAFNTIGAASIFARPPADVPPHEFK 240

Query: 277 FGATRYDK-------ISN--NPNDAQM 224
           FGA + DK       I+N  NPN + +
Sbjct: 241 FGAGQTDKNIVESPFIANPSNPNSSDI 267


>ref|XP_003519436.1| PREDICTED: protein-tyrosine-phosphatase IBR5-like [Glycine max]
          Length = 271

 Score =  342 bits (876), Expect = 1e-91
 Identities = 167/256 (65%), Positives = 203/256 (79%), Gaps = 3/256 (1%)
 Frame = -2

Query: 988 KRERENPCGVCGHYHKYEEGEVCSICGHRAPEKSSASGGIIHMSAFPSEIFPDFLYLGSY 809
           KRERENPCGVCGHYHKYEEGEVCSICGHR P  S  +   I +SAFPS + P+FLYLGSY
Sbjct: 3   KRERENPCGVCGHYHKYEEGEVCSICGHRIPVGSEKTS--IQVSAFPSVVLPEFLYLGSY 60

Query: 808 DNASRAELLKAQGISHILNTVPACQNLYRNSFTYHCIQEENALTFDDAIQFLDQCEKDKA 629
           DNASR+ELLK QGIS ILNTVP+CQNLY+NSFTYHC+ ++  L FD+AIQFL+QCEKDK 
Sbjct: 61  DNASRSELLKTQGISRILNTVPSCQNLYKNSFTYHCLPDDKTLPFDEAIQFLEQCEKDKE 120

Query: 628 RVLVHCMTGKSRSPAIVVAFLMKSRGWRLAQSYQWVKEKRPSVDLSPAVNQQLQEYEQKI 449
           RVLVHCM+GKSRSPAIV+A+LMK +GWRLAQSYQWVKE+RPSV+L+  V QQLQE+EQKI
Sbjct: 121 RVLVHCMSGKSRSPAIVIAYLMKFKGWRLAQSYQWVKERRPSVELTQGVYQQLQEFEQKI 180

Query: 448 FGSAES-CHIPVGSVSSAP-FGYGFQKADDTNPVPAFGNLTTNSIFDQAALNIPPQDFTF 275
           +G  +S   +P G + +AP   +GF K +D   +P+F    T SIF +A L+I P +FTF
Sbjct: 181 YGPIDSGSSVPPGFLPTAPSISFGFPKINDPAQLPSFSTAGTPSIFARAPLDIAPTEFTF 240

Query: 274 GATRYDK-ISNNPNDA 230
           GA +  K ++ NP +A
Sbjct: 241 GAGQTQKNVAGNPYNA 256


>ref|NP_178534.2| protein-tyrosine-phosphatase IBR5 [Arabidopsis thaliana]
           gi|75297689|sp|Q84JU4.1|IBR5_ARATH RecName:
           Full=Protein-tyrosine-phosphatase IBR5; AltName:
           Full=Protein INDOLE-3-BUTYRIC ACID RESPONSE 5;
           Short=Protein IBA RESPONSE 5; AltName:
           Full=SKP1-interacting partner 33
           gi|28393745|gb|AAO42283.1| putative protein phosphatase
           [Arabidopsis thaliana] gi|28973409|gb|AAO64029.1|
           putative protein phosphatase [Arabidopsis thaliana]
           gi|37813554|gb|AAR04550.1| dual-specificity
           phosphatase-like protein [Arabidopsis thaliana]
           gi|330250751|gb|AEC05845.1| protein-tyrosine-phosphatase
           IBR5 [Arabidopsis thaliana]
          Length = 257

 Score =  338 bits (867), Expect = 1e-90
 Identities = 162/243 (66%), Positives = 192/243 (79%), Gaps = 2/243 (0%)
 Frame = -2

Query: 988 KRERENPCGVCGHYHKYEEGEVCSICGHRAPEKS-SASGGIIHMSAFPSEIFPDFLYLGS 812
           KRERENPC +CGHYHKYEEGEVC +CGH  P  S + +   +H+SAFPSEI P+FLYLGS
Sbjct: 3   KRERENPCSICGHYHKYEEGEVCGVCGHCMPVSSDTVAPQQVHVSAFPSEILPEFLYLGS 62

Query: 811 YDNASRAELLKAQGISHILNTVPACQNLYRNSFTYHCIQEENALTFDDAIQFLDQCEKDK 632
           YDNASR+ELLK QGIS +LNTVP CQNLYRNSFTYH +  E  L FDDAI+FLDQCEKDK
Sbjct: 63  YDNASRSELLKTQGISRVLNTVPMCQNLYRNSFTYHGLDNEKVLQFDDAIKFLDQCEKDK 122

Query: 631 ARVLVHCMTGKSRSPAIVVAFLMKSRGWRLAQSYQWVKEKRPSVDLSPAVNQQLQEYEQK 452
           ARVLVHCM+GKSRSPA+VVA+LMK +GWRLA+S+QWVK++RPS D+SP   QQLQE+EQ 
Sbjct: 123 ARVLVHCMSGKSRSPAVVVAYLMKRKGWRLAESHQWVKQRRPSTDISPEFYQQLQEFEQG 182

Query: 451 IFGSAESCHIPVGSVSSAP-FGYGFQKADDTNPVPAFGNLTTNSIFDQAALNIPPQDFTF 275
           IFGS     +   +++ AP FG+GF K D+    P F N  T+SIF   A +IPPQ+FTF
Sbjct: 183 IFGSE---MMSAMNINDAPTFGFGFPKIDNQAQAPVFNNAPTSSIFSSPASSIPPQEFTF 239

Query: 274 GAT 266
           GAT
Sbjct: 240 GAT 242


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