BLASTX nr result

ID: Coptis24_contig00002231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002231
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519706.1| DNA replication licensing factor MCM3, putat...   236   1e-60
ref|XP_002305335.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-60
ref|XP_003608493.1| DNA replication licensing factor MCM3-like p...   233   1e-59
ref|XP_004134560.1| PREDICTED: DNA replication licensing factor ...   233   2e-59
gb|AAN73053.2| mini-chromosome maintenance protein MCM3 [Pisum s...   233   2e-59

>ref|XP_002519706.1| DNA replication licensing factor MCM3, putative [Ricinus communis]
           gi|223541123|gb|EEF42679.1| DNA replication licensing
           factor MCM3, putative [Ricinus communis]
          Length = 769

 Score =  236 bits (603), Expect = 1e-60
 Identities = 120/125 (96%), Positives = 125/125 (100%)
 Frame = -3

Query: 375 DDLKNIRKIAEREDAFELLGNSLAPSIYGHSWIKKAVILLMLGGMEKNLKNGTHLRGDIN 196
           +DLKNI+KIAER+DAF+LLGNSLAPSIYGHSWIKKAVILLMLGG+EKNLKNGTHLRGDIN
Sbjct: 270 EDLKNIKKIAERDDAFDLLGNSLAPSIYGHSWIKKAVILLMLGGVEKNLKNGTHLRGDIN 329

Query: 195 MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL 16
           MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL
Sbjct: 330 MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL 389

Query: 15  ADRGV 1
           ADRGV
Sbjct: 390 ADRGV 394


>ref|XP_002305335.1| predicted protein [Populus trichocarpa] gi|222848299|gb|EEE85846.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  236 bits (602), Expect = 1e-60
 Identities = 119/125 (95%), Positives = 125/125 (100%)
 Frame = -3

Query: 375 DDLKNIRKIAEREDAFELLGNSLAPSIYGHSWIKKAVILLMLGGMEKNLKNGTHLRGDIN 196
           +DLKNI+KIAER+DAF+LLGNSLAPSIYGHSWIKKAV+LLMLGG+EKNLKNGTHLRGDIN
Sbjct: 267 EDLKNIKKIAERDDAFDLLGNSLAPSIYGHSWIKKAVVLLMLGGVEKNLKNGTHLRGDIN 326

Query: 195 MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL 16
           MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL
Sbjct: 327 MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL 386

Query: 15  ADRGV 1
           ADRGV
Sbjct: 387 ADRGV 391


>ref|XP_003608493.1| DNA replication licensing factor MCM3-like protein [Medicago
           truncatula] gi|355509548|gb|AES90690.1| DNA replication
           licensing factor MCM3-like protein [Medicago truncatula]
          Length = 773

 Score =  233 bits (594), Expect = 1e-59
 Identities = 118/125 (94%), Positives = 124/125 (99%)
 Frame = -3

Query: 375 DDLKNIRKIAEREDAFELLGNSLAPSIYGHSWIKKAVILLMLGGMEKNLKNGTHLRGDIN 196
           +DLKNI+KIAER+D F+LLGNSLAPSI+GHSWIKKAVILLMLGG+EKNLKNGTHLRGDIN
Sbjct: 275 EDLKNIKKIAERDDTFDLLGNSLAPSIHGHSWIKKAVILLMLGGVEKNLKNGTHLRGDIN 334

Query: 195 MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL 16
           MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL
Sbjct: 335 MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL 394

Query: 15  ADRGV 1
           ADRGV
Sbjct: 395 ADRGV 399


>ref|XP_004134560.1| PREDICTED: DNA replication licensing factor MCM3 homolog 1-like
           [Cucumis sativus] gi|449505920|ref|XP_004162604.1|
           PREDICTED: DNA replication licensing factor MCM3 homolog
           1-like [Cucumis sativus]
          Length = 771

 Score =  233 bits (593), Expect = 2e-59
 Identities = 118/125 (94%), Positives = 123/125 (98%)
 Frame = -3

Query: 375 DDLKNIRKIAEREDAFELLGNSLAPSIYGHSWIKKAVILLMLGGMEKNLKNGTHLRGDIN 196
           +DLKNI+KIAER+D F+LLGNSLAPSIYGHSWIKKAVILLML G+EKNLKNGTHLRGDIN
Sbjct: 275 EDLKNIKKIAERDDTFDLLGNSLAPSIYGHSWIKKAVILLMLSGVEKNLKNGTHLRGDIN 334

Query: 195 MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL 16
           MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL
Sbjct: 335 MMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVL 394

Query: 15  ADRGV 1
           ADRGV
Sbjct: 395 ADRGV 399


>gb|AAN73053.2| mini-chromosome maintenance protein MCM3 [Pisum sativum]
          Length = 710

 Score =  233 bits (593), Expect = 2e-59
 Identities = 118/126 (93%), Positives = 124/126 (98%)
 Frame = -3

Query: 378 TDDLKNIRKIAEREDAFELLGNSLAPSIYGHSWIKKAVILLMLGGMEKNLKNGTHLRGDI 199
           T+DLKNI+KIAER+D F+LLGNSLAPSI+GHSWIKKAVILLML G+EKNLKNGTHLRGDI
Sbjct: 207 TEDLKNIKKIAERDDTFDLLGNSLAPSIHGHSWIKKAVILLMLSGVEKNLKNGTHLRGDI 266

Query: 198 NMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMV 19
           NMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMV
Sbjct: 267 NMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMV 326

Query: 18  LADRGV 1
           LADRGV
Sbjct: 327 LADRGV 332


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