BLASTX nr result

ID: Coptis24_contig00002195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002195
         (1584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI...   785   0.0  
ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA liga...   775   0.0  
emb|CAN64147.1| hypothetical protein VITISV_042774 [Vitis vinifera]   772   0.0  
ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus comm...   766   0.0  
ref|XP_002329170.1| acyl:coa ligase acetate-coa synthetase-like ...   761   0.0  

>ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
          Length = 549

 Score =  785 bits (2027), Expect = 0.0
 Identities = 377/533 (70%), Positives = 445/533 (83%), Gaps = 6/533 (1%)
 Frame = +2

Query: 2    TPLGFLERAATVYADSNSIIYNSTTYTWSQTYRRCLQLASSIVSLGIKPGNVVSVXXXXX 181
            TPLGFL+RAATVY D  S++YNS TYTWSQT+RRCLQ+ASSI S GI             
Sbjct: 15   TPLGFLDRAATVYGDCPSVLYNSITYTWSQTHRRCLQVASSIKSFGI------------- 61

Query: 182  XXXXXXXXXXXXXPGNVVSVIAPNIPAMYELHFAVPMSGAILNSINTRLDARTISILLRH 361
                          G+VVSV+APN+PAMYELHFAVPMSGA+LN+INTRLDART+S+LLRH
Sbjct: 62   ------------GRGHVVSVVAPNVPAMYELHFAVPMSGAVLNTINTRLDARTVSVLLRH 109

Query: 362  SEAKLVFVDHFSRSLVLEALSLFPQESQFPILAFINTDAETPAADLD----YESLIEKGD 529
            SE+KLVFVD  SR+L+LEALSLFP  +Q+P+L  I  +   P++ +D    YE L+E+GD
Sbjct: 110  SESKLVFVDCLSRALILEALSLFPPNTQWPLLVLIADEEVAPSSTVDFICTYEDLVERGD 169

Query: 530  AEFKWIQPQNEWTPIVLNYTSGTTSSPKGVVHSHRGEFIVALDSLIEWSVPKQPVYLWTL 709
             EFKW++P++EW PI+LNYTSGTTSSPKGVVH HRG FIV +DSL+EWSVPKQPVYLWTL
Sbjct: 170  PEFKWVRPESEWDPIILNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLWTL 229

Query: 710  PMFHANGWTYTWGMAAVGGTNVCLRKFDAAIIYSEIRRHGVTHMCGAPVVLNMLANIPNP 889
            PMFH NGWT+TWGMAA+GGTNVCLRKFDA IIY  I ++G+THMC APVVLNML+N PN 
Sbjct: 230  PMFHGNGWTFTWGMAAIGGTNVCLRKFDARIIYDAIPKYGITHMCAAPVVLNMLSNYPNH 289

Query: 890  EPLPHPIHILTAGAPPPAAVLLRTESLGFIVAHGYGLTETGGLIVTCSWKHKWNRFPASQ 1069
            +PL  P+ ILTAGAPPP +VLLRTESLGF+V+HGYG+TET G++V+C+WK +W+RFPAS+
Sbjct: 290  QPLGDPVKILTAGAPPPYSVLLRTESLGFVVSHGYGMTETAGVVVSCAWKPQWDRFPASE 349

Query: 1070 RAKLKARQGVRVIGLAEMDVVDSESGLSVKRDGLSLGEVVLRGACIMLGYLKDPVGTEKC 1249
            RA++KARQGVR + + E+DVVD +SG+SVKRDG SLGE+VLRGACIMLGYLKDP GT KC
Sbjct: 350  RARVKARQGVRTVVMTEVDVVDPKSGVSVKRDGSSLGEIVLRGACIMLGYLKDPEGTSKC 409

Query: 1250 M-KNGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVELESVLYTHPAIYEAAVVA 1426
            M K GW YTGDV VMHPDGY+EIKDRSKDVIISGGENLSSVE+ESVLYTHPA+ EAAVVA
Sbjct: 410  MSKEGWLYTGDVAVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVA 469

Query: 1427 RPDEYWGETPCAFVSLKSDS-NKLTEKEVMEFCRARMPHYMVPKTVICLGELP 1582
            RPD++WGETPCAFVSLK +S +K T KE+ME+CRARMPHYMVPKTV+   ELP
Sbjct: 470  RPDDFWGETPCAFVSLKPESPDKPTAKEMMEYCRARMPHYMVPKTVVFKEELP 522


>ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
          Length = 588

 Score =  775 bits (2000), Expect = 0.0
 Identities = 375/533 (70%), Positives = 440/533 (82%), Gaps = 6/533 (1%)
 Frame = +2

Query: 2    TPLGFLERAATVYADSNSIIYNSTTYTWSQTYRRCLQLASSIVSLGIKPGNVVSVXXXXX 181
            T L FL+RAATVY D  S++YNSTTYTWSQT+ RCLQ+ASSI SLGI             
Sbjct: 54   TTLSFLDRAATVYGDCPSVVYNSTTYTWSQTHHRCLQVASSIKSLGI------------- 100

Query: 182  XXXXXXXXXXXXXPGNVVSVIAPNIPAMYELHFAVPMSGAILNSINTRLDARTISILLRH 361
                          G VVSV+APNIPAMYELHFAVPM+GA+LN+INTRLDA+T+S+LLRH
Sbjct: 101  ------------GRGQVVSVVAPNIPAMYELHFAVPMAGAVLNTINTRLDAKTVSVLLRH 148

Query: 362  SEAKLVFVDHFSRSLVLEALSLFPQESQFPILAFINTDAETPAADLD----YESLIEKGD 529
            SE+KL+FVD+ SR L+LE+LSLFP  SQ P+L  I  D ++P + +D    YE ++ +GD
Sbjct: 149  SESKLIFVDYQSRPLILESLSLFPPSSQRPLLVLITDDEDSPPSTVDFLCTYEDMVGRGD 208

Query: 530  AEFKWIQPQNEWTPIVLNYTSGTTSSPKGVVHSHRGEFIVALDSLIEWSVPKQPVYLWTL 709
             EFKWI+P++EW P++LNYTSGTTSSPKGVVH HRG FIV +DSLI+W VPKQPVYLWTL
Sbjct: 209  PEFKWIRPESEWNPMILNYTSGTTSSPKGVVHCHRGIFIVTVDSLIDWCVPKQPVYLWTL 268

Query: 710  PMFHANGWTYTWGMAAVGGTNVCLRKFDAAIIYSEIRRHGVTHMCGAPVVLNMLANIPNP 889
            PMFHANGW++ WGMAAVGGTNVCLRKFDA++IY  IR H VTHMCGAPVVLNML+N P  
Sbjct: 269  PMFHANGWSFPWGMAAVGGTNVCLRKFDASVIYEAIRVHRVTHMCGAPVVLNMLSNWPGT 328

Query: 890  EPLPHPIHILTAGAPPPAAVLLRTESLGFIVAHGYGLTETGGLIVTCSWKHKWNRFPASQ 1069
            EPL +P+ ILTAGAPPPAA+LLRTES GFIV+HGYGLTETGGL+V+C WK KWNR PA++
Sbjct: 329  EPLKNPVQILTAGAPPPAAILLRTESRGFIVSHGYGLTETGGLVVSCVWKQKWNRLPATE 388

Query: 1070 RAKLKARQGVRVIGLAEMDVVDSESGLSVKRDGLSLGEVVLRGACIMLGYLKDPVGTEKC 1249
            RA+LK+RQGVR +G+ E+DV+D  SGLSVKRDG SLGE+VLRG CIMLGYLKDP GT K 
Sbjct: 389  RARLKSRQGVRTVGMTEVDVLDPGSGLSVKRDGSSLGEIVLRGGCIMLGYLKDPKGTSKS 448

Query: 1250 M-KNGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVELESVLYTHPAIYEAAVVA 1426
            +  +GWF+TGDVGVMH DGYLEIKDRSKDVIISGGENLSSVE+ESVLYTHPA+ EAAVVA
Sbjct: 449  LTDDGWFFTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVA 508

Query: 1427 RPDEYWGETPCAFVSLKSD-SNKLTEKEVMEFCRARMPHYMVPKTVICLGELP 1582
            RPD++WGETPCAFVSLK + + + TEKE+ME+CRARMPHYMVPKTV+   ELP
Sbjct: 509  RPDDFWGETPCAFVSLKPERTEQPTEKEIMEYCRARMPHYMVPKTVVFEEELP 561


>emb|CAN64147.1| hypothetical protein VITISV_042774 [Vitis vinifera]
          Length = 537

 Score =  772 bits (1993), Expect = 0.0
 Identities = 373/529 (70%), Positives = 438/529 (82%), Gaps = 2/529 (0%)
 Frame = +2

Query: 2    TPLGFLERAATVYADSNSIIYNSTTYTWSQTYRRCLQLASSIVSLGIKPGNVVSVXXXXX 181
            TPLGFL+RAATVY D  S++YNS TYTWSQT+RRCLQ+ASSI S GI             
Sbjct: 15   TPLGFLDRAATVYGDCPSVLYNSITYTWSQTHRRCLQVASSIKSFGI------------- 61

Query: 182  XXXXXXXXXXXXXPGNVVSVIAPNIPAMYELHFAVPMSGAILNSINTRLDARTISILLRH 361
                          G+VVSV+APN+PAMYELHFAVPMSGA+LN+INTRLDART+S+LLRH
Sbjct: 62   ------------GRGHVVSVVAPNVPAMYELHFAVPMSGAVLNTINTRLDARTVSVLLRH 109

Query: 362  SEAKLVFVDHFSRSLVLEALSLFPQESQFPILAFINTDAETPAADLDYESLIEKGDAEFK 541
            SE+KLVFVD  SR+L+LEALSLFP  +Q+P+L  I  +   P++         +GD EFK
Sbjct: 110  SESKLVFVDCLSRALILEALSLFPPNTQWPLLVLIADEEVAPSS--------TRGDPEFK 161

Query: 542  WIQPQNEWTPIVLNYTSGTTSSPKGVVHSHRGEFIVALDSLIEWSVPKQPVYLWTLPMFH 721
            W++P++EW PI+LNYTSGTTSSPKGVVH HRG FIV +DSL+EWSVPKQPVYLWTLPMFH
Sbjct: 162  WVRPESEWDPIILNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLWTLPMFH 221

Query: 722  ANGWTYTWGMAAVGGTNVCLRKFDAAIIYSEIRRHGVTHMCGAPVVLNMLANIPNPEPLP 901
             NGWT+TWGMAAVGGTNVCLRKFDA IIY  I ++G+THMC APVVLNML+N PN +PL 
Sbjct: 222  GNGWTFTWGMAAVGGTNVCLRKFDARIIYDAIPKYGITHMCAAPVVLNMLSNYPNHQPLG 281

Query: 902  HPIHILTAGAPPPAAVLLRTESLGFIVAHGYGLTETGGLIVTCSWKHKWNRFPASQRAKL 1081
            +P+ ILTAGAPPP +VLLRTESLGF+V+HGYG+TET G++V+C+WK +W+RFPAS+RA++
Sbjct: 282  YPVKILTAGAPPPYSVLLRTESLGFVVSHGYGMTETAGVVVSCAWKPQWDRFPASERARV 341

Query: 1082 KARQGVRVIGLAEMDVVDSESGLSVKRDGLSLGEVVLRGACIMLGYLKDPVGTEKCM-KN 1258
            KARQGVR + + E+DVVD +SG+SVKRDG SLGE+VLRGACIMLGYLKDP GT KCM K 
Sbjct: 342  KARQGVRTVVMTEVDVVDPKSGVSVKRDGSSLGEIVLRGACIMLGYLKDPEGTSKCMSKE 401

Query: 1259 GWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVELESVLYTHPAIYEAAVVARPDE 1438
            GW YTGDV VMHPDGY+EIKDRSKDVIISGGENLSSVE+ESVLYTHPA+ EAAVVARPD+
Sbjct: 402  GWLYTGDVAVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPDD 461

Query: 1439 YWGETPCAFVSLKSDS-NKLTEKEVMEFCRARMPHYMVPKTVICLGELP 1582
            +WGETPCAFVSLK  S +K T KE+ME+CRARMPHYMVPKTV+   ELP
Sbjct: 462  FWGETPCAFVSLKPGSPDKPTAKEMMEYCRARMPHYMVPKTVVFKEELP 510


>ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus communis]
            gi|223538956|gb|EEF40553.1| AMP dependent ligase,
            putative [Ricinus communis]
          Length = 556

 Score =  766 bits (1978), Expect = 0.0
 Identities = 367/540 (67%), Positives = 437/540 (80%), Gaps = 13/540 (2%)
 Frame = +2

Query: 2    TPLGFLERAATVYADSNSIIYNSTTYTWSQTYRRCLQLASSIVSLGIKPGNVVSVXXXXX 181
            TPL FLERA+TVY D  SI+YN+ TYTWSQT+RRCLQLASS+ S G              
Sbjct: 15   TPLSFLERASTVYGDCPSIVYNTATYTWSQTHRRCLQLASSLSSGGF------------- 61

Query: 182  XXXXXXXXXXXXXPGNVVSVIAPNIPAMYELHFAVPMSGAILNSINTRLDARTISILLRH 361
                          G+VVSV+APN P MYEL FAVPMSGA+LN+INTRLDART+S+LLRH
Sbjct: 62   ------------TRGDVVSVVAPNTPPMYELQFAVPMSGAVLNNINTRLDARTVSVLLRH 109

Query: 362  SEAKLVFVDHFSRSLVLEALSLFPQESQFPILAFINTDAETPAAD-----------LDYE 508
            S++KLVFVD  SR LVLEA+SLFP   + P L  I  D E PA+              YE
Sbjct: 110  SQSKLVFVDCLSRDLVLEAVSLFPSSVKRPTLVLITDDDEAPASSSTSSSSTVDFCCTYE 169

Query: 509  SLIEKGDAEFKWIQPQNEWTPIVLNYTSGTTSSPKGVVHSHRGEFIVALDSLIEWSVPKQ 688
            S++EKGD EFKW+QPQ+EW P++LNYTSGTTSSPKGVVH HRG +I+ ++SLI+W+VP+Q
Sbjct: 170  SMVEKGDPEFKWVQPQSEWDPMILNYTSGTTSSPKGVVHCHRGIYIITVESLIDWNVPRQ 229

Query: 689  PVYLWTLPMFHANGWTYTWGMAAVGGTNVCLRKFDAAIIYSEIRRHGVTHMCGAPVVLNM 868
            PVYLWTLP+FHANGW++ WGMAAVGGTN+C+RKFDA+ IY  I+RHGVTHMCGAPVVLNM
Sbjct: 230  PVYLWTLPLFHANGWSFPWGMAAVGGTNICIRKFDASSIYGLIKRHGVTHMCGAPVVLNM 289

Query: 869  LANIPNPEPLPHPIHILTAGAPPPAAVLLRTESLGFIVAHGYGLTETGGLIVTCSWKHKW 1048
            L N P+ EPL  P+HILTAGAPPPAAVL RTESLGF+V+HGYGLTET GL+V+C+WK KW
Sbjct: 290  LTNSPDNEPLKRPVHILTAGAPPPAAVLFRTESLGFVVSHGYGLTETAGLVVSCAWKPKW 349

Query: 1049 NRFPASQRAKLKARQGVRVIGLAEMDVVDSESGLSVKRDGLSLGEVVLRGACIMLGYLKD 1228
            N  PAS+RA+LKARQGVR+ G  E+DV+D ++GLSVKRDGLSLGE+VLRG C+M+GYLKD
Sbjct: 350  NTVPASERARLKARQGVRIAGFTEIDVIDPKTGLSVKRDGLSLGEIVLRGGCVMMGYLKD 409

Query: 1229 PVGTEKCMK-NGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVELESVLYTHPAI 1405
            P GT KC+K +GWFYTGDVGVMHPDGYLEIKDRSKDVIISGGEN+SSVE+ESVLY++P +
Sbjct: 410  PDGTSKCLKDDGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENISSVEVESVLYSNPVV 469

Query: 1406 YEAAVVARPDEYWGETPCAFVSLKSDS-NKLTEKEVMEFCRARMPHYMVPKTVICLGELP 1582
             EAAVVARPDEYWGETPCAFVSL+  +  K++EK+++E+CR +MPHYMVPKTV+   ELP
Sbjct: 470  NEAAVVARPDEYWGETPCAFVSLRDGAREKVSEKDIIEYCREKMPHYMVPKTVVFKEELP 529


>ref|XP_002329170.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
            trichocarpa] gi|222870951|gb|EEF08082.1| acyl:coa ligase
            acetate-coa synthetase-like protein [Populus trichocarpa]
          Length = 550

 Score =  761 bits (1966), Expect = 0.0
 Identities = 368/534 (68%), Positives = 430/534 (80%), Gaps = 7/534 (1%)
 Frame = +2

Query: 2    TPLGFLERAATVYADSNSIIYNSTTYTWSQTYRRCLQLASSIVSLGIKPGNVVSVXXXXX 181
            TPL FLER ATVY D  S+IYN++TYTWSQT+RRCLQ+ASS+ S GIKPG+VVS      
Sbjct: 15   TPLAFLERTATVYGDCPSVIYNNSTYTWSQTHRRCLQVASSLSSYGIKPGHVVS------ 68

Query: 182  XXXXXXXXXXXXXPGNVVSVIAPNIPAMYELHFAVPMSGAILNSINTRLDARTISILLRH 361
                               V+APNIPAMYEL FAVPMSGAILN+INTRLDART+SILLRH
Sbjct: 69   -------------------VVAPNIPAMYELQFAVPMSGAILNNINTRLDARTMSILLRH 109

Query: 362  SEAKLVFVDHFSRSLVLEALSLFPQESQFPILAFINTDAETPAADLD------YESLIEK 523
            SE+KLVFVD  SR ++L+A+SL P  ++ P L  I  DAE   + +       YES++EK
Sbjct: 110  SESKLVFVDCLSRDVILDAMSLLPPNTKRPPLVLIADDAEAAESSITDDFCCAYESMVEK 169

Query: 524  GDAEFKWIQPQNEWTPIVLNYTSGTTSSPKGVVHSHRGEFIVALDSLIEWSVPKQPVYLW 703
            GD  FKW+QP +EW P+VLNYTSGTTSSPKGVVH HR  F + + SLI+W VPKQPVYLW
Sbjct: 170  GDPGFKWVQPHSEWDPMVLNYTSGTTSSPKGVVHCHRSVFTITVGSLIDWGVPKQPVYLW 229

Query: 704  TLPMFHANGWTYTWGMAAVGGTNVCLRKFDAAIIYSEIRRHGVTHMCGAPVVLNMLANIP 883
            TLP+FHANGW+Y WG+AAVGGTN+CLRKFD   IYS I+RHGVTHMCGAPVVL ML N  
Sbjct: 230  TLPIFHANGWSYPWGIAAVGGTNICLRKFDGPTIYSLIKRHGVTHMCGAPVVLTMLTNST 289

Query: 884  NPEPLPHPIHILTAGAPPPAAVLLRTESLGFIVAHGYGLTETGGLIVTCSWKHKWNRFPA 1063
            N EPL +PI ILTAGAPPP+AVL RTESLGF+V+HGYGLTET GL+V+C+WK KWN FP 
Sbjct: 290  NKEPLRNPIQILTAGAPPPSAVLFRTESLGFVVSHGYGLTETAGLVVSCAWKPKWNTFPP 349

Query: 1064 SQRAKLKARQGVRVIGLAEMDVVDSESGLSVKRDGLSLGEVVLRGACIMLGYLKDPVGTE 1243
            S+RA+LKARQGV+++G  E+DV++ ESG SVKRDG++LGEVVL+G CIMLGYLKDP GT 
Sbjct: 350  SERARLKARQGVKIVGFTEIDVLEPESGKSVKRDGVALGEVVLKGGCIMLGYLKDPTGTS 409

Query: 1244 KCMKNGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVELESVLYTHPAIYEAAVV 1423
            KCMK+GWFYTGDVGVMH DGYLEIKDRSKDVIISGGEN+SSVE+ESVLYTHPA+ EAAVV
Sbjct: 410  KCMKDGWFYTGDVGVMHQDGYLEIKDRSKDVIISGGENISSVEIESVLYTHPAVNEAAVV 469

Query: 1424 ARPDEYWGETPCAFVSLKSD-SNKLTEKEVMEFCRARMPHYMVPKTVICLGELP 1582
            ARPDE+WGETPCAFV LK   + K  EK++++FCR +MPHYMVPKTV+   ELP
Sbjct: 470  ARPDEFWGETPCAFVGLKDGLTQKPGEKDMIDFCREKMPHYMVPKTVVFKDELP 523


Top