BLASTX nr result

ID: Coptis24_contig00002172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002172
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76136.1| hypothetical protein VITISV_034276 [Vitis vinifera]   165   1e-38
ref|XP_002283659.1| PREDICTED: uncharacterized protein LOC100255...   165   1e-38
ref|XP_002307950.1| predicted protein [Populus trichocarpa] gi|2...   148   2e-33
ref|XP_002322599.1| predicted protein [Populus trichocarpa] gi|2...   145   9e-33
ref|XP_002521033.1| conserved hypothetical protein [Ricinus comm...   142   1e-31

>emb|CAN76136.1| hypothetical protein VITISV_034276 [Vitis vinifera]
          Length = 219

 Score =  165 bits (418), Expect = 1e-38
 Identities = 106/229 (46%), Positives = 137/229 (59%), Gaps = 7/229 (3%)
 Frame = -3

Query: 732 MASSDNLASLEPWSFRTSFPDSWISEAYSRDTETLTRALQKSLSSNTNSXXXXXXXXXXX 553
           MASSDNLAS++PW FR +F DSWISEA++RDTETLT+ALQKS+S++ ++           
Sbjct: 1   MASSDNLASVDPWVFRHTFADSWISEAFARDTETLTKALQKSISNHPDNVACDTISPFLN 60

Query: 552 XXXFYVKDEQLFPTVSDPDTMVPKQQRRNNAAIISTSTTNGGRIXXXXXXXXXXSPTTFI 373
                  +    P+VS       +   +   AI   +   GG+I          S TTFI
Sbjct: 61  DLLK--PETAQTPSVSGVSGSDHETAPKRRTAIPGAA---GGKITKRKSRASKRSQTTFI 115

Query: 372 AADPSNFRQMVQQVTGIRFGDAPNVQQFTTTVLKPAPQRLGNRIPTYAMPTLDTSSAFLL 193
            ADP+NFRQMVQQVTG+RFG   N Q     +LKP P+R GNR+    +PTLDTS  FLL
Sbjct: 116 TADPANFRQMVQQVTGVRFG---NSQLPVNPILKPEPKRPGNRL-LGCLPTLDTSE-FLL 170

Query: 192 DNNHXXXXXXXTSQE-----QPV--EGGGTGLDFATFHNFPTLESWRVM 67
           D++H       T+ +     QPV  +GG TGL+F TF +FPTLESW+VM
Sbjct: 171 DHHHQQVMGPATATQGAMTFQPVVADGGATGLEFETFPSFPTLESWKVM 219


>ref|XP_002283659.1| PREDICTED: uncharacterized protein LOC100255095 [Vitis vinifera]
          Length = 219

 Score =  165 bits (417), Expect = 1e-38
 Identities = 109/234 (46%), Positives = 141/234 (60%), Gaps = 12/234 (5%)
 Frame = -3

Query: 732 MASSDNLASLEPWSFRTSFPDSWISEAYSRDTETLTRALQKSLSSNTNSXXXXXXXXXXX 553
           MASSDNLAS++PW FR +F DSWISEA++RDTETLT+ALQKS+S++ ++           
Sbjct: 1   MASSDNLASVDPWVFRHTFADSWISEAFARDTETLTKALQKSISNHPDNVACDTISPFLN 60

Query: 552 XXXFYVKDEQLFPTV-----SDPDTMVPKQQRRNNAAIISTSTTNGGRIXXXXXXXXXXS 388
                  +    P+V     SD +T  PK++     A+       GG+I          S
Sbjct: 61  DLLK--PETAQTPSVSGVSGSDHET-APKRRTAIPGAV-------GGKITKRKSRASKRS 110

Query: 387 PTTFIAADPSNFRQMVQQVTGIRFGDAPNVQQFTTTVLKPAPQRLGNRIPTYAMPTLDTS 208
            TTFI ADP+NFRQMVQQVTG+RFG   N Q     +LKP P+R GNR+    +PTLDTS
Sbjct: 111 QTTFITADPANFRQMVQQVTGVRFG---NSQLPVNPILKPEPKRPGNRL-LGCLPTLDTS 166

Query: 207 SAFLLDNNHXXXXXXXTSQE-----QPV--EGGGTGLDFATFHNFPTLESWRVM 67
             FLLD++H       T+ +     QPV  +GG TGL+F TF +FPTLESW+VM
Sbjct: 167 E-FLLDHHHQQVMGPATATQGAMTFQPVVADGGATGLEFETFPSFPTLESWKVM 219


>ref|XP_002307950.1| predicted protein [Populus trichocarpa] gi|222853926|gb|EEE91473.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  148 bits (373), Expect = 2e-33
 Identities = 113/270 (41%), Positives = 140/270 (51%), Gaps = 48/270 (17%)
 Frame = -3

Query: 732 MASSDNLASLEPWS--FRTSFPDSWISEAYSRDTETLTRALQKSLSSN------------ 595
           MASS+NLASLEPW+  FR +FPD W+ EAY+RDTETLT+ALQKSL +N            
Sbjct: 1   MASSENLASLEPWNMMFRPNFPDFWLPEAYARDTETLTKALQKSLFNNIDDTPTDTNTDD 60

Query: 594 --TNSXXXXXXXXXXXXXXFYVKDEQLFPTV-------SDPDTMVPKQQRRNNAAIISTS 442
             TNS              F    E   PT        SDP+T    +++RN   ++  +
Sbjct: 61  NSTNSFSMNETFSSNSFNPFTSLIETAPPTPTASNVSGSDPETAGATKRQRN---LVPGA 117

Query: 441 TTNGGRIXXXXXXXXXXSPTTFIAADPSNFRQMVQQVTGIRFGDAPNVQQFTTTVLKPAP 262
           T   G++          S TTFI ADP+NFRQMVQQVTG+RFG   N Q     VLKP P
Sbjct: 118 T---GKVSKRKTRASKRSQTTFITADPANFRQMVQQVTGVRFG---NSQVSMVPVLKPEP 171

Query: 261 QRLGNR--IPTYAMPTLDTSSAFLLDN------NHXXXXXXXTSQEQPVEGGG------- 127
           QR G R  + +  +PTLDT SAFLLD+      +H        S   P  G G       
Sbjct: 172 QRPGGRLLVGSGYLPTLDT-SAFLLDHHQQQLQHHVVTGSTSGSSTGPDFGPGPNLFTQP 230

Query: 126 ----------TGLDFATFHNFPTLESWRVM 67
                     +GLDF TF +FPTLESW+V+
Sbjct: 231 MVGDVGVHSSSGLDFGTFSSFPTLESWKVV 260


>ref|XP_002322599.1| predicted protein [Populus trichocarpa] gi|222867229|gb|EEF04360.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  145 bits (367), Expect = 9e-33
 Identities = 108/265 (40%), Positives = 131/265 (49%), Gaps = 43/265 (16%)
 Frame = -3

Query: 732 MASSDNLASLEPWS--FRTSFPDSWISEAYSRDTETLTRALQKSL--------------- 604
           MASS+NLASLEPW+  FR S  D WISEAY+RDTETLT+ALQKSL               
Sbjct: 1   MASSENLASLEPWNMMFRPSLSDCWISEAYARDTETLTKALQKSLFNNIDDIDIPINTNT 60

Query: 603 ---SSNTNSXXXXXXXXXXXXXXFYVKDEQLFPTVS-----DPDTMVPKQQRRNNAAIIS 448
              SSN+ S                ++     PT S     DP+T    ++ RN     +
Sbjct: 61  NDNSSNSFSITETFSSNSINPFTGLIETAPPTPTPSNVSGSDPETAGVTKRHRNPVPGAT 120

Query: 447 TSTTNGGRIXXXXXXXXXXSPTTFIAADPSNFRQMVQQVTGIRFGDAPNVQQFTTTVLKP 268
                 G++          S TTFI ADP+NFRQMVQQVTG+RF    N Q     VLKP
Sbjct: 121 ------GKVSKRKSRASKRSQTTFITADPANFRQMVQQVTGVRFN---NSQVSMVPVLKP 171

Query: 267 APQRLGNRIP--TYAMPTLDTSSAFLLDNNHXXXXXXXTSQEQPVE-------------- 136
            PQRLG R    +  +PTLDT SAFLLD++         S   P                
Sbjct: 172 EPQRLGGRFQGGSGCLPTLDT-SAFLLDHHQQQVVMGSASGSSPGSGPVSFTQQPMMGDV 230

Query: 135 --GGGTGLDFATFHNFPTLESWRVM 67
             G   G+DF TF +FPTLESW+V+
Sbjct: 231 GVGSSGGIDFDTFSSFPTLESWKVV 255


>ref|XP_002521033.1| conserved hypothetical protein [Ricinus communis]
           gi|223539736|gb|EEF41317.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  142 bits (358), Expect = 1e-31
 Identities = 108/266 (40%), Positives = 137/266 (51%), Gaps = 44/266 (16%)
 Frame = -3

Query: 732 MASSDNLASLEPWSFRTSFPDSWISEAYSRDTETLTRALQKSLSSNTN----SXXXXXXX 565
           MASS+NLAS EP+ FR +FPDSWISEAY+RDT+ LT+ALQKSLS+N N    S       
Sbjct: 1   MASSENLASFEPFFFRHTFPDSWISEAYARDTDALTKALQKSLSNNNNNNNNSLLEVLTS 60

Query: 564 XXXXXXXFYVKDEQ------LFPTVS-----DPDT-MVPKQQRRNNAAIISTSTTNGGRI 421
                    + + +        PT S     +P+T   P  +R+ N    +T     G+ 
Sbjct: 61  DSLINPFLNLSNSESNASPITTPTASNVSGSEPETPSAPPPKRQRNGIPAAT-----GKF 115

Query: 420 XXXXXXXXXXSPTTFIAADPSNFRQMVQQVTGIRFGDAPNVQQFTTTVLKPAPQRLGNRI 241
                     S TTFI+ADP+NFRQMVQQVTG+R     N Q     VLKP PQR G+R+
Sbjct: 116 SKRKSRASKRSQTTFISADPANFRQMVQQVTGVRL---DNSQFPVVPVLKPEPQRPGSRL 172

Query: 240 --PTYAMPTLDTSSAFLLDNNHXXXXXXXTSQEQPVEGGGT------------------- 124
                 +PTLDT SAFLLD++H         Q+Q + GG T                   
Sbjct: 173 RGAPGGLPTLDT-SAFLLDHHH-------HQQQQQMVGGATSSSGPIVGRDPVSFSQAVL 224

Query: 123 -------GLDFATFHNFPTLESWRVM 67
                  GL+F TF +FPTLES +VM
Sbjct: 225 ADGGPSAGLEFDTFSSFPTLESGKVM 250


Top