BLASTX nr result
ID: Coptis24_contig00002143
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002143 (272 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI40274.3| unnamed protein product [Vitis vinifera] 65 6e-09 emb|CAN60920.1| hypothetical protein VITISV_019335 [Vitis vinifera] 65 6e-09 ref|XP_002518693.1| conserved hypothetical protein [Ricinus comm... 63 3e-08 ref|XP_002300232.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-08 gb|AFK40095.1| unknown [Medicago truncatula] 62 6e-08 >emb|CBI40274.3| unnamed protein product [Vitis vinifera] Length = 173 Score = 65.1 bits (157), Expect = 6e-09 Identities = 32/36 (88%), Positives = 33/36 (91%), Gaps = 1/36 (2%) Frame = -2 Query: 271 EGLKLDDINPGIYSVHCLPLRL-PADGSPIRCILIK 167 EGLKLDDI PGIYSVHCLPLRL A+GSPIRCILIK Sbjct: 137 EGLKLDDIKPGIYSVHCLPLRLFGAEGSPIRCILIK 172 >emb|CAN60920.1| hypothetical protein VITISV_019335 [Vitis vinifera] Length = 246 Score = 65.1 bits (157), Expect = 6e-09 Identities = 32/36 (88%), Positives = 33/36 (91%), Gaps = 1/36 (2%) Frame = -2 Query: 271 EGLKLDDINPGIYSVHCLPLRL-PADGSPIRCILIK 167 EGLKLDDI PGIYSVHCLPLRL A+GSPIRCILIK Sbjct: 210 EGLKLDDIKPGIYSVHCLPLRLFGAEGSPIRCILIK 245 >ref|XP_002518693.1| conserved hypothetical protein [Ricinus communis] gi|223542074|gb|EEF43618.1| conserved hypothetical protein [Ricinus communis] Length = 260 Score = 62.8 bits (151), Expect = 3e-08 Identities = 30/36 (83%), Positives = 32/36 (88%), Gaps = 1/36 (2%) Frame = -2 Query: 271 EGLKLDDINPGIYSVHCLPLR-LPADGSPIRCILIK 167 EGLKLDDI PG+Y+VHCLPLR L ADGSP RCILIK Sbjct: 225 EGLKLDDIQPGLYNVHCLPLRLLRADGSPARCILIK 260 >ref|XP_002300232.1| predicted protein [Populus trichocarpa] gi|222847490|gb|EEE85037.1| predicted protein [Populus trichocarpa] Length = 268 Score = 62.0 bits (149), Expect = 5e-08 Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 1/36 (2%) Frame = -2 Query: 271 EGLKLDDINPGIYSVHCLPLRL-PADGSPIRCILIK 167 E LKLDDI PG+YSVHCLPLRL A+GSPIRC+LIK Sbjct: 233 EALKLDDIQPGVYSVHCLPLRLFGAEGSPIRCVLIK 268 >gb|AFK40095.1| unknown [Medicago truncatula] Length = 254 Score = 61.6 bits (148), Expect = 6e-08 Identities = 30/36 (83%), Positives = 32/36 (88%), Gaps = 1/36 (2%) Frame = -2 Query: 271 EGLKLDDINPGIYSVHCLPLRLP-ADGSPIRCILIK 167 E LKLDDI PG+YSVHCLPLRL A+GSPIRCILIK Sbjct: 218 ESLKLDDIPPGLYSVHCLPLRLAGAEGSPIRCILIK 253