BLASTX nr result
ID: Coptis24_contig00002105
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002105 (2411 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi... 920 0.0 ref|XP_002515260.1| pentatricopeptide repeat-containing protein,... 911 0.0 ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containi... 880 0.0 ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containi... 878 0.0 ref|XP_002301519.1| predicted protein [Populus trichocarpa] gi|2... 841 0.0 >ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Vitis vinifera] Length = 867 Score = 920 bits (2378), Expect(2) = 0.0 Identities = 462/614 (75%), Positives = 531/614 (86%), Gaps = 3/614 (0%) Frame = -2 Query: 2080 LKPNLVTYNAVIDAFAKGGVDFSKAVEIFDEMVANGVQPDRITFNSLLAVCSRGGLWEQA 1901 LKPNLVTYNAVIDA KGGVDF++A EIFDEM+ NGVQPDRITFNSLLAVC RGGLWE A Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310 Query: 1900 KNLFGEMVNRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDG 1721 +NLF EM+ RGI+QDIFTYNTLLDAVCKGGQMDLAF+IMSEM K+++PNVVTYST+IDG Sbjct: 311 RNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDG 370 Query: 1720 CAKAGKLEEALNLFDEMKHLGIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKD 1541 AKAG+L+EALNLF+EMK I LDRVSYNTLL+IYA LGRF+EA+ +CK ME + IKKD Sbjct: 371 YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKD 430 Query: 1540 VVTYNALLRNYGKQGIYDEVKKLFRDMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFR 1361 VTYNALL YGKQG Y+EVK++F +MK E + PNLLTYSTLIDVYSKGGLYQEAME+FR Sbjct: 431 AVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFR 490 Query: 1360 ELKQAGLEADVVLYSALIDALCKNGLVESAVSLLDELTREGKPPNVVTYNSIIDAFGRSA 1181 E K+AGL+ADVVLYSALIDALCKNGLVESAVS LDE+T+EG PNVVTYNSIIDAFGRS Sbjct: 491 EFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 550 Query: 1180 ITKFQEGAASETDELMNESSVCMVLQNANEGK--ESNDDRVMQLFEQLAAEKAHPSKEEA 1007 + ET+ SS V+++A E + + D++++++F QLAAEK +K+E Sbjct: 551 SAECVIDPPYETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKEN 610 Query: 1006 KGESQELLCILGLFHKMHELNIKPNVVTFSAILNACSRCNSFEDASILLEELRLFDNQVY 827 +G QE+LCIL +FHKMHEL+IKPNVVTFSAILNACSRCNSFEDAS+LLEELRLFDNQVY Sbjct: 611 RGR-QEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 669 Query: 826 GVAHGLLMGSRENVWIQAQTLFDEVKRMDASTASAFYNALTDVLWHFGQRQGAQLVVLEG 647 GVAHGLLMG +NVW+QAQ+LFDEVK+MD+STASAFYNALTD+LWHFGQR+GAQLVVLEG Sbjct: 670 GVAHGLLMGYGDNVWVQAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEG 729 Query: 646 NRRHVWENAWCVSCLDLHLMSSGAAQAMVHAWLLNIRSIVFEGHELPE-LSILTGWGKHS 470 RRHVWEN W SCLDLHLMSSGAA+AMVHAWLLNIRSIVFEGHELP+ LSILTGWGKHS Sbjct: 730 KRRHVWENMWSNSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGHELPQLLSILTGWGKHS 789 Query: 469 KVAGDGTLRRVVQALLIRIGAPFHVAKSNIGRFISTGSVVAAWLRESGTLKVLILHDDRT 290 KV GDG LRR ++ALL +GAPF VAK N+GRFISTG+VVAAWLRESGTLKVL+LHDDRT Sbjct: 790 KVVGDGALRRAIEALLTGMGAPFRVAKCNLGRFISTGAVVAAWLRESGTLKVLVLHDDRT 849 Query: 289 HPETLRLNQHTGMQ 248 +P+ R +Q + +Q Sbjct: 850 NPDRARCSQISNLQ 863 Score = 146 bits (369), Expect(2) = 0.0 Identities = 69/89 (77%), Positives = 83/89 (93%) Frame = -3 Query: 2409 VRCFEFAIQREQKRNEQGKLASSMISVLGRLGRVDLAKRVFETANRDGYGNTVYAFSALI 2230 +RCFEFA++REQ+RNEQGKLAS+MIS+LGRLG+V+LAK VFETA +GYGNTVYAFSALI Sbjct: 168 IRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALI 227 Query: 2229 SAYGRSGCCEKALMVFDSMKKSGLKPNLV 2143 SAYGRSG C++A+ VF++MK SGLKPNLV Sbjct: 228 SAYGRSGYCDEAIKVFETMKSSGLKPNLV 256 Score = 169 bits (428), Expect = 3e-39 Identities = 108/370 (29%), Positives = 193/370 (52%), Gaps = 13/370 (3%) Frame = -2 Query: 1948 NSLLAVCSRGGLWEQAKNLFGEMVNRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMTV 1769 ++++++ R G E AKN+F +N G ++ ++ L+ A + G D A ++ M Sbjct: 189 SAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKS 248 Query: 1768 KNVLPNVVTYSTMIDGCAKAG-KLEEALNLFDEMKHLGIRLDRVSYNTLLAIYASLGRFQ 1592 + PN+VTY+ +ID C K G A +FDEM G++ DR+++N+LLA+ G ++ Sbjct: 249 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWE 308 Query: 1591 EAMGICKMMERANIKKDVVTYNALLRNYGKQGIYDEVKKLFRDMKEENLTPNLLTYSTLI 1412 A + M I++D+ TYN LL K G D ++ +M +++ PN++TYST+I Sbjct: 309 AARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVI 368 Query: 1411 DVYSKGGLYQEAMEIFRELKQAGLEADVVLYSALIDALCKNGLVESAVSLLDELTREGKP 1232 D Y+K G EA+ +F E+K A + D V Y+ L+ K G E A+++ E+ G Sbjct: 369 DGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIK 428 Query: 1231 PNVVTYNSIIDAFGRSAITK-----FQEGAASET-DELMNESSVCMVLQNANEGKESNDD 1070 + VTYN+++ +G+ + F+E A L+ S++ V +E+ Sbjct: 429 KDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEA--- 485 Query: 1069 RVMQLFEQL--AAEKA----HPSKEEAKGESQELLCILGLFHKMHELNIKPNVVTFSAIL 908 M++F + A KA + + +A ++ + + +M + I+PNVVT+++I+ Sbjct: 486 --MEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSII 543 Query: 907 NACSRCNSFE 878 +A R S E Sbjct: 544 DAFGRSGSAE 553 >ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 878 Score = 911 bits (2355), Expect(2) = 0.0 Identities = 458/603 (75%), Positives = 523/603 (86%), Gaps = 3/603 (0%) Frame = -2 Query: 2080 LKPNLVTYNAVIDAFAKGGVDFSKAVEIFDEMVANGVQPDRITFNSLLAVCSRGGLWEQA 1901 L PNLVTYNAVIDA KGGV+F K VEIFD M++NGVQPDRITFNSLLAVCSRGGLWE A Sbjct: 256 LMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAA 315 Query: 1900 KNLFGEMVNRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDG 1721 + LF MV++GIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEM KN+LPNVVTYSTMIDG Sbjct: 316 RRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDG 375 Query: 1720 CAKAGKLEEALNLFDEMKHLGIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKD 1541 AK G+L++ALN+F+EMK LG+ LDRVSYNTLL++YA LGRF++A+ +CK ME A I+KD Sbjct: 376 YAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKD 435 Query: 1540 VVTYNALLRNYGKQGIYDEVKKLFRDMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFR 1361 VVTYNALL YGKQ YDEV+++F +MK ++PNLLTYSTLIDVYSKGGLY+EAME+FR Sbjct: 436 VVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFR 495 Query: 1360 ELKQAGLEADVVLYSALIDALCKNGLVESAVSLLDELTREGKPPNVVTYNSIIDAFGRSA 1181 E KQAGL+ADVVLYSALIDALCKNGLVES+V+LLDE+T+EG PNVVTYNSIIDAFGRSA Sbjct: 496 EFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSA 555 Query: 1180 ITKFQEGAASETDELMNESSVCMVLQNANEGK--ESNDDRVMQLFEQLAAEKAHPSKEEA 1007 + + ET L ES +V+Q A E + + D+R++++F +LAAEKA +K Sbjct: 556 SAQCVVDDSGETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSG 615 Query: 1006 KGESQELLCILGLFHKMHELNIKPNVVTFSAILNACSRCNSFEDASILLEELRLFDNQVY 827 K QE+LCILG+F KMHEL IKPNVVTFSAILNACSRC+SFEDAS+LLEELRLFDNQVY Sbjct: 616 K---QEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEELRLFDNQVY 672 Query: 826 GVAHGLLMGSRENVWIQAQTLFDEVKRMDASTASAFYNALTDVLWHFGQRQGAQLVVLEG 647 GVAHGLLMG RENVW+QAQ+LFDEVK MD+STASAFYNALTD+LWHFGQ++GAQLVVLEG Sbjct: 673 GVAHGLLMGYRENVWLQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 732 Query: 646 NRRHVWENAWCVSCLDLHLMSSGAAQAMVHAWLLNIRSIVFEGHELPE-LSILTGWGKHS 470 RR VWEN W SCLDLHLMSSGAA+AMVHAWLLNIRSIVFEGHELP+ LSILTGWGKHS Sbjct: 733 KRRQVWENIWSDSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGHELPKLLSILTGWGKHS 792 Query: 469 KVAGDGTLRRVVQALLIRIGAPFHVAKSNIGRFISTGSVVAAWLRESGTLKVLILHDDRT 290 KV GD LRR V+ALLI +GAPF +AK N+GRFISTGSVVAAWL+ESGTL+VL+LHDDRT Sbjct: 793 KVVGDSALRRAVEALLIGMGAPFRLAKCNLGRFISTGSVVAAWLKESGTLEVLVLHDDRT 852 Query: 289 HPE 281 HPE Sbjct: 853 HPE 855 Score = 137 bits (344), Expect(2) = 0.0 Identities = 66/89 (74%), Positives = 78/89 (87%) Frame = -3 Query: 2409 VRCFEFAIQREQKRNEQGKLASSMISVLGRLGRVDLAKRVFETANRDGYGNTVYAFSALI 2230 VRCFEFA++RE +NEQGKLAS+MIS LGRLG+V+LAK VF+TA ++GYG TVYAFSALI Sbjct: 173 VRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALI 232 Query: 2229 SAYGRSGCCEKALMVFDSMKKSGLKPNLV 2143 SAYGRSG C +A+ VFDSMK +GL PNLV Sbjct: 233 SAYGRSGYCNEAIKVFDSMKSNGLMPNLV 261 Score = 164 bits (415), Expect = 1e-37 Identities = 110/393 (27%), Positives = 202/393 (51%), Gaps = 14/393 (3%) Frame = -2 Query: 2020 DFSKAVEIFDEMVA--NGVQPDRITFNSLLAVCSRGGLWEQAKNLFGEMVNRGIDQDIFT 1847 D +KAV F+ V +G +++++ R G E AK +F + G + ++ Sbjct: 168 DSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYA 227 Query: 1846 YNTLLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDGCAKAG-KLEEALNLFDEM 1670 ++ L+ A + G + A ++ M ++PN+VTY+ +ID C K G + ++ + +FD M Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGM 287 Query: 1669 KHLGIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKDVVTYNALLRNYGKQGIY 1490 G++ DR+++N+LLA+ + G ++ A + M I +D+ TYN LL K G Sbjct: 288 LSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQM 347 Query: 1489 DEVKKLFRDMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFRELKQAGLEADVVLYSAL 1310 D ++ +M +N+ PN++TYST+ID Y+K G +A+ +F E+K G+ D V Y+ L Sbjct: 348 DLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTL 407 Query: 1309 IDALCKNGLVESAVSLLDELTREGKPPNVVTYNSIIDAFG--------RSAITKFQEGAA 1154 + K G E A+ + E+ G +VVTYN+++ +G R + + G Sbjct: 408 LSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRV 467 Query: 1153 SETDELMNESSVCMVLQNANEGKESNDDRVMQLFEQLAAEK---AHPSKEEAKGESQELL 983 S L+ S++ V KE+ + V + F+Q + + + +A ++ + Sbjct: 468 S--PNLLTYSTLIDVYSKGGLYKEAME--VFREFKQAGLKADVVLYSALIDALCKNGLVE 523 Query: 982 CILGLFHKMHELNIKPNVVTFSAILNACSRCNS 884 + L +M + I+PNVVT+++I++A R S Sbjct: 524 SSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSAS 556 >ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucumis sativus] Length = 868 Score = 880 bits (2275), Expect(2) = 0.0 Identities = 438/613 (71%), Positives = 519/613 (84%), Gaps = 2/613 (0%) Frame = -2 Query: 2080 LKPNLVTYNAVIDAFAKGGVDFSKAVEIFDEMVANGVQPDRITFNSLLAVCSRGGLWEQA 1901 LKPNLVTYNAVIDA KGGV+F + VEIF+EM+ NGVQPDRIT+NSLLAVCSRGGLWE A Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312 Query: 1900 KNLFGEMVNRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDG 1721 +NLF EM++RGIDQD+FTYNTLLDAVCKGGQMDLA+EIM EM K +LPNVVTYSTM DG Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADG 372 Query: 1720 CAKAGKLEEALNLFDEMKHLGIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKD 1541 AKAG+LE+ALNL++EMK LGI LDRVSYNTLL+IYA LGRF++A+ +CK M + +KKD Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKD 432 Query: 1540 VVTYNALLRNYGKQGIYDEVKKLFRDMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFR 1361 VVTYNALL YGKQG ++EV ++F++MK++ + PNLLTYSTLIDVYSKG LY+EAME+FR Sbjct: 433 VVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFR 492 Query: 1360 ELKQAGLEADVVLYSALIDALCKNGLVESAVSLLDELTREGKPPNVVTYNSIIDAFGRSA 1181 E KQAGL+ADVVLYS LI+ALCKNGLV+SAV LLDE+T+EG PNVVTYNSIIDAFGRS Sbjct: 493 EFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRST 552 Query: 1180 ITKFQEGAASETDELMNESSVCMVLQNANEGKESNDD-RVMQLFEQLAAEKAHPSKEEAK 1004 +F ++E +ES M+++ +E + + DD V + ++QL +EK P+K+E Sbjct: 553 TAEFLVDGVGASNERQSESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERL 612 Query: 1003 GESQELLCILGLFHKMHELNIKPNVVTFSAILNACSRCNSFEDASILLEELRLFDNQVYG 824 G+ +E+ IL +F KMHEL IKPNVVTFSAILNACSRC S EDAS+LLEELRLFDNQVYG Sbjct: 613 GK-EEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYG 671 Query: 823 VAHGLLMGSRENVWIQAQTLFDEVKRMDASTASAFYNALTDVLWHFGQRQGAQLVVLEGN 644 VAHGLLMG ENVWIQAQ LFDEVK+MD+STASAFYNALTD+LWHFGQ++GAQLVVLEG Sbjct: 672 VAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGK 731 Query: 643 RRHVWENAWCVSCLDLHLMSSGAAQAMVHAWLLNIRSIVFEGHELPE-LSILTGWGKHSK 467 RR VWE W SCLDLHLMSSGAA+AMVHAWLL I S+VFEGH+LP+ LSILTGWGKHSK Sbjct: 732 RRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGHQLPKLLSILTGWGKHSK 791 Query: 466 VAGDGTLRRVVQALLIRIGAPFHVAKSNIGRFISTGSVVAAWLRESGTLKVLILHDDRTH 287 V GDG LRR ++ALL +GAPF VAK NIGR++STGSVVAAWL+ESGTLK+L+LHDDRTH Sbjct: 792 VVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLKLLVLHDDRTH 851 Query: 286 PETLRLNQHTGMQ 248 P+T ++ + +Q Sbjct: 852 PDTENMDLISKLQ 864 Score = 130 bits (326), Expect(2) = 0.0 Identities = 63/89 (70%), Positives = 79/89 (88%) Frame = -3 Query: 2409 VRCFEFAIQREQKRNEQGKLASSMISVLGRLGRVDLAKRVFETANRDGYGNTVYAFSALI 2230 +RCF+FA+ RE ++NE+GKLAS+MIS LGRLG+V+LAK VFETA +GYGNTV+AFSALI Sbjct: 170 IRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALI 229 Query: 2229 SAYGRSGCCEKALMVFDSMKKSGLKPNLV 2143 SAYG+SG ++A+ VF+SMK SGLKPNLV Sbjct: 230 SAYGKSGYFDEAIKVFESMKVSGLKPNLV 258 Score = 174 bits (440), Expect = 1e-40 Identities = 116/396 (29%), Positives = 197/396 (49%), Gaps = 18/396 (4%) Frame = -2 Query: 2011 KAVEIFD-EMVANGVQPDRITFNS-LLAVCSRGGLWEQAKNLFGEMVNRGIDQDIFTYNT 1838 KA+ FD +V G + +R S +++ R G E AK +F ++ G +F ++ Sbjct: 168 KAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSA 227 Query: 1837 LLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDGCAKAG-KLEEALNLFDEMKHL 1661 L+ A K G D A ++ M V + PN+VTY+ +ID C K G + + + +F+EM Sbjct: 228 LISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRN 287 Query: 1660 GIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKDVVTYNALLRNYGKQGIYDEV 1481 G++ DR++YN+LLA+ + G ++ A + M I +DV TYN LL K G D Sbjct: 288 GVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLA 347 Query: 1480 KKLFRDMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFRELKQAGLEADVVLYSALIDA 1301 ++ +M + + PN++TYST+ D Y+K G ++A+ ++ E+K G+ D V Y+ L+ Sbjct: 348 YEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSI 407 Query: 1300 LCKNGLVESAVSLLDELTREGKPPNVVTYNSIIDAFGRSAITKFQEGAASETDELMNESS 1121 K G E A+ + E+ G +VVTYN+++D +G+ +G +E + E Sbjct: 408 YAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGK-------QGKFNEVTRVFKEMK 460 Query: 1120 VCMVLQNANE--------GKESNDDRVMQLFEQLAAEKAHPSKEEAKGESQELLCILG-- 971 V N K S + M++F + + + E LC G Sbjct: 461 KDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF-KQAGLKADVVLYSELINALCKNGLV 519 Query: 970 -----LFHKMHELNIKPNVVTFSAILNACSRCNSFE 878 L +M + I+PNVVT+++I++A R + E Sbjct: 520 DSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAE 555 Score = 105 bits (263), Expect = 4e-20 Identities = 93/398 (23%), Positives = 181/398 (45%), Gaps = 25/398 (6%) Frame = -2 Query: 1741 YSTMIDGCAKAGKLEEALNLFD-EMKHLGIRLDRVSY-NTLLAIYASLGRFQEAMGICKM 1568 Y+ ++ G+ +A+ FD + G + +R + +++ LG+ + A G+ + Sbjct: 153 YTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFET 212 Query: 1567 MERANIKKDVVTYNALLRNYGKQGIYDEVKKLFRDMKEENLTPNLLTYSTLIDVYSKGGL 1388 V ++AL+ YGK G +DE K+F MK L PNL+TY+ +ID KGG+ Sbjct: 213 ALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGV 272 Query: 1387 -YQEAMEIFRELKQAGLEADVVLYSALIDALCKNGLVESAVSLLDELTREGKPPNVVTYN 1211 ++ +EIF E+ + G++ D + Y++L+ + GL E+A +L +E+ G +V TYN Sbjct: 273 EFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYN 332 Query: 1210 SIIDAFGRSAITKFQEGAASETDELMNESSVCMVLQNA--------NEGKESNDDRVMQL 1055 +++DA + G E+M E +L N K + + L Sbjct: 333 TLLDAVCKG-------GQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNL 385 Query: 1054 FEQL---------AAEKAHPSKEEAKGESQELLCILGLFHKMHELNIKPNVVTFSAILNA 902 + ++ + S G ++ L + +M +K +VVT++A+L+ Sbjct: 386 YNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC---KEMGSSGVKKDVVTYNALLDG 442 Query: 901 CSRCNSFEDASILLEEL---RLFDNQVYGVAHGLLMG--SRENVWIQAQTLFDEVKRMDA 737 + F + + + +E+ R+F N + + L+ S+ +++ +A +F E K+ Sbjct: 443 YGKQGKFNEVTRVFKEMKKDRVFPNL---LTYSTLIDVYSKGSLYEEAMEVFREFKQAGL 499 Query: 736 STASAFYNALTDVLWHFGQRQGAQLVVLEGNRRHVWEN 623 Y+ L + L G A L++ E + + N Sbjct: 500 KADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPN 537 >ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucumis sativus] Length = 868 Score = 878 bits (2269), Expect(2) = 0.0 Identities = 437/613 (71%), Positives = 519/613 (84%), Gaps = 2/613 (0%) Frame = -2 Query: 2080 LKPNLVTYNAVIDAFAKGGVDFSKAVEIFDEMVANGVQPDRITFNSLLAVCSRGGLWEQA 1901 LKPNLVTYNAVIDA KGGV+F + VEIF+EM+ NGVQPDRIT+NSLLAVCSRGGLWE A Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312 Query: 1900 KNLFGEMVNRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDG 1721 +NLF EM++RGIDQD+FTYNTLLDAVCKGGQMDLA+EIM EM K +LPNVVTYSTM DG Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADG 372 Query: 1720 CAKAGKLEEALNLFDEMKHLGIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKD 1541 AKAG+LE+ALNL++EMK LGI LDRVSYNTLL+IYA LGRF++A+ +CK M + +KKD Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKD 432 Query: 1540 VVTYNALLRNYGKQGIYDEVKKLFRDMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFR 1361 VVTYNALL YGKQG ++EV ++F++MK++ + PNLLTYSTLIDVYSKG LY+EAME+FR Sbjct: 433 VVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFR 492 Query: 1360 ELKQAGLEADVVLYSALIDALCKNGLVESAVSLLDELTREGKPPNVVTYNSIIDAFGRSA 1181 E KQAGL+ADVVLYS LI+ALCKNGLV+SAV LLDE+T+EG PNVVTYNSIIDAFGRS Sbjct: 493 EFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRST 552 Query: 1180 ITKFQEGAASETDELMNESSVCMVLQNANEGKESNDD-RVMQLFEQLAAEKAHPSKEEAK 1004 +F ++E +ES M+++ +E + + DD V + ++QL +EK P+K+E Sbjct: 553 TAEFLVDGVGASNERQSESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERL 612 Query: 1003 GESQELLCILGLFHKMHELNIKPNVVTFSAILNACSRCNSFEDASILLEELRLFDNQVYG 824 G+ +E+ IL +F KMHEL IKPNVVTFSAILNACSRC S EDAS+LLEELRLFDNQVYG Sbjct: 613 GK-EEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYG 671 Query: 823 VAHGLLMGSRENVWIQAQTLFDEVKRMDASTASAFYNALTDVLWHFGQRQGAQLVVLEGN 644 VAHGLLMG ENVWIQAQ LFDEVK+MD+STASAFYNALTD+LWHFGQ++GAQLVVLEG Sbjct: 672 VAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGK 731 Query: 643 RRHVWENAWCVSCLDLHLMSSGAAQAMVHAWLLNIRSIVFEGHELPE-LSILTGWGKHSK 467 RR VWE W SCLDLHLMSSGAA+AMVHAWLL I S+VFEGH+LP+ LSILTGWGKHSK Sbjct: 732 RRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGHQLPKLLSILTGWGKHSK 791 Query: 466 VAGDGTLRRVVQALLIRIGAPFHVAKSNIGRFISTGSVVAAWLRESGTLKVLILHDDRTH 287 V GDG LRR ++ALL +GAPF VAK NIGR++STGSVVAAWL+ESGTLK+L+LHDDRTH Sbjct: 792 VVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLKLLVLHDDRTH 851 Query: 286 PETLRLNQHTGMQ 248 P++ ++ + +Q Sbjct: 852 PDSENMDLISKLQ 864 Score = 130 bits (326), Expect(2) = 0.0 Identities = 63/89 (70%), Positives = 79/89 (88%) Frame = -3 Query: 2409 VRCFEFAIQREQKRNEQGKLASSMISVLGRLGRVDLAKRVFETANRDGYGNTVYAFSALI 2230 +RCF+FA+ RE ++NE+GKLAS+MIS LGRLG+V+LAK VFETA +GYGNTV+AFSALI Sbjct: 170 IRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALI 229 Query: 2229 SAYGRSGCCEKALMVFDSMKKSGLKPNLV 2143 SAYG+SG ++A+ VF+SMK SGLKPNLV Sbjct: 230 SAYGKSGYFDEAIKVFESMKVSGLKPNLV 258 Score = 174 bits (440), Expect = 1e-40 Identities = 116/396 (29%), Positives = 197/396 (49%), Gaps = 18/396 (4%) Frame = -2 Query: 2011 KAVEIFD-EMVANGVQPDRITFNS-LLAVCSRGGLWEQAKNLFGEMVNRGIDQDIFTYNT 1838 KA+ FD +V G + +R S +++ R G E AK +F ++ G +F ++ Sbjct: 168 KAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSA 227 Query: 1837 LLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDGCAKAG-KLEEALNLFDEMKHL 1661 L+ A K G D A ++ M V + PN+VTY+ +ID C K G + + + +F+EM Sbjct: 228 LISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRN 287 Query: 1660 GIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKDVVTYNALLRNYGKQGIYDEV 1481 G++ DR++YN+LLA+ + G ++ A + M I +DV TYN LL K G D Sbjct: 288 GVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLA 347 Query: 1480 KKLFRDMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFRELKQAGLEADVVLYSALIDA 1301 ++ +M + + PN++TYST+ D Y+K G ++A+ ++ E+K G+ D V Y+ L+ Sbjct: 348 YEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSI 407 Query: 1300 LCKNGLVESAVSLLDELTREGKPPNVVTYNSIIDAFGRSAITKFQEGAASETDELMNESS 1121 K G E A+ + E+ G +VVTYN+++D +G+ +G +E + E Sbjct: 408 YAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGK-------QGKFNEVTRVFKEMK 460 Query: 1120 VCMVLQNANE--------GKESNDDRVMQLFEQLAAEKAHPSKEEAKGESQELLCILG-- 971 V N K S + M++F + + + E LC G Sbjct: 461 KDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF-KQAGLKADVVLYSELINALCKNGLV 519 Query: 970 -----LFHKMHELNIKPNVVTFSAILNACSRCNSFE 878 L +M + I+PNVVT+++I++A R + E Sbjct: 520 DSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAE 555 Score = 105 bits (263), Expect = 4e-20 Identities = 93/398 (23%), Positives = 181/398 (45%), Gaps = 25/398 (6%) Frame = -2 Query: 1741 YSTMIDGCAKAGKLEEALNLFD-EMKHLGIRLDRVSY-NTLLAIYASLGRFQEAMGICKM 1568 Y+ ++ G+ +A+ FD + G + +R + +++ LG+ + A G+ + Sbjct: 153 YTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFET 212 Query: 1567 MERANIKKDVVTYNALLRNYGKQGIYDEVKKLFRDMKEENLTPNLLTYSTLIDVYSKGGL 1388 V ++AL+ YGK G +DE K+F MK L PNL+TY+ +ID KGG+ Sbjct: 213 ALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGV 272 Query: 1387 -YQEAMEIFRELKQAGLEADVVLYSALIDALCKNGLVESAVSLLDELTREGKPPNVVTYN 1211 ++ +EIF E+ + G++ D + Y++L+ + GL E+A +L +E+ G +V TYN Sbjct: 273 EFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYN 332 Query: 1210 SIIDAFGRSAITKFQEGAASETDELMNESSVCMVLQNA--------NEGKESNDDRVMQL 1055 +++DA + G E+M E +L N K + + L Sbjct: 333 TLLDAVCKG-------GQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNL 385 Query: 1054 FEQL---------AAEKAHPSKEEAKGESQELLCILGLFHKMHELNIKPNVVTFSAILNA 902 + ++ + S G ++ L + +M +K +VVT++A+L+ Sbjct: 386 YNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC---KEMGSSGVKKDVVTYNALLDG 442 Query: 901 CSRCNSFEDASILLEEL---RLFDNQVYGVAHGLLMG--SRENVWIQAQTLFDEVKRMDA 737 + F + + + +E+ R+F N + + L+ S+ +++ +A +F E K+ Sbjct: 443 YGKQGKFNEVTRVFKEMKKDRVFPNL---LTYSTLIDVYSKGSLYEEAMEVFREFKQAGL 499 Query: 736 STASAFYNALTDVLWHFGQRQGAQLVVLEGNRRHVWEN 623 Y+ L + L G A L++ E + + N Sbjct: 500 KADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPN 537 >ref|XP_002301519.1| predicted protein [Populus trichocarpa] gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa] Length = 718 Score = 841 bits (2172), Expect(2) = 0.0 Identities = 425/582 (73%), Positives = 492/582 (84%), Gaps = 2/582 (0%) Frame = -2 Query: 2080 LKPNLVTYNAVIDAFAKGGVDFSKAVEIFDEMVANGVQPDRITFNSLLAVCSRGGLWEQA 1901 LKPNLVTYNAVIDA KGGV+F + +EIFDEM+ NG+QPDRITFNSLLAVCS+GGLWE A Sbjct: 143 LKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAA 202 Query: 1900 KNLFGEMVNRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDG 1721 ++L EMVNRGIDQDIFTYNTLLDAVCKGGQ+D+AFEIMSEM KN+LPNVVTYSTMIDG Sbjct: 203 RSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDG 262 Query: 1720 CAKAGKLEEALNLFDEMKHLGIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKD 1541 AKAG+L++A NLF+EMK LGI LDRVSYNTLL+IYA LGRF+EAM +C+ ME + I+KD Sbjct: 263 YAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKD 322 Query: 1540 VVTYNALLRNYGKQGIYDEVKKLFRDMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFR 1361 VVTYNALL YGKQ YD V+K+F +MK +++PNLLTYSTLIDVYSKGGLY+EAM++FR Sbjct: 323 VVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFR 382 Query: 1360 ELKQAGLEADVVLYSALIDALCKNGLVESAVSLLDELTREGKPPNVVTYNSIIDAFGRSA 1181 E K+AGL+ADVVLYSALIDALCKNGLVESAVSLLDE+T+EG PNVVTYNSIIDAFGR A Sbjct: 383 EFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPA 442 Query: 1180 ITKFQEGAASETDELMNESSVCMVLQNANEG--KESNDDRVMQLFEQLAAEKAHPSKEEA 1007 T+ A +T EL +S ++ A + + D+R++++F QLAAEKA +K Sbjct: 443 TTESVVDDAGQTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSG 502 Query: 1006 KGESQELLCILGLFHKMHELNIKPNVVTFSAILNACSRCNSFEDASILLEELRLFDNQVY 827 QE++CILG+FHKMHEL IKPNVVTFSAILNACSRCNSFE+AS+LLEELRLFDNQVY Sbjct: 503 ---GQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEELRLFDNQVY 559 Query: 826 GVAHGLLMGSRENVWIQAQTLFDEVKRMDASTASAFYNALTDVLWHFGQRQGAQLVVLEG 647 GVAHGLLMG RENVW QAQ+LFDEVK MD+STASAFYNALTD+LWHFGQ++GAQLVVLEG Sbjct: 560 GVAHGLLMGYRENVWEQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 619 Query: 646 NRRHVWENAWCVSCLDLHLMSSGAAQAMVHAWLLNIRSIVFEGHELPELSILTGWGKHSK 467 RR VWEN W SCLDLHLMSSGAA+AMVHAWLLN+R+IVFEGHE+P+L SK Sbjct: 620 KRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNVRAIVFEGHEVPKLL--------SK 671 Query: 466 VAGDGTLRRVVQALLIRIGAPFHVAKSNIGRFISTGSVVAAW 341 V GD TLRR V+ALL+ +GAPF AK N+GR ISTGSVVA+W Sbjct: 672 VVGDSTLRRAVEALLMGMGAPFRSAKCNLGRLISTGSVVASW 713 Score = 130 bits (328), Expect(2) = 0.0 Identities = 62/87 (71%), Positives = 76/87 (87%) Frame = -3 Query: 2403 CFEFAIQREQKRNEQGKLASSMISVLGRLGRVDLAKRVFETANRDGYGNTVYAFSALISA 2224 CFEFA++RE+K+NEQGKLAS+MIS LGRLG+V++AK VF+ A +GYGNTVYAFSA+ISA Sbjct: 62 CFEFAVKRERKKNEQGKLASAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISA 121 Query: 2223 YGRSGCCEKALMVFDSMKKSGLKPNLV 2143 YGRSG C +A+ +F SMK GLKPNLV Sbjct: 122 YGRSGYCNEAIKIFYSMKDYGLKPNLV 148 Score = 102 bits (254), Expect = 5e-19 Identities = 84/361 (23%), Positives = 162/361 (44%), Gaps = 3/361 (0%) Frame = -2 Query: 1633 NTLLAIYASLGRFQEAMGICKMMERANIKKDVVTYNALLRNYGKQGIYDEVKKLFRDMKE 1454 + +++ LG+ + A + K V ++A++ YG+ G +E K+F MK+ Sbjct: 81 SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140 Query: 1453 ENLTPNLLTYSTLIDVYSKGGL-YQEAMEIFRELKQAGLEADVVLYSALIDALCKNGLVE 1277 L PNL+TY+ +ID KGG+ ++ +EIF E+ + G++ D + +++L+ K GL E Sbjct: 141 YGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWE 200 Query: 1276 SAVSLLDELTREGKPPNVVTYNSIIDAFGRSAITKFQEGAASETDELMNESSVCMVLQNA 1097 +A SL E+ G ++ TYN+++DA + G E+M+E +L N Sbjct: 201 AARSLSCEMVNRGIDQDIFTYNTLLDAVCKG-------GQLDMAFEIMSEMPAKNILPNV 253 Query: 1096 NEGKESNDDRVMQLFEQLAAEKAHPSKEEAKGESQELLCILGLFHKMHELNIKPNVVTFS 917 + + + ++ L LF++M L I + V+++ Sbjct: 254 ---------------------VTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYN 292 Query: 916 AILNACSRCNSFEDASILLEELRLFDNQVYGVAHGLLMG--SRENVWIQAQTLFDEVKRM 743 +L+ ++ FE+A + E+ + V + L+G ++ + + +F+E+K Sbjct: 293 TLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKAR 352 Query: 742 DASTASAFYNALTDVLWHFGQRQGAQLVVLEGNRRHVWENAWCVSCLDLHLMSSGAAQAM 563 S Y+ L DV G + A V E + + + S L L +G ++ Sbjct: 353 HVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESA 412 Query: 562 V 560 V Sbjct: 413 V 413