BLASTX nr result

ID: Coptis24_contig00002090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002090
         (1332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Viti...   262   2e-67
emb|CAN64003.1| hypothetical protein VITISV_037635 [Vitis vinifera]   256   1e-65
emb|CBI38005.3| unnamed protein product [Vitis vinifera]              223   7e-56
ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like ...   223   9e-56
gb|ADL36693.1| GATA domain class transcription factor [Malus x d...   213   7e-53

>ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Vitis vinifera]
          Length = 338

 Score =  262 bits (669), Expect = 2e-67
 Identities = 160/338 (47%), Positives = 191/338 (56%), Gaps = 9/338 (2%)
 Frame = +1

Query: 19   MDCVETKALKTSFSEMFALKTTTTTQQIFNEDLWCGNGANGVAGDDLFVEGLLNFSNXXX 198
            M+CVE KALK+S      L    T Q    +D+  GNG +GV+GDD  ++ LL+F+N   
Sbjct: 1    MECVE-KALKSSVVRP-ELAFKLTQQPACMDDMCMGNGQSGVSGDDFSIDDLLDFTNGGI 58

Query: 199  XXXXXXXXXXXXXXXXXXXXXXXXXXHD---LKTCSDALSIKNEFGSVPESELTVPADDV 369
                                       +       +   S+K+EF SVP +ELTVPADD+
Sbjct: 59   GEGLFQEEDEEDEDKGCGSLSPRGELTENDNSNLTTTTFSVKDEFPSVPATELTVPADDL 118

Query: 370  ANLEWLSHFVEDSFSEFSLQHLVGKTELNPQTKNDKGSEMFIETPGLGPVGVATSVPAKA 549
            A+LEWLSHFVEDSFSE+S     G      Q + +   E   ETP      + T  PAKA
Sbjct: 119  ADLEWLSHFVEDSFSEYSAPFPHGTLTEKAQNQTENPPEP--ETPLQIKSCLKTPFPAKA 176

Query: 550  RSKRSRTGGRVWSLGSLPLTDXXXXXXXXXXXXXXXXXCLIFNNTGQNLDMFSFMGXXXX 729
            RSKR+RTGGRVWS+GS  LT+                  LI+ NT QN++ F        
Sbjct: 177  RSKRARTGGRVWSMGSPSLTESSSSSSSSSSSSLSSPW-LIYPNTCQNVESFHSAVKPPA 235

Query: 730  XXXXXXXXXEAQ------QRRCSHCGVNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEY 891
                     EA         RCSHCGV KTPQWRTGPLGAKTLCNACGVRYKSGRLLPEY
Sbjct: 236  KKHKKRLDPEASGSAQPTPHRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEY 295

Query: 892  RPAISPTFSSDVHSNNHRKVLEMRRKKEVTQPELAF*P 1005
            RPA SPTFSS++HSN+HRKVLEMRRKKEVT+PE    P
Sbjct: 296  RPACSPTFSSEIHSNHHRKVLEMRRKKEVTRPESGLAP 333


>emb|CAN64003.1| hypothetical protein VITISV_037635 [Vitis vinifera]
          Length = 338

 Score =  256 bits (653), Expect = 1e-65
 Identities = 156/332 (46%), Positives = 188/332 (56%), Gaps = 9/332 (2%)
 Frame = +1

Query: 19  MDCVETKALKTSFSEMFALKTTTTTQQIFNEDLWCGNGANGVAGDDLFVEGLLNFSNXXX 198
           M+CVE KALK+S      L    T Q    +D+  GNG +GV+GDD  ++ LL+F+N   
Sbjct: 1   MECVE-KALKSSVVRP-ELAFKLTQQPACXDDICMGNGQSGVSGDDFSIDDLLDFTNGGI 58

Query: 199 XXXXXXXXXXXXXXXXXXXXXXXXXXHD---LKTCSDALSIKNEFGSVPESELTVPADDV 369
                                      +       +   S+K+EF SVP +ELTVPADD+
Sbjct: 59  GEGLFQEEDEEDEDKGCGSLSPRRELTENDNSNLTTTTFSVKDEFPSVPATELTVPADDL 118

Query: 370 ANLEWLSHFVEDSFSEFSLQHLVGKTELNPQTKNDKGSEMFIETPGLGPVGVATSVPAKA 549
           A+LEWLSHFVEDSFSE+S     G      Q + +   E   ETP      + T  PAKA
Sbjct: 119 ADLEWLSHFVEDSFSEYSAPFPPGTLTEKAQNQTENPPEP--ETPLQIKSCLKTPFPAKA 176

Query: 550 RSKRSRTGGRVWSLGSLPLTDXXXXXXXXXXXXXXXXXCLIFNNTGQNLDMFSFMGXXXX 729
           RSKR+RTGGRVWS+GS  LT+                  LI+ NT QN++ F        
Sbjct: 177 RSKRARTGGRVWSMGSPSLTESSSSSSSSSSSSLSSPW-LIYPNTCQNVESFHSAVKPPA 235

Query: 730 XXXXXXXXXEAQ------QRRCSHCGVNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEY 891
                    EA         RCSHCGV KT QWRTGPLGAKTLCNACGVR+KSGRLLPEY
Sbjct: 236 KKHKKRLDPEASGSAQXTPHRCSHCGVQKTXQWRTGPLGAKTLCNACGVRFKSGRLLPEY 295

Query: 892 RPAISPTFSSDVHSNNHRKVLEMRRKKEVTQP 987
           RPA SPTFSS++HSN+HRKVLEMRRKKEVT+P
Sbjct: 296 RPACSPTFSSEIHSNHHRKVLEMRRKKEVTRP 327


>emb|CBI38005.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score =  223 bits (569), Expect = 7e-56
 Identities = 139/326 (42%), Positives = 173/326 (53%), Gaps = 5/326 (1%)
 Frame = +1

Query: 25  CVETKALKTSFSEMFALKTTTTTQQIFNEDLWCGNGANGVAGDDLFVEGLLNFSNXXXXX 204
           C+E++ALK S     A+KTT    Q+  +D+ CG G NGV+G+D  V+ L +FSN     
Sbjct: 62  CIESRALKESLRREAAMKTTP---QVLYDDVLCGAGVNGVSGEDFSVDDLFDFSNGGLGV 118

Query: 205 XXXXXXXXXXXXXXXXXXXXXXXXHDLKTCSDALSIKNEFGSVPESELTVPADDVANLEW 384
                                    D  + S + S   +F S+    L VPADD+ +LEW
Sbjct: 119 GVD----------------------DDNSNSSSFSGTGDFESLSAGGLAVPADDLEHLEW 156

Query: 385 LSHFVEDSF-SEFSLQHLVGKTELNPQTKNDKGSEMFIETPG---LGPVGVATSVPAKAR 552
           LSHFV+DS  SE SL        L P    +  S+   E P    L      T +PAK R
Sbjct: 157 LSHFVDDSSASELSL--------LCPAVTGNSPSKRCEEEPRPALLRTPLFPTPLPAKPR 208

Query: 553 SKRSRTGGRVWSLGSLPLTDXXXXXXXXXXXXXXXXXCLIFNNTGQNLDMFSFMGXXXXX 732
           SKR R+ GR W+ GS                      CLIF NT  N++ F  +      
Sbjct: 209 SKRHRSSGRAWAFGS-----HSPSSSPSSSSSSSSTSCLIFANTVHNMESFYSLEKPPAK 263

Query: 733 XXXXXXXXEAQ-QRRCSHCGVNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAISP 909
                   ++Q QRRCSHC V KTPQWRTGPLG KTLCNACGVR+KSGRL PEYRPA SP
Sbjct: 264 KPKKSPSADSQPQRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSP 323

Query: 910 TFSSDVHSNNHRKVLEMRRKKEVTQP 987
           TFS ++HSN+HRKVLE+RRKKE  +P
Sbjct: 324 TFSVEIHSNSHRKVLEIRRKKETAEP 349


>ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like [Vitis vinifera]
          Length = 317

 Score =  223 bits (568), Expect = 9e-56
 Identities = 139/327 (42%), Positives = 173/327 (52%), Gaps = 6/327 (1%)
 Frame = +1

Query: 25  CVETKALKTSFSEMFALKTTTTTQQIFNEDLWCGNGANGVAGDDLFVEGLLNFSNXXXXX 204
           C+E++ALK S     A+KTT    Q+  +D+ CG G NGV+G+D  V+ L +FSN     
Sbjct: 4   CIESRALKESLRREAAMKTTP---QVLYDDVLCGAGVNGVSGEDFSVDDLFDFSNGGLGV 60

Query: 205 XXXXXXXXXXXXXXXXXXXXXXXX-HDLKTCSDALSIKNEFGSVPESELTVPADDVANLE 381
                                     D  + S + S   +F S+    L VPADD+ +LE
Sbjct: 61  GFEGEEEEEEEEEKDSFSWSSLERVDDDNSNSSSFSGTGDFESLSAGGLAVPADDLEHLE 120

Query: 382 WLSHFVEDSF-SEFSLQHLVGKTELNPQTKNDKGSEMFIETPG---LGPVGVATSVPAKA 549
           WLSHFV+DS  SE SL        L P    +  S+   E P    L      T +PAK 
Sbjct: 121 WLSHFVDDSSASELSL--------LCPAVTGNSPSKRCEEEPRPALLRTPLFPTPLPAKP 172

Query: 550 RSKRSRTGGRVWSLGSLPLTDXXXXXXXXXXXXXXXXXCLIFNNTGQNLDMFSFMGXXXX 729
           RSKR R+ GR W+ GS                      CLIF NT  N++ F  +     
Sbjct: 173 RSKRHRSSGRAWAFGS-----HSPSSSPSSSSSSSSTSCLIFANTVHNMESFYSLEKPPA 227

Query: 730 XXXXXXXXXEAQ-QRRCSHCGVNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAIS 906
                    ++Q QRRCSHC V KTPQWRTGPLG KTLCNACGVR+KSGRL PEYRPA S
Sbjct: 228 KKPKKSPSADSQPQRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACS 287

Query: 907 PTFSSDVHSNNHRKVLEMRRKKEVTQP 987
           PTFS ++HSN+HRKVLE+RRKKE  +P
Sbjct: 288 PTFSVEIHSNSHRKVLEIRRKKETAEP 314


>gb|ADL36693.1| GATA domain class transcription factor [Malus x domestica]
          Length = 323

 Score =  213 bits (543), Expect = 7e-53
 Identities = 133/330 (40%), Positives = 168/330 (50%), Gaps = 8/330 (2%)
 Frame = +1

Query: 25  CVETKALKTSFSEMFALKTTTTTQQIFNEDLWCGNGANGVAGDDLFVEGLLNFSNXXXXX 204
           C+E +ALK+S     A+K+T   Q +  E+LWC  G +GV  +D  V+ LL+ SN     
Sbjct: 4   CMEARALKSSLRRELAVKST---QHVLLEELWCATGISGVPSEDFSVDDLLDLSNDEFGN 60

Query: 205 XXXXXXXXXXXXXXXXXXXXXXXXHDLKTCSDALSIKNEFGSVPESELTVPADDVANLEW 384
                                    D +T + + S+  +  S   ++L VP DD+A LEW
Sbjct: 61  GSVEEEGEERDSVSV----------DDETSNSSNSVLADSDSGLATQLVVPDDDLAELEW 110

Query: 385 LSHFVEDSFSEFSLQHLVGKTELNPQTKNDKGSEMFIETPGLGPVGVATSVPAKARSKRS 564
           +SHFV+DS  + SL H +G  +  P+      SE   +   L        VP K R+KR 
Sbjct: 111 VSHFVDDSLPDLSLLHTIGVQK--PEALLANRSESEPKPAQLRASLFPFEVPVKPRTKRC 168

Query: 565 RTGGRVWSLGSLPLTDXXXXXXXXXXXXXXXXXCLIFNNTGQNLDMFSFMGXXXXXXXXX 744
           R   R WSL S   +                  CLIFN       M  F+G         
Sbjct: 169 RLASRDWSLSSS--SSPSSPSSSSGSGLSFSTPCLIFNPVQS---MHVFVGEPAAKKQKK 223

Query: 745 XXXXEAQ--------QRRCSHCGVNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPA 900
               +          QRRCSHC V KTPQWRTGPLG KTLCNACGVR+KSGRL PEYRPA
Sbjct: 224 KPAVQTGEGSIGGQFQRRCSHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPA 283

Query: 901 ISPTFSSDVHSNNHRKVLEMRRKKEVTQPE 990
            SPTFS DVHSN+HRKVLEMR++KEV +PE
Sbjct: 284 CSPTFSGDVHSNSHRKVLEMRKRKEVGEPE 313


Top