BLASTX nr result

ID: Coptis24_contig00002047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002047
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Viti...   338   1e-90
gb|ABK94586.1| unknown [Populus trichocarpa]                          337   3e-90
ref|XP_002298780.1| predicted protein [Populus trichocarpa] gi|2...   336   4e-90
ref|XP_004142897.1| PREDICTED: pollen-specific protein SF3-like ...   336   5e-90
gb|ABK93559.1| unknown [Populus trichocarpa]                          333   3e-89

>ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
           gi|147785329|emb|CAN72849.1| hypothetical protein
           VITISV_013939 [Vitis vinifera]
           gi|302142193|emb|CBI19396.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  338 bits (866), Expect = 1e-90
 Identities = 154/195 (78%), Positives = 171/195 (87%), Gaps = 3/195 (1%)
 Frame = -2

Query: 785 MAFAGTTQKCKACEKTVYLVDQLTADNRVYHKACFRCHHCRGTLKLSNYNSFEGVLYCRP 606
           MAFAGTTQKC AC+KTVYLVD+LTADNRVYHKACFRCHHC+GTLKL NYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60

Query: 605 HFDQTFKRTGSLDKSFDGTPKIVKPEKPVDTENPNINRVSNRFVGTREKCLLCKKTVYPI 426
           HFDQ FKRTGSLDKSF+GTPKIVKPEKP+D+E P  N+VS+ F GTR+KC+ CK TVYP 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDSEKPIANKVSSMFAGTRDKCVGCKNTVYPT 120

Query: 425 EKVAVDGSLYHRSCFKCTHGGCTISPSNYIAHEGKLYCRHHHIQLFKEKGNYSQLEGEQD 246
           EKV V+G+ YH+SCFKCTHGGCTISPSNYIAHEG+LYC+HHH QL KEKGN SQLEG+ +
Sbjct: 121 EKVTVNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGDHE 180

Query: 245 K---TEKVATNEVAA 210
           K    EKV   EVAA
Sbjct: 181 KDTANEKVNGREVAA 195



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 37/100 (37%), Positives = 54/100 (54%)
 Frame = -2

Query: 794 KGAMAFAGTTQKCKACEKTVYLVDQLTADNRVYHKACFRCHHCRGTLKLSNYNSFEGVLY 615
           K +  FAGT  KC  C+ TVY  +++T +   YHK+CF+C H   T+  SNY + EG LY
Sbjct: 98  KVSSMFAGTRDKCVGCKNTVYPTEKVTVNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLY 157

Query: 614 CRPHFDQTFKRTGSLDKSFDGTPKIVKPEKPVDTENPNIN 495
           C+ H  Q  K  G+L +        ++ +   DT N  +N
Sbjct: 158 CKHHHTQLIKEKGNLSQ--------LEGDHEKDTANEKVN 189


>gb|ABK94586.1| unknown [Populus trichocarpa]
          Length = 196

 Score =  337 bits (863), Expect = 3e-90
 Identities = 156/194 (80%), Positives = 172/194 (88%), Gaps = 3/194 (1%)
 Frame = -2

Query: 782 AFAGTTQKCKACEKTVYLVDQLTADNRVYHKACFRCHHCRGTLKLSNYNSFEGVLYCRPH 603
           AFAGT QKC AC+KTVYLVD+LTADNR+YHKACFRCHHCRGTLKLSNY+SFEGVLYCRPH
Sbjct: 3   AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 62

Query: 602 FDQTFKRTGSLDKSFDGTPKIVKPEKPVDTENPNINRVSNRFVGTREKCLLCKKTVYPIE 423
           +DQ FKRTGSLDKSF+GTPKIVKPEKPVD  N N ++VSN F GTREKC+ C KTVYPIE
Sbjct: 63  YDQLFKRTGSLDKSFEGTPKIVKPEKPVD--NENASKVSNLFAGTREKCVGCNKTVYPIE 120

Query: 422 KVAVDGSLYHRSCFKCTHGGCTISPSNYIAHEGKLYCRHHHIQLFKEKGNYSQLEGEQDK 243
           KV V+G+ YHRSCFKCTHGGCTISPSNYIAHEGKLYC+HHHIQLFKEKGNYSQLE E++K
Sbjct: 121 KVTVNGTQYHRSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLENEREK 180

Query: 242 ---TEKVATNEVAA 210
              T  +   E+AA
Sbjct: 181 NPVTVNITAVEIAA 194


>ref|XP_002298780.1| predicted protein [Populus trichocarpa] gi|222846038|gb|EEE83585.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  336 bits (862), Expect = 4e-90
 Identities = 156/194 (80%), Positives = 172/194 (88%), Gaps = 3/194 (1%)
 Frame = -2

Query: 782 AFAGTTQKCKACEKTVYLVDQLTADNRVYHKACFRCHHCRGTLKLSNYNSFEGVLYCRPH 603
           AFAGT QKC AC+KTVYLVD+LTADNR+YHKACFRCHHCRGTLKLSNY+SFEGVLYCRPH
Sbjct: 3   AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 62

Query: 602 FDQTFKRTGSLDKSFDGTPKIVKPEKPVDTENPNINRVSNRFVGTREKCLLCKKTVYPIE 423
           +DQ FKRTGSLDKSF+GTPKIVKPEKPVD  N N ++VSN F GTREKC+ C KTVYPIE
Sbjct: 63  YDQLFKRTGSLDKSFEGTPKIVKPEKPVD--NENASKVSNLFAGTREKCVGCNKTVYPIE 120

Query: 422 KVAVDGSLYHRSCFKCTHGGCTISPSNYIAHEGKLYCRHHHIQLFKEKGNYSQLEGEQDK 243
           KV V+G+ YHRSCFKCTHGGCTISPSNYIAHEGKLYC+HHHIQLFKEKGNYSQLE E++K
Sbjct: 121 KVTVNGTPYHRSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLENEREK 180

Query: 242 ---TEKVATNEVAA 210
              T  +   E+AA
Sbjct: 181 NPVTVSITAVEIAA 194


>ref|XP_004142897.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus]
           gi|449482725|ref|XP_004156385.1| PREDICTED:
           pollen-specific protein SF3-like [Cucumis sativus]
          Length = 198

 Score =  336 bits (861), Expect = 5e-90
 Identities = 152/196 (77%), Positives = 172/196 (87%), Gaps = 3/196 (1%)
 Frame = -2

Query: 785 MAFAGTTQKCKACEKTVYLVDQLTADNRVYHKACFRCHHCRGTLKLSNYNSFEGVLYCRP 606
           MAFAGTTQKC ACEKTVYLVD+LTADNR+YHKACFRCHHC+GTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 605 HFDQTFKRTGSLDKSFDGTPKIVKPEKPVDTENPNINRVSNRFVGTREKCLLCKKTVYPI 426
           HFDQ FKRTGSLDKSF+GTPKIVKPEKP+D+E P  N+V+++F GTR+KCL C  TVYP 
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120

Query: 425 EKVAVDGSLYHRSCFKCTHGGCTISPSNYIAHEGKLYCRHHHIQLFKEKGNYSQLEGEQD 246
           EKV V+G+ YH+SCFKC HGGCTISPSNYIAHEG+LYC+HHHIQL KEKGN SQLEG+ +
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 245 K---TEKVATNEVAAA 207
           K    EK+   EV A+
Sbjct: 181 KITAKEKINGGEVVAS 196



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 37/90 (41%), Positives = 49/90 (54%)
 Frame = -2

Query: 794 KGAMAFAGTTQKCKACEKTVYLVDQLTADNRVYHKACFRCHHCRGTLKLSNYNSFEGVLY 615
           K A  F GT  KC  C+ TVY  +++T +   YHK+CF+C H   T+  SNY + EG LY
Sbjct: 98  KVASKFGGTRDKCLGCDNTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLY 157

Query: 614 CRPHFDQTFKRTGSLDKSFDGTPKIVKPEK 525
           C+ H  Q  K  G+L +      KI   EK
Sbjct: 158 CKHHHIQLIKEKGNLSQLEGDHEKITAKEK 187


>gb|ABK93559.1| unknown [Populus trichocarpa]
          Length = 195

 Score =  333 bits (855), Expect = 3e-89
 Identities = 155/192 (80%), Positives = 169/192 (88%)
 Frame = -2

Query: 782 AFAGTTQKCKACEKTVYLVDQLTADNRVYHKACFRCHHCRGTLKLSNYNSFEGVLYCRPH 603
           AFAGT QKC AC+KTVYLVD+LTADNRV+HKACFRCHHCRGTLKLSNY SFEGVLYCRPH
Sbjct: 3   AFAGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 62

Query: 602 FDQTFKRTGSLDKSFDGTPKIVKPEKPVDTENPNINRVSNRFVGTREKCLLCKKTVYPIE 423
           +DQ FKRTGSLDKSF+GTPKIVKPEKPVD  N N ++VSN F GTREKC+ C KTVYPIE
Sbjct: 63  YDQLFKRTGSLDKSFEGTPKIVKPEKPVD--NENASKVSNLFAGTREKCVGCDKTVYPIE 120

Query: 422 KVAVDGSLYHRSCFKCTHGGCTISPSNYIAHEGKLYCRHHHIQLFKEKGNYSQLEGEQDK 243
           KV V+G+ YHRSCFKCTHGGCTISPSNYIAHEGKLYC+HHHIQLFKEKGNYSQLE E++K
Sbjct: 121 KVTVNGTPYHRSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLENEREK 180

Query: 242 TEKVATNEVAAA 207
              V+   V  A
Sbjct: 181 NPVVSITAVEIA 192


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