BLASTX nr result

ID: Coptis24_contig00002044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002044
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containin...    69   5e-10
ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containin...    69   5e-10
emb|CAN62489.1| hypothetical protein VITISV_035536 [Vitis vinifera]    69   5e-10
ref|XP_003546875.1| PREDICTED: SURP and G-patch domain-containin...    68   7e-10
gb|ACU24233.1| unknown [Glycine max]                                   68   7e-10

>ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like isoform 1 [Vitis vinifera]
          Length = 459

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/104 (43%), Positives = 58/104 (55%)
 Frame = +2

Query: 5   EDPHPQPIITHSSGTPKQTSVITKLSFESKPIDTRKATPVSSSGKLAFSLKQKSKLVAVP 184
           E+P  Q ++  ++ TP   S+ +K +  SK   TRK    + +GKLAFSLKQKSKLV  P
Sbjct: 53  EEPK-QRMVVPATSTPN--SIPSKTNNVSKTNGTRKTPLAAPNGKLAFSLKQKSKLVPPP 109

Query: 185 VKLXXXXXXXXXXXXXXPCDGPVKRQKLGQHEASTLPSDHGDVA 316
           VKL                D P+KRQKLGQ ++S  PS   DVA
Sbjct: 110 VKLGADEDEEETDAGNLSSDAPMKRQKLGQKDSSEHPSPQVDVA 153


>ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like isoform 2 [Vitis vinifera]
           gi|297736220|emb|CBI24858.3| unnamed protein product
           [Vitis vinifera]
          Length = 444

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/104 (43%), Positives = 58/104 (55%)
 Frame = +2

Query: 5   EDPHPQPIITHSSGTPKQTSVITKLSFESKPIDTRKATPVSSSGKLAFSLKQKSKLVAVP 184
           E+P  Q ++  ++ TP   S+ +K +  SK   TRK    + +GKLAFSLKQKSKLV  P
Sbjct: 38  EEPK-QRMVVPATSTPN--SIPSKTNNVSKTNGTRKTPLAAPNGKLAFSLKQKSKLVPPP 94

Query: 185 VKLXXXXXXXXXXXXXXPCDGPVKRQKLGQHEASTLPSDHGDVA 316
           VKL                D P+KRQKLGQ ++S  PS   DVA
Sbjct: 95  VKLGADEDEEETDAGNLSSDAPMKRQKLGQKDSSEHPSPQVDVA 138


>emb|CAN62489.1| hypothetical protein VITISV_035536 [Vitis vinifera]
          Length = 473

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/104 (43%), Positives = 58/104 (55%)
 Frame = +2

Query: 5   EDPHPQPIITHSSGTPKQTSVITKLSFESKPIDTRKATPVSSSGKLAFSLKQKSKLVAVP 184
           E+P  Q ++  ++ TP   S+ +K +  SK   TRK    + +GKLAFSLKQKSKLV  P
Sbjct: 38  EEPK-QRMVVPATSTPN--SIPSKTNNVSKTNGTRKTPLAAPNGKLAFSLKQKSKLVPPP 94

Query: 185 VKLXXXXXXXXXXXXXXPCDGPVKRQKLGQHEASTLPSDHGDVA 316
           VKL                D P+KRQKLGQ ++S  PS   DVA
Sbjct: 95  VKLGADEDEEETDAGNLSSDAPMKRQKLGQKDSSEHPSPQVDVA 138


>ref|XP_003546875.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like [Glycine max]
          Length = 436

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 47/104 (45%), Positives = 52/104 (50%)
 Frame = +2

Query: 5   EDPHPQPIITHSSGTPKQTSVITKLSFESKPIDTRKATPVSSSGKLAFSLKQKSKLVAVP 184
           ED  P  +I   SG+       TK   + K  DTRK +   SSGKLAFSLKQKSKLV  P
Sbjct: 36  EDSKPIKVI---SGSLSPNPSFTKTPVDLKVNDTRKISQGGSSGKLAFSLKQKSKLVPPP 92

Query: 185 VKLXXXXXXXXXXXXXXPCDGPVKRQKLGQHEASTLPSDHGDVA 316
           VKL                D P+KRQKLGQ E     S   DVA
Sbjct: 93  VKLSADEDEEETEAGYVSNDAPLKRQKLGQEEGIDQSSRQLDVA 136


>gb|ACU24233.1| unknown [Glycine max]
          Length = 433

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 47/104 (45%), Positives = 52/104 (50%)
 Frame = +2

Query: 5   EDPHPQPIITHSSGTPKQTSVITKLSFESKPIDTRKATPVSSSGKLAFSLKQKSKLVAVP 184
           ED  P  +I   SG+       TK   + K  DTRK +   SSGKLAFSLKQKSKLV  P
Sbjct: 36  EDSKPIKVI---SGSLSPNPSFTKTPVDLKVNDTRKISQGGSSGKLAFSLKQKSKLVPPP 92

Query: 185 VKLXXXXXXXXXXXXXXPCDGPVKRQKLGQHEASTLPSDHGDVA 316
           VKL                D P+KRQKLGQ E     S   DVA
Sbjct: 93  VKLSADEDEEETEAGYVSNDAPLKRQKLGQEEGIDQSSRQLDVA 136