BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002042
         (6245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...  2217   0.0  
emb|CBI29966.3| unnamed protein product [Vitis vinifera]             2193   0.0  
ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]    1975   0.0  
ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sat...  1897   0.0  
ref|NP_187803.4| RNA binding protein [Arabidopsis thaliana] gi|3...  1884   0.0  

>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score = 2217 bits (5744), Expect = 0.0
 Identities = 1149/1932 (59%), Positives = 1412/1932 (73%), Gaps = 15/1932 (0%)
 Frame = +3

Query: 66   MAKPQQNKQPMKTKPN---KNPSLKPQXXXXXXRKQSNDS--SSLKPMQIEDDVPDFPRG 230
            MA P +   P K+K +   +  S KP       R + N++  S    +Q+EDDVPDFPRG
Sbjct: 1    MAPPSKKSHPKKSKRDDKLRGASKKP----FKPRMRQNEAVPSESLALQMEDDVPDFPRG 56

Query: 231  GGSLLSRKXXXXXXXXXXXXXXKEQXXXXXXXXXXXXXXXXYLEEDDFGSLFGEGVTGKL 410
            GGSLLSR+                +                Y  EDD GSLFG+G+TGKL
Sbjct: 57   GGSLLSRQEHDAIRAEVDAEFEAGERKTKKKNKNAKKTKKNYALEDDMGSLFGDGITGKL 116

Query: 411  PKYANKITLKNVSAGMKLWGVISEVNEKDLVVNLPGGLRGLIRASEASDLIAENEIKDTE 590
            P++ANKITLKN+S GMKLWGV++EVNEKDL ++LPGGLRGL+RASEA D +  NEIKD E
Sbjct: 117  PRFANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKDAE 176

Query: 591  HNFLSSNFHXXXXXXXXXXXXXXXXXXTKGKMKIWXXXXXXXXXXXXXXDAVQEGMVLTA 770
              FL   FH                   KGK +IW              DA+QEGMVLTA
Sbjct: 177  GIFLPRIFHIGQLVSCVVLQLDDDKKE-KGKRRIWLSLRLSLLHKGFTLDALQEGMVLTA 235

Query: 771  YVKSIEDHGYILQFGLSSFSGFLPRRNKDGCEMKVNAGQLLQGVVRNIDNARRVVHMSSD 950
            YVKSIEDHGYIL FGL SF+GFLP+ ++    +++N GQ+LQGV+R+ID A +VV++SSD
Sbjct: 236  YVKSIEDHGYILHFGLPSFTGFLPKSSQADQNIEINTGQILQGVIRSIDKAHKVVYLSSD 295

Query: 951  PDIVSKCVTKDVKGISIDLLVPGMMVNARVQSTLENGIMLSFLTYFTGTVDIFHLENTCP 1130
            PD +SKCVTKD+KGISIDLL+PGMMVNARVQST ENG+MLSFLTYFTGTVDIFHL+ T P
Sbjct: 296  PDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFP 355

Query: 1131 STAWKEEYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPSHVQIGEIYDRSRIVRV 1310
            S+ WK++YNQ+KK+NARILFIDPSTRAVGLT+NPHLV+NKAPP  V+ G+IYD S+++RV
Sbjct: 356  SSNWKDDYNQNKKVNARILFIDPSTRAVGLTLNPHLVNNKAPPCPVKTGDIYDHSKVIRV 415

Query: 1311 DRGMGLLLDIPSAPVSTPGYVSIFDVSDXXXXXXXXXXXXGNHVRVRIVGFRHLEGQAMG 1490
            DRG+GLLL++PS P STP YV+  +               G+HVRVRI+GFR+LEG AMG
Sbjct: 416  DRGLGLLLEVPSTPASTPTYVTYKE---------------GSHVRVRILGFRNLEGLAMG 460

Query: 1491 IMKASAFEGSVFTHSDVKPGMVVKGKVISVENFGAFVQLYSGVKALCPLPHMSELDIVKP 1670
             +KASAFEGSVFTHSDVKPGMVVK KVI+V++FGA VQ  SGVKALCPL HMSE DIVKP
Sbjct: 461  TLKASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKP 520

Query: 1671 RKKFKVGAELVFRVLGCKSKRITVTHXXXXXXXXXXXXXXYADAAEGLVTHGWITKIEKH 1850
            RKKFKVGAEL+FRVLGCKSKRITVTH              Y DA EGL+THGWITKIEKH
Sbjct: 521  RKKFKVGAELIFRVLGCKSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKH 580

Query: 1851 GCFVRFYNGVQGFASRTELGLEPGVEPSLMYHVGQVVKCRVVSAIPDSRRINLSFIISPA 2030
            GCF+RFYNGVQGFA  +ELGLEPG   SLMYHVGQVVKCRV  ++P SRRINL+      
Sbjct: 581  GCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRVKGSVPASRRINLN------ 634

Query: 2031 RGAVEDIIKLGAVVSAIVERMTPKAVIVKVNANSYIKGTILNEHLADQQGQATLMRSLLK 2210
                 D++KLG+VV  +V+R+TP A+IV V+A  Y+KGTI  EHLAD QG A LM+S LK
Sbjct: 635  -----DMVKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTLK 689

Query: 2211 PGYEFDQLLVLDFEGNSVVLSAKHSLINSAKQLPVDVAQFHPHLLTHGYICNVIDSGCFV 2390
            PGYEFDQLLVLD EGN+ +LSAK+SLINSA+QLP+D+ Q HP+ + HGYICN+I++GCFV
Sbjct: 690  PGYEFDQLLVLDVEGNNFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNIIETGCFV 749

Query: 2391 RFLGRVTAFSPKHKATDDQIADTSEAFYIGQSVRGEVLNVDSETGRITLSLKQSSCFSTD 2570
            RFLGR+T FSP++K  DDQ A  SEAF+IGQSVR  +L+V+SETGRITLSLKQS C STD
Sbjct: 750  RFLGRLTGFSPRNKVMDDQRAVPSEAFFIGQSVRSNILDVNSETGRITLSLKQSCCSSTD 809

Query: 2571 ASFIQAYFLWEEKIAKLQLSDSEKSDYKWLESLSVGNVVEGKVHEAKEFGVVLSFKEHND 2750
            ASFIQ YFL EEKIAKLQLSDSE S+ KW E  ++G V+EGK+H+AK+FGVV+SF+++ND
Sbjct: 810  ASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNIGTVIEGKIHDAKDFGVVISFEKYND 869

Query: 2751 VFGFISHYQLGGTTVETGSIVQAVVLDIAKGERLVDLSLKPDLVSRFKDQLKYPTQKKSQ 2930
            VFGFI+HYQL   T E GS VQAVVLD+AK ERLVDLSLKP+ + R K+     +Q   +
Sbjct: 870  VFGFITHYQL---TAERGSTVQAVVLDVAKTERLVDLSLKPEFLDRHKED-SSNSQAGKK 925

Query: 2931 KRKKDLSLNLEVHQTVNAIVEIVKENYLVLSLPGFSHAIGYASIADYNTQKLPHRQFVNG 3110
            KR+++    L+ HQTVNAIVEIVKENYLVLSLP +++AIGYAS++DYNTQK   +QF++G
Sbjct: 926  KRRREAYKELQPHQTVNAIVEIVKENYLVLSLPEYNYAIGYASVSDYNTQKFAQKQFLHG 985

Query: 3111 QSVVATVGDLPAPSTTGRXXXXXXXXXXXXXXXXXXXXXXXXXYNVGSFVEAEITEIKPL 3290
            QSV+A+V  LP+PST GR                         YNVGS V+AEITEIKPL
Sbjct: 986  QSVIASVMALPSPSTVGRLLLVLKSVSEATETSSSKRAKKKSSYNVGSLVQAEITEIKPL 1045

Query: 3291 EMRLKFGFGFRGRVHITEANDDQTVEDPLTKFKVGQTLTARVVEKVNQSETNRKNYQWDL 3470
            E+RLKFG GF GRVHITE  D+  +E+P + F++GQT++AR+V K N+SE N KN+QW+L
Sbjct: 1046 ELRLKFGIGFHGRVHITEVCDENVIENPFSNFRIGQTVSARIVAKANKSENNGKNHQWEL 1105

Query: 3471 SIKSAVLSESGDIEDGL-SGECNFCPGKRVSGYVVAVDNEWAWLTISRCVKAQLFLLDSS 3647
            SIK  +L+ S ++E+ L   E     G+RV+GYV  V+NEW WLTISR +KAQLFLLD+S
Sbjct: 1106 SIKPEMLTGSIEVENKLVDAEFRISTGQRVTGYVYKVENEWIWLTISRHIKAQLFLLDTS 1165

Query: 3648 CEPRDLQEFQKRFTIGKSITGHILSFNKEKRIIRLLLRPLSVVPNGIADNSGRIVS---- 3815
            CEP +LQEFQKRF +GK+++G++LS NKEK+++R++L   S V NG  D  G++++    
Sbjct: 1166 CEPNELQEFQKRFEVGKAVSGYVLSANKEKKLLRMVLHQFS-VSNGTLD--GKVLNIDNQ 1222

Query: 3816 -----VEKVGAHIVEGDFLGGRISKILSGVGGLLVQIGPHLYGKVHFTELTDKWVANPLS 3980
                 +E +  HI +GD LGGRISKIL GVGGLLVQIGPHLYGKVHFTEL D WV++PLS
Sbjct: 1223 HCNPPIENLIPHIHKGDTLGGRISKILPGVGGLLVQIGPHLYGKVHFTELKDSWVSDPLS 1282

Query: 3981 DYEEGQFVKCKVLEISRSVTGNVHFDLSLRGFRDGTQILNSSGVQNDQEFPTTRYEKIEK 4160
             Y EGQFVKCKVLEI  S  G VH DLSL    +G               P +R EKI+ 
Sbjct: 1283 GYHEGQFVKCKVLEIGHSEKGTVHVDLSLWSSLNG------------MHSPNSRVEKIDN 1330

Query: 4161 LQKNMIVQGFVKNVMSKGCFIMLSRKVDAKVLISNLSNGFVENPEKEFPVGKLVQGKVLS 4340
            L  +M+VQG+VKNV SKGCFI+LSRK+DA++L++NLS+G+VE PE+EFP+GKLV G+VLS
Sbjct: 1331 LHSDMLVQGYVKNVTSKGCFILLSRKLDARILLANLSDGYVEKPEREFPIGKLVSGRVLS 1390

Query: 4341 VEPLSKRVEVTLKTESGVESSDTRRGDFSSLQVGDVISGSIKRIESFGLFITLEHTNMVG 4520
            VEPLS+RVEVTLKT S      +   DFSS+ VGD+I G+IKR+ES+GLFIT++ TNMVG
Sbjct: 1391 VEPLSRRVEVTLKTSSATSVQKSEVNDFSSILVGDIIFGTIKRVESYGLFITIDDTNMVG 1450

Query: 4521 LCHVSEVSDEQTEDIDSKYRVGERVVAKILKVDTERHRISLGMRKSYLTNDSDDHELLDQ 4700
            LCH+SE+SD+   +I++KY+ GERV AKILKVD ERHRISLGM+ SY+   + ++  +D 
Sbjct: 1451 LCHISELSDDHISNIETKYKAGERVAAKILKVDEERHRISLGMKNSYIKETTQNNGFVDD 1510

Query: 4701 YTVXXXXXXXXXXXXXXXXVENGSANGIYPDLAYVASRASIPPLEVTLDDMEGSDPGDFG 4880
             T                 VE       YP L+ V SRASI PLEV LDD+  S+  D  
Sbjct: 1511 -TQLSTFLENNSREIQNLDVEYEDEE--YPVLSQVESRASILPLEVDLDDVNHSNLDDAV 1567

Query: 4881 GENQEHLNEASTTTXXXXXXXXXXXXXXXXXXXXXXXQRLLEKDIPRTADEFDKLVRSSP 5060
            G+N  + NE +T                         +RL+  D+PRTADEF+KLVR SP
Sbjct: 1568 GQNHIYTNETNTIDEKSKRRAKKKAKEEKEQEIRAAEERLMLNDVPRTADEFEKLVRGSP 1627

Query: 5061 NSSFLWIKYMAFMLSLGEIENARAIAKRALATISFREEAEKLNVWVAYFNLENEYGNPPE 5240
            NSSFLWIKYMA MLSL +IE AR+IA+RAL TI+ REE+EKLN+W+AYFNLENEYGNPPE
Sbjct: 1628 NSSFLWIKYMALMLSLADIEKARSIAERALRTINIREESEKLNIWMAYFNLENEYGNPPE 1687

Query: 5241 EAVAKVFKEALQYCDREKVHLALLGVYERTDQYKLADELLDQMVKKYKKSCEVWLRRIKS 5420
            EAV KVF+ ALQYCD +KVHLALLG+YERT+Q+KLADELL++M KK+K SC+VWLRR+++
Sbjct: 1688 EAVVKVFQRALQYCDPKKVHLALLGMYERTEQHKLADELLEKMTKKFKHSCKVWLRRVQN 1747

Query: 5421 HLKQGKDGIDAIVKDALHKLDKHEHIKFKSQTAILAFKCGVPDTGRSMFELLLRENPNRT 5600
             LKQ +DG+  ++  AL  L +H+HIKF SQTAIL FK GVPD GRSMFE +LRE P RT
Sbjct: 1748 VLKQHQDGVQPVINRALLCLPRHKHIKFISQTAILEFKSGVPDRGRSMFEGMLREYPKRT 1807

Query: 5601 DLWNIYLDQEIRLGDEEVIRALFERATXXXXXXXXXXXXXXXYLEYEKGHGDEDRVEYVK 5780
            DLW++YLDQEIRLGD ++IRALFERA                YLEYEK  GDE+R+E VK
Sbjct: 1808 DLWSVYLDQEIRLGDIDIIRALFERAINLSLEPRKMKFLFKKYLEYEKSQGDEERIESVK 1867

Query: 5781 RKAIECVENSLA 5816
            RKA+E   ++LA
Sbjct: 1868 RKAMEYANSTLA 1879


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score = 2193 bits (5682), Expect = 0.0
 Identities = 1138/1924 (59%), Positives = 1395/1924 (72%), Gaps = 7/1924 (0%)
 Frame = +3

Query: 66   MAKPQQNKQPMKTKPN---KNPSLKPQXXXXXXRKQSNDS--SSLKPMQIEDDVPDFPRG 230
            MA P +   P K+K +   +  S KP       R + N++  S    +Q+EDDVPDFPRG
Sbjct: 1    MAPPSKKSHPKKSKRDDKLRGASKKP----FKPRMRQNEAVPSESLALQMEDDVPDFPRG 56

Query: 231  GGSLLSRKXXXXXXXXXXXXXXKEQXXXXXXXXXXXXXXXXYLEEDDFGSLFGEGVTGKL 410
            GGSLLSR+                +                Y  EDD GSLFG+G+TGKL
Sbjct: 57   GGSLLSRQEHDAIRAEVDAEFEAGERKTKKKNKNAKKTKKNYALEDDMGSLFGDGITGKL 116

Query: 411  PKYANKITLKNVSAGMKLWGVISEVNEKDLVVNLPGGLRGLIRASEASDLIAENEIKDTE 590
            P++ANKITLKN+S GMKLWGV++EVNEKDL ++LPGGLRGL+RASEA D +  NEIKD E
Sbjct: 117  PRFANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKDAE 176

Query: 591  HNFLSSNFHXXXXXXXXXXXXXXXXXXTKGKMKIWXXXXXXXXXXXXXXDAVQEGMVLTA 770
              FL   FH                   KGK +IW              DA+QEGMVLTA
Sbjct: 177  GIFLPRIFHIGQLVSCVVLQLDDDKKE-KGKRRIWLSLRLSLLHKGFTLDALQEGMVLTA 235

Query: 771  YVKSIEDHGYILQFGLSSFSGFLPRRNKDGCEMKVNAGQLLQGVVRNIDNARRVVHMSSD 950
            YVKSIEDHGYIL FGL SF+GFLP+ ++    +++N GQ+LQGV+R+ID A +VV++SSD
Sbjct: 236  YVKSIEDHGYILHFGLPSFTGFLPKSSQAE-NIEINTGQILQGVIRSIDKAHKVVYLSSD 294

Query: 951  PDIVSKCVTKDVKGISIDLLVPGMMVNARVQSTLENGIMLSFLTYFTGTVDIFHLENTCP 1130
            PD +SKCVTKD+KGISIDLL+PGMMVNARVQST ENG+MLSFLTYFTGTVDIFHL+ T P
Sbjct: 295  PDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFP 354

Query: 1131 STAWKEEYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPSHVQIGEIYDRSRIVRV 1310
            S+ WK++YNQ+KK+NARILFIDPSTRAVGLT+NPHLV+NKAPP  V+ G+IYD S+++RV
Sbjct: 355  SSNWKDDYNQNKKVNARILFIDPSTRAVGLTLNPHLVNNKAPPCPVKTGDIYDHSKVIRV 414

Query: 1311 DRGMGLLLDIPSAPVSTPGYVSIFDVSDXXXXXXXXXXXXGNHVRVRIVGFRHLEGQAMG 1490
            DRG+GLLL++PS P STP YV++FDV+D            G+HVRVRI+GFR+LEG AMG
Sbjct: 415  DRGLGLLLEVPSTPASTPTYVTLFDVADEEVRKMEKKYKEGSHVRVRILGFRNLEGLAMG 474

Query: 1491 IMKASAFEGSVFTHSDVKPGMVVKGKVISVENFGAFVQLYSGVKALCPLPHMSELDIVKP 1670
             +KASAFEGSVFTHSDVKPGMVVK KVI+V++FGA VQ  SGVKALCPL HMSE DIVKP
Sbjct: 475  TLKASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKP 534

Query: 1671 RKKFKVGAELVFRVLGCKSKRITVTHXXXXXXXXXXXXXXYADAAEGLVTHGWITKIEKH 1850
            RKKFKVGAEL+FRVLGCKSKRITVTH              Y DA EGL+THGWITKIEKH
Sbjct: 535  RKKFKVGAELIFRVLGCKSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKH 594

Query: 1851 GCFVRFYNGVQGFASRTELGLEPGVEPSLMYHVGQVVKCRVVSAIPDSRRINLSFIISPA 2030
            GCF+RFYNGVQGFA  +ELGLEPG   SLMYHVGQVVKCRV  ++P SRRINLSFII P 
Sbjct: 595  GCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRVKGSVPASRRINLSFIIKPT 654

Query: 2031 RGAVEDIIKLGAVVSAIVERMTPKAVIVKVNANSYIKGTILNEHLADQQGQATLMRSLLK 2210
            R + +D++KLG+VV  +V+R+TP A+IV V+A  Y+KGTI  EHLAD QG A LM+S LK
Sbjct: 655  RISEDDMVKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTLK 714

Query: 2211 PGYEFDQLLVLDFEGNSVVLSAKHSLINSAKQLPVDVAQFHPHLLTHGYICNVIDSGCFV 2390
            PGYEFDQLLVLD EGN+ +LSAK+SLINSA+QLP+D+ Q HP+ + HGYICN+I++GCFV
Sbjct: 715  PGYEFDQLLVLDVEGNNFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNIIETGCFV 774

Query: 2391 RFLGRVTAFSPKHKATDDQIADTSEAFYIGQSVRGEVLNVDSETGRITLSLKQSSCFSTD 2570
            RFLGR+T FSP++K  DDQ A  SEAF+IGQSVR  +L+V+SETGRITLSLKQS C STD
Sbjct: 775  RFLGRLTGFSPRNKVMDDQRAVPSEAFFIGQSVRSNILDVNSETGRITLSLKQSCCSSTD 834

Query: 2571 ASFIQAYFLWEEKIAKLQLSDSEKSDYKWLESLSVGNVVEGKVHEAKEFGVVLSFKEHND 2750
            ASFIQ YFL EEKIAKLQLSDSE S+ KW E  ++G V+EGK+H+AK+FGVV+SF+++ND
Sbjct: 835  ASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNIGTVIEGKIHDAKDFGVVISFEKYND 894

Query: 2751 VFGFISHYQLGGTTVETGSIVQAVVLDIAKGERLVDLSLKPDLVSRFKDQLKYPTQKKSQ 2930
            VFGFI+HYQL   T E GS VQAVVLD+AK ERLVDLSLKP+ + R K+     +Q   +
Sbjct: 895  VFGFITHYQL---TAERGSTVQAVVLDVAKTERLVDLSLKPEFLDRHKED-SSNSQAGKK 950

Query: 2931 KRKKDLSLNLEVHQTVNAIVEIVKENYLVLSLPGFSHAIGYASIADYNTQKLPHRQFVNG 3110
            KR+++    L+ HQTVNAIVEIVKENYL  S                    +  +QF++G
Sbjct: 951  KRRREAYKELQPHQTVNAIVEIVKENYLASSF-------------------IARKQFLHG 991

Query: 3111 QSVVATVGDLPAPSTTGRXXXXXXXXXXXXXXXXXXXXXXXXXYNVGSFVEAEITEIKPL 3290
            QSV+A+V  LP+PST GR                         YNVGS V+AEITEIKPL
Sbjct: 992  QSVIASVMALPSPSTVGRLLLVLKSVSEATETSSSKRAKKKSSYNVGSLVQAEITEIKPL 1051

Query: 3291 EMRLKFGFGFRGRVHITEANDDQTVEDPLTKFKVGQTLTARVVEKVNQSETNRKNYQWDL 3470
            E+RLKFG GF GRVHITE  D+  +E+P + F++GQT++AR+V K N+SE N KN+QW+L
Sbjct: 1052 ELRLKFGIGFHGRVHITEVCDENVIENPFSNFRIGQTVSARIVAKANKSENNGKNHQWEL 1111

Query: 3471 SIKSAVLSESGDIEDGL-SGECNFCPGKRVSGYVVAVDNEWAWLTISRCVKAQLFLLDSS 3647
            SIK  +L+ S ++E+ L   E     G+RV+GYV  V+NEW WLTISR +KAQLFLLD+S
Sbjct: 1112 SIKPEMLTGSIEVENKLVDAEFRISTGQRVTGYVYKVENEWIWLTISRHIKAQLFLLDTS 1171

Query: 3648 CEPRDLQEFQKRFTIGKSITGHILSFNKEKRIIRLLLRPLS-VVPNGIADNSGRIVSVEK 3824
            CEP +LQEFQKRF +GK+++G++LS NKEK+++R++L   S ++P               
Sbjct: 1172 CEPNELQEFQKRFEVGKAVSGYVLSANKEKKLLRMVLHQFSNLIP--------------- 1216

Query: 3825 VGAHIVEGDFLGGRISKILSGVGGLLVQIGPHLYGKVHFTELTDKWVANPLSDYEEGQFV 4004
               HI +GD LGGRISKIL GVGGLLVQIGPHLYGKVHFTEL D WV++PLS Y EGQFV
Sbjct: 1217 ---HIHKGDTLGGRISKILPGVGGLLVQIGPHLYGKVHFTELKDSWVSDPLSGYHEGQFV 1273

Query: 4005 KCKVLEISRSVTGNVHFDLSLRGFRDGTQILNSSGVQNDQEFPTTRYEKIEKLQKNMIVQ 4184
            KCKVLEI  S  G VH DLSL    +G               P +R EKI+ L  +M+VQ
Sbjct: 1274 KCKVLEIGHSEKGTVHVDLSLWSSLNG------------MHSPNSRVEKIDNLHSDMLVQ 1321

Query: 4185 GFVKNVMSKGCFIMLSRKVDAKVLISNLSNGFVENPEKEFPVGKLVQGKVLSVEPLSKRV 4364
            G+VKNV SKGCFI+LSRK+DA++L++NLS+G+VE PE+EFP+GKLV G+VLSVEPLS+RV
Sbjct: 1322 GYVKNVTSKGCFILLSRKLDARILLANLSDGYVEKPEREFPIGKLVSGRVLSVEPLSRRV 1381

Query: 4365 EVTLKTESGVESSDTRRGDFSSLQVGDVISGSIKRIESFGLFITLEHTNMVGLCHVSEVS 4544
            EVTLKT S      +   DFSS+ VGD+I G+IKR+ES+GLFIT++ TNMVGLCH+SE+S
Sbjct: 1382 EVTLKTSSATSVQKSEVNDFSSILVGDIIFGTIKRVESYGLFITIDDTNMVGLCHISELS 1441

Query: 4545 DEQTEDIDSKYRVGERVVAKILKVDTERHRISLGMRKSYLTNDSDDHELLDQYTVXXXXX 4724
            D+   +I++KY+ GERV AKILKVD ERHRISLGM+ SY+   + ++  +D  T      
Sbjct: 1442 DDHISNIETKYKAGERVAAKILKVDEERHRISLGMKNSYIKETTQNNGFVDD-TQLSTFL 1500

Query: 4725 XXXXXXXXXXXVENGSANGIYPDLAYVASRASIPPLEVTLDDMEGSDPGDFGGENQEHLN 4904
                       VE       YP L+ V SRASI PLEV LDD+  S+  D  G+N  + N
Sbjct: 1501 ENNSREIQNLDVEYEDEE--YPVLSQVESRASILPLEVDLDDVNHSNLDDAVGQNHIYTN 1558

Query: 4905 EASTTTXXXXXXXXXXXXXXXXXXXXXXXQRLLEKDIPRTADEFDKLVRSSPNSSFLWIK 5084
            E +T                         +RL+  D+PRTADEF+KLVR SPNSSFLWIK
Sbjct: 1559 ETNTIDEKSKRRAKKKAKEEKEQEIRAAEERLMLNDVPRTADEFEKLVRGSPNSSFLWIK 1618

Query: 5085 YMAFMLSLGEIENARAIAKRALATISFREEAEKLNVWVAYFNLENEYGNPPEEAVAKVFK 5264
            YMA MLSL +IE AR+IA+RAL TI+ REE+EKLN+W+AYFNLENEYGNPPEEAV KVF+
Sbjct: 1619 YMALMLSLADIEKARSIAERALRTINIREESEKLNIWMAYFNLENEYGNPPEEAVVKVFQ 1678

Query: 5265 EALQYCDREKVHLALLGVYERTDQYKLADELLDQMVKKYKKSCEVWLRRIKSHLKQGKDG 5444
             ALQYCD +KVHLALLG+YERT+Q+KLADELL++M KK+K SC+VWLRR+++ LKQ +DG
Sbjct: 1679 RALQYCDPKKVHLALLGMYERTEQHKLADELLEKMTKKFKHSCKVWLRRVQNVLKQHQDG 1738

Query: 5445 IDAIVKDALHKLDKHEHIKFKSQTAILAFKCGVPDTGRSMFELLLRENPNRTDLWNIYLD 5624
            +  ++  AL  L +H+HIKF SQTAIL FK GVPD GRSMFE +LRE P RTDLW++YLD
Sbjct: 1739 VQPVINRALLCLPRHKHIKFISQTAILEFKSGVPDRGRSMFEGMLREYPKRTDLWSVYLD 1798

Query: 5625 QEIRLGDEEVIRALFERATXXXXXXXXXXXXXXXYLEYEKGHGDEDRVEYVKRKAIECVE 5804
            QEIRLGD ++IRALFERA                YLEYEK  GDE+R+E VKRKA+E   
Sbjct: 1799 QEIRLGDIDIIRALFERAINLSLEPRKMKFLFKKYLEYEKSQGDEERIESVKRKAMEYAN 1858

Query: 5805 NSLA 5816
            ++LA
Sbjct: 1859 STLA 1862


>ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 1885

 Score = 1975 bits (5116), Expect = 0.0
 Identities = 1036/1926 (53%), Positives = 1332/1926 (69%), Gaps = 13/1926 (0%)
 Frame = +3

Query: 69   AKPQQNKQPMKTKPNKNPS----LKPQXXXXXXRKQSNDSSSLKPMQIEDDVPDFPRGGG 236
            +K  Q K     KP  + +     KP+         +  S +L  + +ED+VPDFPRGG 
Sbjct: 5    SKKPQKKNDSVDKPKIDKASKKIFKPKKREQNIAVAAAKSEALS-LPLEDEVPDFPRGGE 63

Query: 237  SLLSRKXXXXXXXXXXXXXXKEQXXXXXXXXXXXXXXXXYLEEDDFGSLFGEGVTGKLPK 416
               S K              K+                     DD+GSL G G+TGKLP+
Sbjct: 64   --FSAKGRNDYDEFGAEDPSKKTRKKKKGKNASGKSNEA---ADDWGSLSGNGITGKLPR 118

Query: 417  YANKITLKNVSAGMKLWGVISEVNEKDLVVNLPGGLRGLIRASEASDLIAENEIKDTEHN 596
              NKITL+N++ GMKLWGV++EVNEKDLVV+LPGGLRGL+ AS+A D I +++I+  E  
Sbjct: 119  RVNKITLRNITPGMKLWGVVAEVNEKDLVVSLPGGLRGLVHASDAVDPIFDDKIEVGEI- 177

Query: 597  FLSSNFHXXXXXXXXXXXXXXXXXXTKGKMKIWXXXXXXXXXXXXXXDAVQEGMVLTAYV 776
            FLS  F                    KG  KIW              D VQEGMVL AYV
Sbjct: 178  FLSGVF-CVGQLVSCVVLRLDDDKKEKGSRKIWLSLRLSLLHKNYNLDVVQEGMVLAAYV 236

Query: 777  KSIEDHGYILQFGLSSFSGFLPRRNKDGCEMKVNAGQLLQGVVRNIDNARRVVHMSSDPD 956
            KSIEDHGYIL FGL  F GFLP+ +  G   +V  G+LLQG+VR+ID  R+VV++SSDPD
Sbjct: 237  KSIEDHGYILHFGLPFFMGFLPKNSSAGWGGEVKIGKLLQGLVRSIDKVRKVVYLSSDPD 296

Query: 957  IVSKCVTKDVKGISIDLLVPGMMVNARVQSTLENGIMLSFLTYFTGTVDIFHLENTCPST 1136
             ++K VTKD++G+SIDLLVPGM+VNA V+S LENG+MLSFLTYFTGTVD+FHL+N  P  
Sbjct: 297  TITKSVTKDLRGLSIDLLVPGMLVNACVKSILENGVMLSFLTYFTGTVDLFHLQNIYPGK 356

Query: 1137 AWKEEYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPSHVQIGEIYDRSRIVRVDR 1316
             WK++ ++ +K+ +RILFIDPS+RAVGLT+NPHLV N+APPSHV+IG+IYD S++VRVDR
Sbjct: 357  NWKDKCSESQKVVSRILFIDPSSRAVGLTLNPHLVQNRAPPSHVKIGDIYDNSKVVRVDR 416

Query: 1317 GMGLLLDIPSAPVSTPGYVSIFDVSDXXXXXXXXXXXXGNHVRVRIVGFRHLEGQAMGIM 1496
            G+GLLL++PS P  TP +VS  +               GNHVRVRI+G R+LEG A G++
Sbjct: 417  GLGLLLEVPSIPEPTPAFVSYKE---------------GNHVRVRILGLRYLEGIATGVL 461

Query: 1497 KASAFEGSVFTHSDVKPGMVVKGKVISVENFGAFVQLYSGVKALCPLPHMSELDIVKPRK 1676
            KASA E  VFTHSDVKPGMVVK K++SV++FGA VQ+  GVKALCPL HMSEL+I KP K
Sbjct: 462  KASALEEEVFTHSDVKPGMVVKAKILSVDSFGAIVQIPGGVKALCPLRHMSELEISKPGK 521

Query: 1677 KFKVGAELVFRVLGCKSKRITVTHXXXXXXXXXXXXXXYADAAEGLVTHGWITKIEKHGC 1856
            KFKVGAELVFRVLGCKSKR+TVTH              YADA +GL+THGWITKIE HGC
Sbjct: 522  KFKVGAELVFRVLGCKSKRVTVTHKKTLVKSKLGIISSYADATDGLITHGWITKIEVHGC 581

Query: 1857 FVRFYNGVQGFASRTELGLEPGVEPSLMYHVGQVVKCRVVSAIPDSRRINLSFIISPARG 2036
            FVRFYNGVQGFA R+ELGLEPG +P  +Y+VGQ VKCRV+S IP SRRINL+        
Sbjct: 582  FVRFYNGVQGFAPRSELGLEPGADPGTVYNVGQAVKCRVISCIPASRRINLN-------- 633

Query: 2037 AVEDIIKLGAVVSAIVERMTPKAVIVKVNANSYIKGTILNEHLADQQGQATLMRSLLKPG 2216
               D++ LG++VS  V+R+T  AV+V VNA+ + +GTI  EHLAD  GQA LM S+LKPG
Sbjct: 634  ---DMVTLGSLVSGAVDRITSNAVVVYVNASGFSRGTISMEHLADHHGQAILMHSVLKPG 690

Query: 2217 YEFDQLLVLDFEGNSVVLSAKHSLINSAKQLPVDVAQFHPHLLTHGYICNVIDSGCFVRF 2396
            Y FDQLLVLD +GN+++LSAK SLI  A+Q+P D+ Q HP+ + HGYICN+I+SGCFVRF
Sbjct: 691  YNFDQLLVLDVKGNNLILSAKSSLIKHAQQIPADINQIHPNSVVHGYICNLIESGCFVRF 750

Query: 2397 LGRVTAFSPKHKATDDQIADTSEAFYIGQSVRGEVLNVDSETGRITLSLKQSSCFSTDAS 2576
            LG +T F+P++KA DDQ ++  EA+YIGQSVR  + NV SETGR+TLSLKQ++C STDAS
Sbjct: 751  LGHLTGFAPRNKAADDQKSNILEAYYIGQSVRSNISNVSSETGRVTLSLKQTACSSTDAS 810

Query: 2577 FIQAYFLWEEKIAKLQLSDSEKSDYKWLESLSVGNVVEGKVHEAKEFGVVLSFKEHNDVF 2756
            FIQ YFL ++KIA+L+   S  SD KW E  ++G V +GKV   ++ G+V+SF+ +NDVF
Sbjct: 811  FIQDYFLMDDKIARLEYCGSGASDTKWDEGFNIGMVAKGKVKAVEDVGLVISFEHYNDVF 870

Query: 2757 GFISHYQLGGTTVETGSIVQAVVLDIAKGERLVDLSLKPDLVSRFKDQLKYPTQKKSQKR 2936
            GFI++YQL GT +E+GSIV+A+VLD+ K ++LV+L+LKP+ ++R K+     T KK  KR
Sbjct: 871  GFIANYQLAGTILESGSIVEALVLDVGKADKLVELTLKPEFINRSKESSISRTNKK--KR 928

Query: 2937 KKDLSLNLEVHQTVNAIVEIVKENYLVLSLPGFSHAIGYASIADYNTQKLPHRQFVNGQS 3116
            +++ S +L +HQTVNA+VEIVKENYLVLS+P   + IGYAS++DYN Q+ PH+Q+ NGQS
Sbjct: 929  RREASKDLVLHQTVNAVVEIVKENYLVLSIPENDYTIGYASVSDYNAQRFPHKQYQNGQS 988

Query: 3117 VVATVGDLPAPSTTGRXXXXXXXXXXXXXXXXXXXXXXXXXYNVGSFVEAEITEIKPLEM 3296
            VVATV  LP+P T+GR                         Y VG+ VEAEIT+IK LE+
Sbjct: 989  VVATVMALPSPETSGR--LLLLVDVVNETSSSSKRTKKKSSYKVGTLVEAEITDIKTLEL 1046

Query: 3297 RLKFGFGFRGRVHITEANDDQTVEDPLTKFKVGQTLTARVVEKVNQSETNRKNYQWDLSI 3476
            +LKFGFG  GR+HITE      +E+P + +KVGQT+TAR+V K N+S+ NRK  QW+LS+
Sbjct: 1047 KLKFGFGLYGRIHITEVYYGNVLENPFSSYKVGQTVTARIVAKPNESDGNRKGSQWELSV 1106

Query: 3477 KSAVLSESGDIEDGLSGECNFCPGKRVSGYVVAVDNEWAWLTISRCVKAQLFLLDSSCEP 3656
            +  +++ S DI+D +S    F  G+ V+GYV  V++EW WLTISR V+AQL++LDS+ EP
Sbjct: 1107 RPEMVTGSSDIDD-VSENLEFKIGQCVAGYVYKVESEWVWLTISRNVRAQLYILDSATEP 1165

Query: 3657 RDLQEFQKRFTIGKSITGHILSFNKEKRIIRLLLRPLSVVPNGIADNSGRIVSVEKVGAH 3836
             +L++FQ R+ +G+ ++GHILS N EK+++RL++RP S +  G ++     V  + + A+
Sbjct: 1166 SELEDFQNRYHVGQPVSGHILSVNMEKKLLRLVVRPFSTLSCGTSEEPLTNVVDKDLTAY 1225

Query: 3837 IVEGDFLGGRISKILSGVGGLLVQIGPHLYGKVHFTELTDKWVANPLSDYEEGQFVKCKV 4016
            + EGD LGGR+SKIL GVGGLLVQ+GP  YGKVHFTEL D WV +PLS Y E QFVKC V
Sbjct: 1226 VHEGDILGGRVSKILPGVGGLLVQVGPRTYGKVHFTELADTWVPDPLSGYHEEQFVKCIV 1285

Query: 4017 LEISRSVTGNVHFDLSLRGFRDGTQILNSSGVQNDQEFPTTRYEKIEKLQKNMIVQGFVK 4196
            LE+S +V G +H DLSL       ++   S V  + +      EKIE L  +MIV+G++K
Sbjct: 1286 LEVSHTVKGTIHVDLSLGS--SNVKLSQDSAVNANSKC----VEKIEDLHPDMIVKGYIK 1339

Query: 4197 NVMSKGCFIMLSRKVDAKVLISNLSNGFVENPEKEFPVGKLVQGKVLSVEPLSKRVEVTL 4376
            NV SKGCFIMLSRK+DAK+L+SNLS  +V+ PEKEFPVGKLV G+V SVEPLS RVEVTL
Sbjct: 1340 NVTSKGCFIMLSRKIDAKILLSNLSEQYVQEPEKEFPVGKLVIGRVTSVEPLSNRVEVTL 1399

Query: 4377 KTESGVESSDTRRGDFSSLQVGDVISGSIKRIESFGLFITLEHTNMVGLCHVSEVSDEQT 4556
            K  +      +   D S   VGDV+SG IKR+ESFGLFI +++TNMVGLCH+SE+SD + 
Sbjct: 1400 KMSTAPNIPKSEIIDLSKFHVGDVVSGRIKRVESFGLFIAIDNTNMVGLCHISEISDNRI 1459

Query: 4557 EDIDSKYRVGERVVAKILKVDTERHRISLGMRKSYL---------TNDSDDHELLDQYTV 4709
            E+I++ YR GERV A+ILKVD ERHRISLGM+ SY+         + +  D  ++D    
Sbjct: 1460 ENIEANYRAGERVKARILKVDEERHRISLGMKNSYMRGETVLQIPSKEESDEPIVDG--- 1516

Query: 4710 XXXXXXXXXXXXXXXXVENGSANGIYPDLAYVASRASIPPLEVTLDDMEGSDPGDFGGEN 4889
                            ++       +P L+    RA IPPL+V LDD +  D  +   ++
Sbjct: 1517 MKSITSMNSSLFGTSNIDVEDEINQFPILSQAQERADIPPLDVALDDFDQFDANNANSQS 1576

Query: 4890 QEHLNEASTTTXXXXXXXXXXXXXXXXXXXXXXXQRLLEKDIPRTADEFDKLVRSSPNSS 5069
            +EH NE                            +RLLE D+PRTADEF++L+RSSPNSS
Sbjct: 1577 EEHANEEDIVNEKHKRREKKKAKEEREKQIRAAEERLLEDDVPRTADEFERLIRSSPNSS 1636

Query: 5070 FLWIKYMAFMLSLGEIENARAIAKRALATISFREEAEKLNVWVAYFNLENEYGNPPEEAV 5249
            F WIKYM FM+S+ ++E AR+IA+RAL TI+ REE EKLN+W AYFNLEN+YGNP EEAV
Sbjct: 1637 FTWIKYMDFMVSMADVEKARSIAERALRTINIREENEKLNIWKAYFNLENKYGNPREEAV 1696

Query: 5250 AKVFKEALQYCDREKVHLALLGVYERTDQYKLADELLDQMVKKYKKSCEVWLRRIKSHLK 5429
             KVF+ ALQY D +KV+LALLG+YERT+Q+ LADELL++M KK+K SC+VWLRRI+S LK
Sbjct: 1697 MKVFQRALQYNDPKKVYLALLGMYERTEQHNLADELLNKMTKKFKHSCKVWLRRIQSLLK 1756

Query: 5430 QGKDGIDAIVKDALHKLDKHEHIKFKSQTAILAFKCGVPDTGRSMFELLLRENPNRTDLW 5609
            Q KDGI  ++  A   L KH+HIKF SQTAIL FK G PD GRSMFE +LRE P RTDLW
Sbjct: 1757 QNKDGIQPVIDRASLSLPKHKHIKFFSQTAILEFKVGFPDRGRSMFEKILREYPKRTDLW 1816

Query: 5610 NIYLDQEIRLGDEEVIRALFERATXXXXXXXXXXXXXXXYLEYEKGHGDEDRVEYVKRKA 5789
            ++YLDQEI+  DE++I ALFERA                YL+YE   GD++R+E VKRKA
Sbjct: 1817 SVYLDQEIQHKDEDIIHALFERAVSLSLPPKKMKFLFKKYLDYEMSQGDQERIESVKRKA 1876

Query: 5790 IECVEN 5807
            IE VE+
Sbjct: 1877 IEYVES 1882


>ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sativus]
          Length = 1898

 Score = 1897 bits (4914), Expect = 0.0
 Identities = 1026/1953 (52%), Positives = 1312/1953 (67%), Gaps = 36/1953 (1%)
 Frame = +3

Query: 66   MAKPQQNKQPMKTKPNKNPSLKPQXXXXXXRKQSNDSSSLKP----MQIEDDVPDFPRGG 233
            MA P +  Q   +K NK+ S KP         +   S + KP    +QIEDDVPDFPRGG
Sbjct: 1    MAPPSRKSQD-GSKFNKH-SKKP------FNSKKKTSETAKPETVSLQIEDDVPDFPRGG 52

Query: 234  GSLLSRKXXXXXXXXXXXXXXKEQXXXXXXXXXXXXXXXXYLEEDDFGSLFGEGVTGKLP 413
            G  +S+                +                     DD  SL   GV G LP
Sbjct: 53   GGYMSQNKGEKVRAEGDKEFQNDDLKMTTKRGKKRRKHPS--NGDDLESLLNNGVVGNLP 110

Query: 414  KYANKITLKNVSAGMKLWGVISEVNEKDLVVNLPGGLRGLIRASEASDLIAENEIKDTEH 593
            KYANKITLKN++  MK WGV++EVN+KDLV++LPGGLRGL+ A+EA D I E E++DTEH
Sbjct: 111  KYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAAEAFDPILEKEVEDTEH 170

Query: 594  NFLSSNFHXXXXXXXXXXXXXXXXXXTKGKMKIWXXXXXXXXXXXXXXDAVQEGMVLTAY 773
            + L   FH                  + GK KIW              D +QEGMVLT+Y
Sbjct: 171  DLLPVMFHVGQLVPCVVLKVDDDKKES-GKRKIWLSLRLSMLYKDFTLDLLQEGMVLTSY 229

Query: 774  VKSIEDHGYILQFGLSSFSGFLPRRNKDGCEMKVNAGQLLQGVVRNIDNARRVVHMSSDP 953
            VKSIEDHGYIL FGL+SF+GFLP+  + G +  ++ GQLLQ VVR+ID  R+VV+ SSD 
Sbjct: 230  VKSIEDHGYILHFGLTSFTGFLPKTKQSGKKSLLHVGQLLQCVVRSIDKTRKVVYFSSDQ 289

Query: 954  DIVSKCVTKDVKGISIDLLVPGMMVNARVQSTLENGIMLSFLTYFTGTVDIFHLENTCPS 1133
            DIVS  V KD+KGISIDLL+PGMMV+ARVQSTLENGI+LSFLTYF GTVD+FHL+N+  S
Sbjct: 290  DIVSSSVAKDLKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHS 349

Query: 1134 TAWKEEYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPSHVQIGEIYDRSRIVRVD 1313
            + WK+ YNQ+ KMNARILFIDPSTRAVGLT+ PHLV NKA P HV+IG+IYD +++VRVD
Sbjct: 350  SNWKDFYNQNMKMNARILFIDPSTRAVGLTLIPHLVRNKAAPPHVRIGDIYDSAKVVRVD 409

Query: 1314 RGMGLLLDIPSAPVSTPGYVSIFDVSDXXXXXXXXXXXXGNHVRVRIVGFRHLEGQAMGI 1493
            RG GLLL++PS+P STP +VS  +               G+ VRVRI+GFRHLEG A+G 
Sbjct: 410  RGFGLLLEVPSSPESTPTFVSFKE---------------GSRVRVRILGFRHLEGLAIGT 454

Query: 1494 MKASAFEGSVFTHSDVKPGMVVKGKVISVENFGAFVQLYSGVKALCPLPHMSELDIVKPR 1673
            +KASAFEG VF++SDVKPG +++ KVI V++FGA VQ   G+KALCPL HMSE +I KPR
Sbjct: 455  LKASAFEGPVFSYSDVKPGTLIRAKVIVVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPR 514

Query: 1674 KKFKVGAELVFRVLGCKSKRITVTHXXXXXXXXXXXXXXYADAAEGLVTHGWITKIEKHG 1853
            KKFKVGAEL+FRVLGCKSKRITVTH              YADA  GLVTHGWITKIEKHG
Sbjct: 515  KKFKVGAELIFRVLGCKSKRITVTHKKTLVKSKLEVLSSYADATAGLVTHGWITKIEKHG 574

Query: 1854 CFVRFYNGVQGFASRTELGLEPGVEPSLMYHVGQVVKCRVVSAIPDSRRINLSFIISPAR 2033
            CFVRFYNGVQGFA R ELG+EPG +PS  YH+GQV+KCR+ S+   S+RI+L+       
Sbjct: 575  CFVRFYNGVQGFAPRFELGIEPGSDPSSTYHIGQVIKCRITSSTHSSKRISLN------- 627

Query: 2034 GAVEDIIKLGAVVSAIVERMTPKAVIVKVNANSYIKGTILNEHLADQQGQATLMRSLLKP 2213
                  ++LG +V+ +V+ +T   V + +N   Y +G I  EHL+D Q  A+ ++S+LKP
Sbjct: 628  ----TKVELGCIVTGVVDEITETHVTLYINRTDYSRGRISTEHLSDHQAHASSIKSVLKP 683

Query: 2214 GYEFDQLLVLDFEGNSVVLSAKHSLINSAKQLPVDVAQFHPHLLTHGYICNVIDSGCFVR 2393
            GY+FDQLLVL  EG S++LSAK SLI  A  LP D +  +P+ + HG+ICN+I++GCFVR
Sbjct: 684  GYQFDQLLVLAIEGESLILSAKQSLIKLAHMLPSDSSHVNPYSIIHGFICNIIEAGCFVR 743

Query: 2394 FLGRVTAFSPKHKATDDQIADTSEAFYIGQSVRGEVLNVDSETGRITLSLKQSSCFSTDA 2573
            FLGR+T FSP++KA  DQ     E +YIGQSVR  V++V  ETGRITLSLKQS+CFSTDA
Sbjct: 744  FLGRLTGFSPRNKAMQDQKLYLRETYYIGQSVRSNVVDVSGETGRITLSLKQSTCFSTDA 803

Query: 2574 SFIQAYFLWEEKIAKLQLSDSEKSDYKWLESLSVGNVVEGKVHEAKEFGVVLSFKEHNDV 2753
            SFIQ +F  EEKIAKLQ  D    +  W E  ++G+VVEG+V E K+ GV +SF++++DV
Sbjct: 804  SFIQEFFSTEEKIAKLQSLD----ESNWAEEFAIGSVVEGEVQEVKDIGVTISFEKYHDV 859

Query: 2754 FGFISHYQLGGTTVETGSIVQAVVLDIAKGERLVDLSLKPDLVSRFKDQLKYPTQKKSQK 2933
            FGFI+ + L G+ VETGS +QA VLD++K ERLVDLSLKP+LV ++       T +K  K
Sbjct: 860  FGFIALHGLSGSIVETGSTIQAAVLDVSKTERLVDLSLKPELVDKWGGSSSRQTNRK--K 917

Query: 2934 RKKDLSLNLEVHQTVNAIVEIVKENYLVLSLPGFSHAIGYASIADYNTQKLPHRQFVNGQ 3113
            RK +   +LE++QTV+ +VE VKENYLVLSLP F HAIGYAS  DYNTQ+L  + F  GQ
Sbjct: 918  RKAEAPKDLEMNQTVHTVVEAVKENYLVLSLPEFGHAIGYASTYDYNTQRLHQKHFTVGQ 977

Query: 3114 SVVATVGDLPAPSTTGRXXXXXXXXXXXXXXXXXXXXXXXXXYNVGSFVEAEITEIKPLE 3293
            SVVATV  LP PST GR                           VGS V AEI +++PLE
Sbjct: 978  SVVATVVALPCPSTFGRLLLLLKSISEAIVTPGSKRSRKNSSCEVGSLVHAEIIDVQPLE 1037

Query: 3294 MRLKFGFGFRGRVHITE------ANDDQTVEDPLTKFKVGQTLTARVVEKVNQSETNRKN 3455
            MRLKFG G RGR+H+TE         D+  E P + F+VGQT+ AR+V + N S +  K 
Sbjct: 1038 MRLKFGVGLRGRIHVTEFCAQVSNTPDEASEAPFSNFRVGQTVVARIVAEANHSASKGKG 1097

Query: 3456 YQWDLSIKSAVLSESGDIEDGLSGE-CNFCPGKRVSGYVVAVDNEWAWLTISRCVKAQLF 3632
            Y W+LS+K  VL +   +   +  E   F  G+RV+ YV  V+ +WAWL ++R V AQLF
Sbjct: 1098 YLWELSVKPEVLKDFSAVGGEIVNEDLGFSIGQRVTAYVSNVNGDWAWLAVTRRVSAQLF 1157

Query: 3633 LLDSSCEPRDLQEFQKRFTIGKSITGHILSFNKEKRIIRLLLRPLSVVPNGIADNSGRIV 3812
            +LDSS EP +LQEF K F +GK+++G+I +   EK+I+RL+L  LS + +G +D     +
Sbjct: 1158 ILDSSSEPSELQEFSKHFYVGKAVSGYISNIIGEKKILRLVLHHLSAISSGKSDEENSKI 1217

Query: 3813 S------VEKVGAHIVEGDFLGGRISKILSGVGGLLVQIGPHLYGKVHFTELTDKWVANP 3974
            S       +KV  H+ EGD +GGRISKIL GVGGLLVQIGPHL+G+VH+TELTD  V +P
Sbjct: 1218 SNLPTDVCKKVICHLNEGDIVGGRISKILPGVGGLLVQIGPHLFGRVHYTELTDCLVPDP 1277

Query: 3975 LSDYEEGQFVKCKVLEISRSVTGNVHFDLSLRGFRDGTQILNSSGVQNDQEFPTTRYE-- 4148
            LS Y+EGQFVKCKV+EI+ +V G  H DLSLR         +S+G+   +    + +E  
Sbjct: 1278 LSGYKEGQFVKCKVIEITHAVKGTTHIDLSLR---------SSAGILCQKNIECSNHENI 1328

Query: 4149 -----KIEKLQKNMIVQGFVKNVMSKGCFIMLSRKVDAKVLISNLSNGFVENPEKEFPVG 4313
                 KIE +  +M VQG+VKN+  KGCFIMLSR ++AK+L+SNLS+G+++NPEKEFP G
Sbjct: 1329 ASGRVKIEDIHAHMEVQGYVKNISPKGCFIMLSRGLEAKILLSNLSDGYIDNPEKEFPTG 1388

Query: 4314 KLVQGKVLSVEPLSKRVEVTLKTESGVESSDTRRGDFSSLQVGDVISGSIKRIESFGLFI 4493
            KLV+G++LSVEPLSKRVEVTLK+ +   +      D  S   GD+ISG IKR+ESFGLFI
Sbjct: 1389 KLVRGRILSVEPLSKRVEVTLKSVTETGALRGSNNDLRSFSAGDIISGRIKRVESFGLFI 1448

Query: 4494 TLEHTNMVGLCHVSEVSDEQTEDIDSKYRVGERVVAKILKVDTERHRISLGMRKSYL--- 4664
            ++++T++VGLCHVSEVSD+  E ++ +Y  G+ V AK+LKVD +RHRI+LGM++SY+   
Sbjct: 1449 SIDNTDVVGLCHVSEVSDDPVESLEFRYHAGDTVKAKVLKVDEKRHRIALGMKRSYIGER 1508

Query: 4665 ----TNDSDDHELL---DQYTVXXXXXXXXXXXXXXXXVENGSANGIYPD--LAYVASRA 4817
                TN  ++HE     D +                    +   + I P+  L    SRA
Sbjct: 1509 SELCTNMEEEHEDAADGDNFIGETRLSMDPDSSSTKFKDMDDDFDNIEPEQPLRLAESRA 1568

Query: 4818 SIPPLEVTLDDMEGSDPGDFGGENQEHLNEASTTTXXXXXXXXXXXXXXXXXXXXXXXQR 4997
             +P LEVTLDD++ +D      EN+E L   + +                        +R
Sbjct: 1569 LVPSLEVTLDDIDETDMVTLQSENKE-LTSGTDSKEKNDRREKKKAKEEREMEVRAAEER 1627

Query: 4998 LLEKDIPRTADEFDKLVRSSPNSSFLWIKYMAFMLSLGEIENARAIAKRALATISFREEA 5177
            LL+ + P T DEF+KLVRSSPNSSF+WIKYM F  +  ++E AR+IA+RAL TI+ REE 
Sbjct: 1628 LLQNNSPTTVDEFEKLVRSSPNSSFVWIKYMDFFKA--DVEKARSIAERALRTINIREEN 1685

Query: 5178 EKLNVWVAYFNLENEYGNPPEEAVAKVFKEALQYCDREKVHLALLGVYERTDQYKLADEL 5357
            EKLNVW+AYFNLENEYGNP E+AV K+F+ ALQ  D +KVHLALLG+YERT+Q  LADEL
Sbjct: 1686 EKLNVWLAYFNLENEYGNPKEDAVTKIFQRALQCNDPKKVHLALLGMYERTNQDNLADEL 1745

Query: 5358 LDQMVKKYKKSCEVWLRRIKSHLKQGKDGIDAIVKDALHKLDKHEHIKFKSQTAILAFKC 5537
            LD+M+K++K SC+VWLRR++S  K+ +  I +IV  AL  L K +HIK+ SQTAIL FKC
Sbjct: 1746 LDKMIKRFKHSCKVWLRRMESLFKKKQVEIQSIVNRALLCLPKRKHIKYISQTAILEFKC 1805

Query: 5538 GVPDTGRSMFELLLRENPNRTDLWNIYLDQEIRLGDEEVIRALFERATXXXXXXXXXXXX 5717
            GV D GRSMFE +LRE P RTDLW+IYLDQEIRLGD+++IRALFERA             
Sbjct: 1806 GVADRGRSMFEGILREYPKRTDLWSIYLDQEIRLGDKDMIRALFERAISLSLAPKKMKFL 1865

Query: 5718 XXXYLEYEKGHGDEDRVEYVKRKAIECVENSLA 5816
               YLEYEK  GDE+R+E VK+KA+E VEN+LA
Sbjct: 1866 FKKYLEYEKSVGDEERIESVKQKALEYVENTLA 1898


>ref|NP_187803.4| RNA binding protein [Arabidopsis thaliana]
            gi|332641610|gb|AEE75131.1| RNA binding protein
            [Arabidopsis thaliana]
          Length = 1896

 Score = 1884 bits (4880), Expect = 0.0
 Identities = 1007/1934 (52%), Positives = 1302/1934 (67%), Gaps = 18/1934 (0%)
 Frame = +3

Query: 69   AKPQQNKQPMKTKPNKNPSLKPQXXXXXXRKQSNDSSSLKPMQIEDDVPDFPRGGGSLLS 248
            A  ++N      KP K P  K +             S    +Q+ED VPDFPRGGG+ LS
Sbjct: 9    ANGKRNDSTKSFKPMKKPFKKTKDDVAAR-------SEAMALQLED-VPDFPRGGGTSLS 60

Query: 249  RKXXXXXXXXXXXXXXKEQXXXXXXXXXXXXXXXXYLEEDDFGSLFGEGVTGKLPKYANK 428
            +K               ++                  + DD G LFG G+ GK P+YANK
Sbjct: 61   KKEREKLYEEVDAEFDADERVSKKSKGGKSKKRIPS-DLDDLGLLFGGGLHGKRPRYANK 119

Query: 429  ITLKNVSAGMKLWGVISEVNEKDLVVNLPGGLRGLIRASEASDLIAENEIKDTEHNFLSS 608
            IT KN+S GMKL GV++EVN+KD+V++LPGGLRGL+RASE SD   +  I+D E+  L  
Sbjct: 120  ITTKNISPGMKLLGVVTEVNQKDIVISLPGGLRGLVRASEVSDF-TDRGIEDDENELLGD 178

Query: 609  NFHXXXXXXXXXXXXXXXXXXTKGKMKIWXXXXXXXXXXXXXXDAVQEGMVLTAYVKSIE 788
             F                     GK KIW              D+ Q GMV +A VKSIE
Sbjct: 179  IFSVGQLVPCIVLELDDDKKEA-GKRKIWLSLRLSLLHKGFSFDSFQLGMVFSANVKSIE 237

Query: 789  DHGYILQFGLSSFSGFLPRRNKDGCEMKVNAGQLLQGVVRNIDNARRVVHMSSDPDIVSK 968
            DHG IL FGL S +GF+   +    E  +  GQL+QGVV  ID  R++VH+SSDPD V+K
Sbjct: 238  DHGSILHFGLPSITGFIEISDDGNQESGMKTGQLIQGVVTKIDRDRKIVHLSSDPDSVAK 297

Query: 969  CVTKDVKGISIDLLVPGMMVNARVQSTLENGIMLSFLTYFTGTVDIFHLENTCPSTAWKE 1148
            C+TKD+ G+S DLL+PGMMVNARVQS LENGI+  FLTYF GTVD+FHL+N   + +WK+
Sbjct: 298  CLTKDLSGMSFDLLIPGMMVNARVQSVLENGILFDFLTYFNGTVDLFHLKNPLSNKSWKD 357

Query: 1149 EYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPSHVQIGEIYDRSRIVRVDRGMGL 1328
            EYNQ+K +NARILFIDPS+RAVGLT++PH+V NKAPP HV  G+I+D +++VR+D+  GL
Sbjct: 358  EYNQNKTVNARILFIDPSSRAVGLTLSPHVVCNKAPPLHVFSGDIFDEAKVVRIDKS-GL 416

Query: 1329 LLDIPSAPVSTPGYVSIFDVSDXXXXXXXXXXXXGNHVRVRIVGFRHLEGQAMGIMKASA 1508
            LL++PS P  TP YVS  +               GNH+RVR++G + +EG A+G +K SA
Sbjct: 417  LLELPSKPTPTPAYVSFKE---------------GNHIRVRVLGLKQMEGLAVGTLKESA 461

Query: 1509 FEGSVFTHSDVKPGMVVKGKVISVENFGAFVQLYSGVKALCPLPHMSELDIVKPRKKFKV 1688
            FEG VFTHSDVKPGMV K KVISV+ FGA VQ   G+KA+CPL HMSE ++ KPRKKFKV
Sbjct: 462  FEGPVFTHSDVKPGMVTKAKVISVDTFGAIVQFSGGLKAMCPLRHMSEFEVTKPRKKFKV 521

Query: 1689 GAELVFRVLGCKSKRITVTHXXXXXXXXXXXXXXYADAAEGLVTHGWITKIEKHGCFVRF 1868
            GAELVFRVLGCKSKRITVT+              Y DA EGLVTHGWITKIEKHGCFVRF
Sbjct: 522  GAELVFRVLGCKSKRITVTYKKTLVKSKLPILSSYTDATEGLVTHGWITKIEKHGCFVRF 581

Query: 1869 YNGVQGFASRTELGLEPGVEPSLMYHVGQVVKCRVVSAIPDSRRINLSFIISPARGAVED 2048
            YNGVQGF  R ELGLEPG +P  ++HVG+VVKCRV SA+  ++RI L+           D
Sbjct: 582  YNGVQGFVPRFELGLEPGSDPDSVFHVGEVVKCRVTSAVHGTQRITLN-----------D 630

Query: 2049 IIKLGAVVSAIVERMTPKAVIVKVNANSYIKGTILNEHLADQQGQATLMRSLLKPGYEFD 2228
             IKLG++VS I++ +T +AVIV+V + S +KGTI  EHLAD   QA L+ SLL+PGYE D
Sbjct: 631  SIKLGSIVSGIIDTITSQAVIVRVKSKSVVKGTISAEHLADHHEQAKLIMSLLRPGYELD 690

Query: 2229 QLLVLDFEGNSVVLSAKHSLINSAKQLPVDVAQFHPHLLTHGYICNVIDSGCFVRFLGRV 2408
            +LLVLD EGN++ LS+K+SLI  A++LP D  Q  P+ + HGY+CN+I++GCFVRFLGR+
Sbjct: 691  KLLVLDIEGNNMALSSKYSLIKLAEELPSDFNQLQPNSVVHGYVCNLIENGCFVRFLGRL 750

Query: 2409 TAFSPKHKATDDQIADTSEAFYIGQSVRGEVLNVDSETGRITLSLKQSSCFSTDASFIQA 2588
            T F+P+ KA DD  AD SE+F++GQSVR  +++V+ E  RITLSLKQSSC S DASF+Q 
Sbjct: 751  TGFAPRSKAIDDPKADVSESFFVGQSVRANIVDVNQEKSRITLSLKQSSCASVDASFVQE 810

Query: 2589 YFLWEEKIAKLQLSDSEKSDYKWLESLSVGNVVEGKVHEAKEFGVVLSFKEHNDVFGFIS 2768
            YFL +EKI+ LQ SD  KSD  W+E  S+G++++G + E  + GVV++F   N+V GFI 
Sbjct: 811  YFLMDEKISDLQSSDITKSDCSWVEKFSIGSLIKGTIQEQNDLGVVVNFDNINNVLGFIP 870

Query: 2769 HYQLGGTTVETGSIVQAVVLDIAKGERLVDLSLKPDLVSRFKDQLKYPTQKKSQKRKKDL 2948
             + +GG T+  GS+V AVVLDI++ ERLVDLSL+P+L++    ++   ++KK   RK+ +
Sbjct: 871  QHHMGGATLVPGSVVNAVVLDISRAERLVDLSLRPELLNNLTKEVSNSSKKK---RKRGI 927

Query: 2949 SLNLEVHQTVNAIVEIVKENYLVLSLPGFSHAIGYASIADYNTQKLPHRQFVNGQSVVAT 3128
            S  LEVHQ V+A+VEIVKE +LVLS+P   + IGYAS++DYNTQKLP +QF  GQSVVA+
Sbjct: 928  SKELEVHQRVSAVVEIVKEQHLVLSIPEHGYTIGYASVSDYNTQKLPVKQFSTGQSVVAS 987

Query: 3129 VGDLPAPSTTGRXXXXXXXXXXXXXXXXXXXXXXXXXYNVGSFVEAEITEIKPLEMRLKF 3308
            V  +  P T+GR                           VGS V AEITEIKP E+R+ F
Sbjct: 988  VKAVQNPLTSGRLLLLLDSVSGTSETSRSKRAKKKSSCEVGSVVHAEITEIKPFELRVNF 1047

Query: 3309 GFGFRGRVHITEA--NDDQTVEDPLTKFKVGQTLTARVVEKVNQSETNRKNYQWDLSIKS 3482
            G  FRGR+HITE   ND  T ++P  KF+VGQ+++ARVV K   ++  +K   W+LS+K 
Sbjct: 1048 GNSFRGRIHITEVLVNDASTSDEPFAKFRVGQSISARVVAKPCHTDI-KKTQLWELSVKP 1106

Query: 3483 AVLSESGDIEDGLSGE-CNFCPGKRVSGYVVAVDNEWAWLTISRCVKAQLFLLDSSCEPR 3659
            A+L +S +  D    E   F  G+ V GYV  VD EW WL +SR V A++F+LD+SC+  
Sbjct: 1107 AMLKDSSEFNDTQESEQLEFAAGQCVIGYVYKVDKEWVWLAVSRNVTARIFILDTSCKAH 1166

Query: 3660 DLQEFQKRFTIGKSITGHILSFNKEKRIIRLLLRPLSVVPNGIADNSGR-------IVSV 3818
            +L+EF++RF IGK+++G++L++NKEK+ +RL+ RPL  +   IA+  G         +  
Sbjct: 1167 ELEEFERRFPIGKAVSGYVLTYNKEKKTLRLVQRPLLFIHKSIANGGGSKTDKPDSSIPG 1226

Query: 3819 EKVGAHIVEGDFLGGRISKILSGVGGLLVQIGPHLYGKVHFTELTDKWVANPLSDYEEGQ 3998
            +     I EGD LGGRISKIL GVGGL VQ+GP+++G+VHFTE+ D WV +PL  + EGQ
Sbjct: 1227 DDDTLFIHEGDILGGRISKILPGVGGLRVQLGPYVFGRVHFTEINDSWVPDPLDGFREGQ 1286

Query: 3999 FVKCKVLEISRSVTGNVHFDLSLRGFRDGTQILN--SSGVQNDQEFPTTRYEKIEKLQKN 4172
            FVKCKVLEIS S  G    +LSLR   DG    +  S  ++N+      R+E+IE L  +
Sbjct: 1287 FVKCKVLEISSSSKGTWQIELSLRTSLDGMSSADHLSEDLKNNDNV-CKRFERIEDLSPD 1345

Query: 4173 MIVQGFVKNVMSKGCFIMLSRKVDAKVLISNLSNGFVENPEKEFPVGKLVQGKVLSVEPL 4352
            M VQG+VKN MSKGCFI+LSR V+AKV +SNL + FV+ PEKEFPVGKLV G+VL+VEPL
Sbjct: 1346 MGVQGYVKNTMSKGCFIILSRTVEAKVRLSNLCDTFVKEPEKEFPVGKLVTGRVLNVEPL 1405

Query: 4353 SKRVEVTLKTESGVESSDTRRGDFSSLQVGDVISGSIKRIESFGLFITLEHTNMVGLCHV 4532
            SKR+EVTLKT +      +   D   L VGD+ISG I+R+E FGLFI ++ T MVGLCH+
Sbjct: 1406 SKRIEVTLKTVNAGGRPKSESYDLKKLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCHI 1465

Query: 4533 SEVSDEQTEDIDSKYRVGERVVAKILKVDTERHRISLGMRKSYLTNDSDD--HELLDQYT 4706
            S++SD++ E++ ++Y+ GE V AKILK+D E+ RISLGM+ SYL N  DD    L +  T
Sbjct: 1466 SQLSDDRMENVQARYKAGESVRAKILKLDEEKKRISLGMKSSYLMNGDDDKAQPLSEDNT 1525

Query: 4707 VXXXXXXXXXXXXXXXXVEN----GSANGIYPDLAYVASRASIPPLEVTLDDMEGSDPGD 4874
                             V++     ++ G    LA V SRASIPPLEV LDD+E +D   
Sbjct: 1526 SMECDPINDPKSEVLAAVDDFGFQETSGGTSLVLAQVESRASIPPLEVDLDDIEETDFDS 1585

Query: 4875 FGGENQEHLNEASTTTXXXXXXXXXXXXXXXXXXXXXXXQRLLEKDIPRTADEFDKLVRS 5054
               +NQE L  A+                           RLLE   P  ADEF+KLVRS
Sbjct: 1586 --SQNQEKLLGANKDEKSKRREKQKDKEEREKKIQAAEG-RLLEHHAPENADEFEKLVRS 1642

Query: 5055 SPNSSFLWIKYMAFMLSLGEIENARAIAKRALATISFREEAEKLNVWVAYFNLENEYGNP 5234
            SPNSSF+WIKYMAFMLSL +IE AR+IA+RAL TI+ REE EKLN+WVAYFNLENE+GNP
Sbjct: 1643 SPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEEEKLNIWVAYFNLENEHGNP 1702

Query: 5235 PEEAVAKVFKEALQYCDREKVHLALLGVYERTDQYKLADELLDQMVKKYKKSCEVWLRRI 5414
            PEE+V KVF+ A QYCD +KV+LALLGVYERT+QYKLAD+LLD+M+KK+K+SC++WLR+I
Sbjct: 1703 PEESVKKVFERARQYCDPKKVYLALLGVYERTEQYKLADKLLDEMIKKFKQSCKIWLRKI 1762

Query: 5415 KSHLKQGKDGIDAIVKDALHKLDKHEHIKFKSQTAILAFKCGVPDTGRSMFELLLRENPN 5594
            +S LKQ ++ I ++V  AL  L +H+HIKF SQTAIL FKCGV D GRS+FE +LRE P 
Sbjct: 1763 QSSLKQNEEAIQSVVNRALLCLPRHKHIKFISQTAILEFKCGVADRGRSLFEGVLREYPK 1822

Query: 5595 RTDLWNIYLDQEIRLGDEEVIRALFERATXXXXXXXXXXXXXXXYLEYEKGHGDEDRVEY 5774
            RTDLW++YLDQEIRLG+++VIR+LFERA                +LEYEK  GDE+RVEY
Sbjct: 1823 RTDLWSVYLDQEIRLGEDDVIRSLFERAISLSLPPKKMKFLFKKFLEYEKSVGDEERVEY 1882

Query: 5775 VKRKAIECVENSLA 5816
            VK++A+E   ++LA
Sbjct: 1883 VKQRAMEYANSTLA 1896