BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002014
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE55720.1| hypothetical protein OsJ_04192 [Oryza sativa Japo...    63   2e-08
gb|EAY76601.1| hypothetical protein OsI_04550 [Oryza sativa Indi...    63   2e-08
ref|NP_001044899.2| Os01g0865600 [Oryza sativa Japonica Group] g...    63   2e-08
ref|XP_004139141.1| PREDICTED: transcription factor LHW-like [Cu...    62   5e-08
gb|ABN06178.1| Helix-loop-helix DNA-binding [Medicago truncatula]      62   5e-08

>gb|EEE55720.1| hypothetical protein OsJ_04192 [Oryza sativa Japonica Group]
          Length = 904

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = -3

Query: 134 PVIASFKRIYFLADNFDGGATWAFEVGS*SMGCPIIVEDLNTPR 3
           P I S +    L DNF+GGATWAFEVG+ SM CPIIVEDLN PR
Sbjct: 759 PKIVSHEEGLLLKDNFEGGATWAFEVGTRSMTCPIIVEDLNPPR 802


>gb|EAY76601.1| hypothetical protein OsI_04550 [Oryza sativa Indica Group]
          Length = 895

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = -3

Query: 134 PVIASFKRIYFLADNFDGGATWAFEVGS*SMGCPIIVEDLNTPR 3
           P I S +    L DNF+GGATWAFEVG+ SM CPIIVEDLN PR
Sbjct: 750 PKIVSHEEGLLLKDNFEGGATWAFEVGTRSMTCPIIVEDLNPPR 793


>ref|NP_001044899.2| Os01g0865600 [Oryza sativa Japonica Group]
           gi|56785189|dbj|BAD81907.1| bHLH transcription
           factor-like protein [Oryza sativa Japonica Group]
           gi|215695529|dbj|BAG90720.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255673901|dbj|BAF06813.2| Os01g0865600 [Oryza sativa
           Japonica Group]
          Length = 904

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = -3

Query: 134 PVIASFKRIYFLADNFDGGATWAFEVGS*SMGCPIIVEDLNTPR 3
           P I S +    L DNF+GGATWAFEVG+ SM CPIIVEDLN PR
Sbjct: 759 PKIVSHEEGLLLKDNFEGGATWAFEVGTRSMTCPIIVEDLNPPR 802


>ref|XP_004139141.1| PREDICTED: transcription factor LHW-like [Cucumis sativus]
           gi|449476328|ref|XP_004154707.1| PREDICTED:
           transcription factor LHW-like [Cucumis sativus]
          Length = 959

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -3

Query: 104 FLADNFDGGATWAFEVGS*SMGCPIIVEDLNTPR 3
           FL DNF+GGATWAFEVGS +M CPIIVEDLN PR
Sbjct: 820 FLKDNFEGGATWAFEVGSQTMVCPIIVEDLNPPR 853


>gb|ABN06178.1| Helix-loop-helix DNA-binding [Medicago truncatula]
          Length = 589

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -3

Query: 101 LADNFDGGATWAFEVGS*SMGCPIIVEDLNTPR 3
           L DNF+GGATWA+EVGS SM CPIIVEDLNTPR
Sbjct: 465 LKDNFEGGATWAYEVGSQSMVCPIIVEDLNTPR 497