BLASTX nr result

ID: Coptis24_contig00002013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002013
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527998.1| conserved hypothetical protein [Ricinus comm...    64   5e-11
ref|XP_002330831.1| predicted protein [Populus trichocarpa] gi|2...    63   8e-11
ref|XP_003527815.1| PREDICTED: uncharacterized protein LOC100804...    61   4e-10
ref|XP_003551145.1| PREDICTED: uncharacterized protein LOC100775...    58   7e-10
ref|XP_003545561.1| PREDICTED: uncharacterized protein LOC100783...    55   5e-09

>ref|XP_002527998.1| conserved hypothetical protein [Ricinus communis]
           gi|223532624|gb|EEF34410.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 436

 Score = 63.5 bits (153), Expect(2) = 5e-11
 Identities = 38/79 (48%), Positives = 51/79 (64%)
 Frame = -3

Query: 324 CVMGATRITHRAQGIVSIASRWHMLATYGTSTNINTLTTKDLMADANGSPESNCVDDLES 145
           C++GA RITHRAQGIVSIA+RWHM+    TS +  +   K L+ + + S ++   DD + 
Sbjct: 320 CLLGAARITHRAQGIVSIATRWHMMV---TSASSRSEQGKCLVRETDDSIQT---DDADP 373

Query: 144 SDAFITTPQDTSLFRTRLA 88
            D FIT  QD S F+TR A
Sbjct: 374 PDIFIT--QDASSFQTRQA 390



 Score = 28.5 bits (62), Expect(2) = 5e-11
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 358 VCSAVQLSGFFMC 320
           +CS VQLSGFF+C
Sbjct: 308 ICSVVQLSGFFLC 320


>ref|XP_002330831.1| predicted protein [Populus trichocarpa] gi|222872633|gb|EEF09764.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score = 63.2 bits (152), Expect(2) = 8e-11
 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
 Frame = -3

Query: 324 CVMGATRITHRAQGIVSIASRWHMLATYGTSTNINTLTTKDLMADANGSPESNCVD-DLE 148
           C++GA RITHRAQGIVS+A+RWHM+     S +      K  + +A+G+  SN  D + +
Sbjct: 284 CLLGAARITHRAQGIVSMATRWHMIVA-SASASARIDQGKSHVPEADGTLASNTEDSESD 342

Query: 147 SSDAFIT-TPQDTSLFRTRLAL 85
           SSD FI  + QD   F+TR AL
Sbjct: 343 SSDNFIAISSQDPCSFQTRQAL 364



 Score = 28.1 bits (61), Expect(2) = 8e-11
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 358 VCSAVQLSGFFMC 320
           +CSAVQL GFF+C
Sbjct: 272 ICSAVQLCGFFLC 284


>ref|XP_003527815.1| PREDICTED: uncharacterized protein LOC100804399 [Glycine max]
          Length = 437

 Score = 60.8 bits (146), Expect(2) = 4e-10
 Identities = 35/80 (43%), Positives = 50/80 (62%)
 Frame = -3

Query: 324 CVMGATRITHRAQGIVSIASRWHMLATYGTSTNINTLTTKDLMADANGSPESNCVDDLES 145
           C+MGA RITHRAQGIVSIA++WHM+ T  ++ + +    K  M +   SP ++   D +S
Sbjct: 321 CLMGAARITHRAQGIVSIATKWHMVVTNASAESEH---WKTQMPEGLPSPTAS---DSDS 374

Query: 144 SDAFITTPQDTSLFRTRLAL 85
           SD +I+       F+TR AL
Sbjct: 375 SDIYISVTTQGPSFQTRQAL 394



 Score = 28.1 bits (61), Expect(2) = 4e-10
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 358 VCSAVQLSGFFMC 320
           +CSAVQL GFF+C
Sbjct: 309 ICSAVQLCGFFLC 321


>ref|XP_003551145.1| PREDICTED: uncharacterized protein LOC100775945 [Glycine max]
          Length = 454

 Score = 58.2 bits (139), Expect(2) = 7e-10
 Identities = 34/80 (42%), Positives = 44/80 (55%)
 Frame = -3

Query: 324 CVMGATRITHRAQGIVSIASRWHMLATYGTSTNINTLTTKDLMADANGSPESNCVDDLES 145
           C++GATRITHRAQGIV+IA+RWHML T  +S       +K   A  +    S+   D  S
Sbjct: 336 CILGATRITHRAQGIVAIATRWHMLVTEASS------ESKQCKARVSEGLASDSDSDDSS 389

Query: 144 SDAFITTPQDTSLFRTRLAL 85
           +      P   S F+TR  L
Sbjct: 390 NIHVSVIPSQLSSFQTRQTL 409



 Score = 30.0 bits (66), Expect(2) = 7e-10
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -2

Query: 358 VCSAVQLSGFFMC 320
           +CSAVQLSGFF+C
Sbjct: 324 ICSAVQLSGFFLC 336


>ref|XP_003545561.1| PREDICTED: uncharacterized protein LOC100783743 [Glycine max]
          Length = 455

 Score = 55.1 bits (131), Expect(2) = 5e-09
 Identities = 31/80 (38%), Positives = 48/80 (60%)
 Frame = -3

Query: 324 CVMGATRITHRAQGIVSIASRWHMLATYGTSTNINTLTTKDLMADANGSPESNCVDDLES 145
           C++GA RITHRAQGIV+IA+RWHML T  ++ + +    +  +++   S + +  DD  +
Sbjct: 335 CILGAARITHRAQGIVAIATRWHMLVTTASAESEH---CEAQVSEGLASDDDSDSDDSSN 391

Query: 144 SDAFITTPQDTSLFRTRLAL 85
               +  PQ  S F+TR  L
Sbjct: 392 IHVSVIPPQ-LSSFQTRQTL 410



 Score = 30.0 bits (66), Expect(2) = 5e-09
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -2

Query: 358 VCSAVQLSGFFMC 320
           +CSAVQLSGFF+C
Sbjct: 323 ICSAVQLSGFFLC 335


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