BLASTX nr result
ID: Coptis24_contig00002013
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002013 (437 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527998.1| conserved hypothetical protein [Ricinus comm... 64 5e-11 ref|XP_002330831.1| predicted protein [Populus trichocarpa] gi|2... 63 8e-11 ref|XP_003527815.1| PREDICTED: uncharacterized protein LOC100804... 61 4e-10 ref|XP_003551145.1| PREDICTED: uncharacterized protein LOC100775... 58 7e-10 ref|XP_003545561.1| PREDICTED: uncharacterized protein LOC100783... 55 5e-09 >ref|XP_002527998.1| conserved hypothetical protein [Ricinus communis] gi|223532624|gb|EEF34410.1| conserved hypothetical protein [Ricinus communis] Length = 436 Score = 63.5 bits (153), Expect(2) = 5e-11 Identities = 38/79 (48%), Positives = 51/79 (64%) Frame = -3 Query: 324 CVMGATRITHRAQGIVSIASRWHMLATYGTSTNINTLTTKDLMADANGSPESNCVDDLES 145 C++GA RITHRAQGIVSIA+RWHM+ TS + + K L+ + + S ++ DD + Sbjct: 320 CLLGAARITHRAQGIVSIATRWHMMV---TSASSRSEQGKCLVRETDDSIQT---DDADP 373 Query: 144 SDAFITTPQDTSLFRTRLA 88 D FIT QD S F+TR A Sbjct: 374 PDIFIT--QDASSFQTRQA 390 Score = 28.5 bits (62), Expect(2) = 5e-11 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -2 Query: 358 VCSAVQLSGFFMC 320 +CS VQLSGFF+C Sbjct: 308 ICSVVQLSGFFLC 320 >ref|XP_002330831.1| predicted protein [Populus trichocarpa] gi|222872633|gb|EEF09764.1| predicted protein [Populus trichocarpa] Length = 409 Score = 63.2 bits (152), Expect(2) = 8e-11 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 2/82 (2%) Frame = -3 Query: 324 CVMGATRITHRAQGIVSIASRWHMLATYGTSTNINTLTTKDLMADANGSPESNCVD-DLE 148 C++GA RITHRAQGIVS+A+RWHM+ S + K + +A+G+ SN D + + Sbjct: 284 CLLGAARITHRAQGIVSMATRWHMIVA-SASASARIDQGKSHVPEADGTLASNTEDSESD 342 Query: 147 SSDAFIT-TPQDTSLFRTRLAL 85 SSD FI + QD F+TR AL Sbjct: 343 SSDNFIAISSQDPCSFQTRQAL 364 Score = 28.1 bits (61), Expect(2) = 8e-11 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -2 Query: 358 VCSAVQLSGFFMC 320 +CSAVQL GFF+C Sbjct: 272 ICSAVQLCGFFLC 284 >ref|XP_003527815.1| PREDICTED: uncharacterized protein LOC100804399 [Glycine max] Length = 437 Score = 60.8 bits (146), Expect(2) = 4e-10 Identities = 35/80 (43%), Positives = 50/80 (62%) Frame = -3 Query: 324 CVMGATRITHRAQGIVSIASRWHMLATYGTSTNINTLTTKDLMADANGSPESNCVDDLES 145 C+MGA RITHRAQGIVSIA++WHM+ T ++ + + K M + SP ++ D +S Sbjct: 321 CLMGAARITHRAQGIVSIATKWHMVVTNASAESEH---WKTQMPEGLPSPTAS---DSDS 374 Query: 144 SDAFITTPQDTSLFRTRLAL 85 SD +I+ F+TR AL Sbjct: 375 SDIYISVTTQGPSFQTRQAL 394 Score = 28.1 bits (61), Expect(2) = 4e-10 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -2 Query: 358 VCSAVQLSGFFMC 320 +CSAVQL GFF+C Sbjct: 309 ICSAVQLCGFFLC 321 >ref|XP_003551145.1| PREDICTED: uncharacterized protein LOC100775945 [Glycine max] Length = 454 Score = 58.2 bits (139), Expect(2) = 7e-10 Identities = 34/80 (42%), Positives = 44/80 (55%) Frame = -3 Query: 324 CVMGATRITHRAQGIVSIASRWHMLATYGTSTNINTLTTKDLMADANGSPESNCVDDLES 145 C++GATRITHRAQGIV+IA+RWHML T +S +K A + S+ D S Sbjct: 336 CILGATRITHRAQGIVAIATRWHMLVTEASS------ESKQCKARVSEGLASDSDSDDSS 389 Query: 144 SDAFITTPQDTSLFRTRLAL 85 + P S F+TR L Sbjct: 390 NIHVSVIPSQLSSFQTRQTL 409 Score = 30.0 bits (66), Expect(2) = 7e-10 Identities = 11/13 (84%), Positives = 13/13 (100%) Frame = -2 Query: 358 VCSAVQLSGFFMC 320 +CSAVQLSGFF+C Sbjct: 324 ICSAVQLSGFFLC 336 >ref|XP_003545561.1| PREDICTED: uncharacterized protein LOC100783743 [Glycine max] Length = 455 Score = 55.1 bits (131), Expect(2) = 5e-09 Identities = 31/80 (38%), Positives = 48/80 (60%) Frame = -3 Query: 324 CVMGATRITHRAQGIVSIASRWHMLATYGTSTNINTLTTKDLMADANGSPESNCVDDLES 145 C++GA RITHRAQGIV+IA+RWHML T ++ + + + +++ S + + DD + Sbjct: 335 CILGAARITHRAQGIVAIATRWHMLVTTASAESEH---CEAQVSEGLASDDDSDSDDSSN 391 Query: 144 SDAFITTPQDTSLFRTRLAL 85 + PQ S F+TR L Sbjct: 392 IHVSVIPPQ-LSSFQTRQTL 410 Score = 30.0 bits (66), Expect(2) = 5e-09 Identities = 11/13 (84%), Positives = 13/13 (100%) Frame = -2 Query: 358 VCSAVQLSGFFMC 320 +CSAVQLSGFF+C Sbjct: 323 ICSAVQLSGFFLC 335