BLASTX nr result

ID: Coptis24_contig00002003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002003
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306974.1| predicted protein [Populus trichocarpa] gi|2...   193   2e-47
ref|XP_002285934.1| PREDICTED: uncharacterized protein LOC100264...   189   2e-46
ref|XP_002301923.1| predicted protein [Populus trichocarpa] gi|2...   178   6e-43
ref|XP_002510670.1| conserved hypothetical protein [Ricinus comm...   174   1e-41
gb|ADN33991.1| hypothetical protein [Cucumis melo subsp. melo]        167   1e-39

>ref|XP_002306974.1| predicted protein [Populus trichocarpa] gi|222856423|gb|EEE93970.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  193 bits (490), Expect = 2e-47
 Identities = 108/198 (54%), Positives = 136/198 (68%), Gaps = 1/198 (0%)
 Frame = +3

Query: 15  RKPPLAEAVNRIPSRRVLRSNDSLIPTTPVSLMKAPVPNRLANVEESDLRPEDQSISCDL 194
           RKPPLA++  RI  RRVLRS  + + T P SL K+  PNR  + E+SDLRPE  SISC+L
Sbjct: 8   RKPPLAKSPIRIRPRRVLRSESTTLQTPPGSLTKSQKPNRKLDTEDSDLRPEYHSISCEL 67

Query: 195 QALAKMVEDEFGNQNLGNLGTASNNISTFSMDPSVVYERGRFYDEYSARRNERLKRKKGV 374
           +ALAKMV DEFGN    N G   +     S + S ++ERGRFY+EYSARRN+RLKRKKG 
Sbjct: 68  RALAKMVRDEFGNGESTNGGVGKS----LSANSSPLFERGRFYEEYSARRNDRLKRKKGD 123

Query: 375 IGQEKKTPYGLGVTMESAKKSNSKRFESVRKSLPSNFSLSRTETPIVAPRYSLRSSCKEN 554
            G + KTPY LGVT+ES+K+  +++ ES RKS+     + R ET    PRY LRS  KEN
Sbjct: 124 TGDDMKTPYNLGVTVESSKRRYTRKLESARKSVSDACLVERNET----PRYLLRSMNKEN 179

Query: 555 KKPPL-AGNFDKSLIDGE 605
           KKPPL   +F+KS++ GE
Sbjct: 180 KKPPLPVYSFEKSVLAGE 197


>ref|XP_002285934.1| PREDICTED: uncharacterized protein LOC100264304 [Vitis vinifera]
           gi|302141661|emb|CBI18864.3| unnamed protein product
           [Vitis vinifera]
          Length = 205

 Score =  189 bits (481), Expect = 2e-46
 Identities = 106/196 (54%), Positives = 137/196 (69%)
 Frame = +3

Query: 18  KPPLAEAVNRIPSRRVLRSNDSLIPTTPVSLMKAPVPNRLANVEESDLRPEDQSISCDLQ 197
           KPPL  +  ++ SRRVLRS+ + I T P SL K    NR   +EES LRPE  +ISC+LQ
Sbjct: 9   KPPLGNSPIQLRSRRVLRSSATTIQTPPGSLTKTL--NRTQVIEESGLRPEYLTISCELQ 66

Query: 198 ALAKMVEDEFGNQNLGNLGTASNNISTFSMDPSVVYERGRFYDEYSARRNERLKRKKGVI 377
           ALAK+V +E GN +  N+G  +    TF  + S ++ERGRFYDEYSARRNERLKRKKG  
Sbjct: 67  ALAKIVRNELGNGSSENVGFPN----TFGANSSPLFERGRFYDEYSARRNERLKRKKGET 122

Query: 378 GQEKKTPYGLGVTMESAKKSNSKRFESVRKSLPSNFSLSRTETPIVAPRYSLRSSCKENK 557
           G   KTPY LGVT+E +K+ ++K+FES+RKS+P+  S+ R+E     PRY LRSS KENK
Sbjct: 123 GDVGKTPYKLGVTVEPSKRRDTKKFESLRKSVPAALSVDRSEN----PRYLLRSSTKENK 178

Query: 558 KPPLAGNFDKSLIDGE 605
           KPP+  N +KS + G+
Sbjct: 179 KPPMPFNVEKSAVAGD 194


>ref|XP_002301923.1| predicted protein [Populus trichocarpa] gi|222843649|gb|EEE81196.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  178 bits (452), Expect = 6e-43
 Identities = 102/197 (51%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
 Frame = +3

Query: 18  KPPLAEAVNRIPSRRVLRSNDSLIPTTPVSLMKAPVPNRLANVEESDLRPEDQSISCDLQ 197
           KPPLA++  R+  RR +RS  +   T P SL K+  PNR  ++EESDLRPE QSIS +L+
Sbjct: 9   KPPLAKSPTRLRPRRSIRSESTTSQTPPGSLAKSQRPNRKWDMEESDLRPEYQSISWELR 68

Query: 198 ALAKMVEDEFGNQNLGNLGTASNNISTFSMDPSVVYERGRFYDEYSARRNERLKRKKGVI 377
           ALAKM   EFGN    N G   +     S + S ++ERGRFY+EYS RRNERLKRKKG  
Sbjct: 69  ALAKMARGEFGNGESSNGGVGRS----LSANSSPLFERGRFYEEYSVRRNERLKRKKGDT 124

Query: 378 GQEKKTPYGLGVTMESAKKSNSKRFESVRKSLPSNFSLSRTETPIVAPRYSLRSSCKENK 557
           G E KTP  LGVT+ES+K+ +SK+ ES+RKS+ + + + R E      RY LRS  KENK
Sbjct: 125 GNEVKTPCNLGVTIESSKRRDSKKLESLRKSVSAAYCVERNEN----SRYMLRSMNKENK 180

Query: 558 KPPL-AGNFDKSLIDGE 605
           KPPL   N++KS++  E
Sbjct: 181 KPPLPVYNYEKSVLASE 197


>ref|XP_002510670.1| conserved hypothetical protein [Ricinus communis]
           gi|223551371|gb|EEF52857.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 206

 Score =  174 bits (440), Expect = 1e-41
 Identities = 100/199 (50%), Positives = 138/199 (69%), Gaps = 2/199 (1%)
 Frame = +3

Query: 15  RKPPLAEAVNRIPSRRVLRSNDSL-IPTTPVSLMKAPVPNRLANVEESDLRPEDQSISCD 191
           RKPPLA++  R+   RVLRS  +  + + P SL+K+   N   ++EE DLRPE +SIS +
Sbjct: 5   RKPPLAKSPIRVRPGRVLRSTTTTSLQSPPGSLIKSQKLNPGPDMEELDLRPEYRSISWE 64

Query: 192 LQALAKMVEDEFGNQNLGNLGTASNNISTFSMDPSVVYERGRFYDEYSARRNERLKRKKG 371
           L+ALA+MV+DEFG +N  N G       + S + S ++ERGRFYD YSARRNERLKRK G
Sbjct: 65  LRALARMVQDEFGKENATNAGER----KSLSANSSPLFERGRFYDVYSARRNERLKRKTG 120

Query: 372 VIGQE-KKTPYGLGVTMESAKKSNSKRFESVRKSLPSNFSLSRTETPIVAPRYSLRSSCK 548
             G+E  KTP+ LGV +ES+KK ++K+ +S+RKS+ + +S+  +E     PRYSLRS  K
Sbjct: 121 ETGEEGVKTPHNLGVNIESSKKRDTKKLQSLRKSVSAAYSVESSE----IPRYSLRSLSK 176

Query: 549 ENKKPPLAGNFDKSLIDGE 605
           ENKKPPL  N++KS++  E
Sbjct: 177 ENKKPPLPVNYEKSVLANE 195


>gb|ADN33991.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 212

 Score =  167 bits (424), Expect = 1e-39
 Identities = 103/200 (51%), Positives = 137/200 (68%), Gaps = 4/200 (2%)
 Frame = +3

Query: 15  RKPPLAEAVNRIPSRRVLRSNDSL-IPTTPVSLMKAPVPNRLANVEESDLRPEDQSISCD 191
           R+PPLA +  R+ SRRV +SN +  I T P SL K+    R ++++ES+LRPE ++ISC+
Sbjct: 8   RRPPLARSPLRLRSRRVPQSNSTTSIQTPPGSLTKSQKMIRPSDLQESELRPEYRTISCE 67

Query: 192 LQALAKMVEDEFGNQNLGNLGTASNNIST-FSMDPSVVYERGRFYDEYSARRNERL-KRK 365
           L+ALA MV  E     LG + +  N +    S++ S ++ERGRFYDEYSARRNERL KRK
Sbjct: 68  LRALASMVRME-----LGCIESEGNGVGDKLSVNSSSLFERGRFYDEYSARRNERLKKRK 122

Query: 366 KGVIGQEKKTPYGLGVTMESAKKSNSKRF-ESVRKSLPSNFSLSRTETPIVAPRYSLRSS 542
           K     E KTPY LGVT+ES+K+ +SK+   S+RKS+ + +S  R+ET   APRY LRS 
Sbjct: 123 KAETVAEVKTPYNLGVTVESSKRQSSKKLVNSLRKSVSAAYSAERSET---APRYLLRSM 179

Query: 543 CKENKKPPLAGNFDKSLIDG 602
            KENKKPPL  N +KS+I G
Sbjct: 180 MKENKKPPLPVNLEKSMIGG 199


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