BLASTX nr result

ID: Coptis24_contig00001990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001990
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-30
ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-27
ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus co...    93   3e-27
ref|XP_002306321.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-20
ref|NP_001241410.1| uncharacterized protein LOC100811478 [Glycin...    62   7e-17

>ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|222852893|gb|EEE90440.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 96.7 bits (239), Expect(2) = 2e-30
 Identities = 48/91 (52%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
 Frame = -3

Query: 413 RYHPDVVPSSRKEESTKKFVELQQAYETLSNPISRQKYDFELGYLSRCG--MNGMRSEEW 240
           +YHPDV P S KEESTK+FVELQ+AYETLS+PI+R+ YD ELG ++  G    G+ SE+ 
Sbjct: 76  QYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLELGMVNSVGFAFEGLPSEDR 135

Query: 239 RTHFHKQVWEDQLGGLELKSNSKKFRNNRAY 147
           ++ F ++VWE QL GL  +S ++  R N  Y
Sbjct: 136 KSSFPREVWERQLHGLYQRSYARVERRNNGY 166



 Score = 62.0 bits (149), Expect(2) = 2e-30
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = -1

Query: 706 EMFCNLNPAHMHAPIFSTRRSSFQKTAKFNLISCRANTLETQ-RVGTSFYELLSLESQNV 530
           EM   ++P   +      ++ S QK+ K   I C+  T E   R   +FYE+LSL SQNV
Sbjct: 2   EMSLQVSPRTANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQNV 61

Query: 529 GFEDIKKAYRTMARRYHP 476
           GF++IKKAYR+MA +YHP
Sbjct: 62  GFDEIKKAYRSMALQYHP 79


>ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|222837896|gb|EEE76261.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 87.8 bits (216), Expect(2) = 1e-27
 Identities = 46/89 (51%), Positives = 60/89 (67%)
 Frame = -3

Query: 413 RYHPDVVPSSRKEESTKKFVELQQAYETLSNPISRQKYDFELGYLSRCGMNGMRSEEWRT 234
           +YHPDV P S KEESTK+FVELQ+AYETLS+PI+R+ YD EL         G+ SE+ + 
Sbjct: 76  QYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLEL---------GLPSEDRKN 126

Query: 233 HFHKQVWEDQLGGLELKSNSKKFRNNRAY 147
            F ++VWE QL GL  +S ++  R N  Y
Sbjct: 127 SFPREVWERQLHGLYQRSYARVERWNNGY 155



 Score = 62.0 bits (149), Expect(2) = 1e-27
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = -1

Query: 706 EMFCNLNPAHMHAPIFSTRRSSFQKTAKFNLISCRANTLETQ-RVGTSFYELLSLESQNV 530
           EM   ++P   +      ++ S QK+ K   I C+  T E   R   +FYE+LSL SQNV
Sbjct: 2   EMSLQVSPRTANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQNV 61

Query: 529 GFEDIKKAYRTMARRYHP 476
           GF++IKKAYR+MA +YHP
Sbjct: 62  GFDEIKKAYRSMALQYHP 79


>ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus communis]
           gi|223531559|gb|EEF33388.1| chaperone protein DNAj,
           putative [Ricinus communis]
          Length = 165

 Score = 93.2 bits (230), Expect(2) = 3e-27
 Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
 Frame = -3

Query: 413 RYHPDVVPSSRKEESTKKFVELQQAYETLSNPISRQKYDFELGYLSRCGMN-GMRSEEWR 237
           ++HPDV   S KEESTK+FVELQ+AYETLS+P+SR+ YD+EL  ++  G+   +R EE +
Sbjct: 75  QFHPDVCRLSAKEESTKRFVELQKAYETLSDPVSRRLYDYELNLVASIGLGLEIRMEERK 134

Query: 236 THFHKQVWEDQLGGLELKSNSKKFRNNRAYM 144
             F K+VWE QL GL  +S+ +  R N+ YM
Sbjct: 135 NSFPKEVWEMQLYGLSQRSHIRLQRKNKKYM 165



 Score = 55.1 bits (131), Expect(2) = 3e-27
 Identities = 26/60 (43%), Positives = 44/60 (73%)
 Frame = -1

Query: 655 TRRSSFQKTAKFNLISCRANTLETQRVGTSFYELLSLESQNVGFEDIKKAYRTMARRYHP 476
           +R+  F   A+   I+C    ++ ++  T+FYE+LSL+S+NVGF++I+KAYR+MA ++HP
Sbjct: 23  SRQKGFHNKAR--TITCSYRIMQEKK--TNFYEVLSLQSKNVGFDEIRKAYRSMALQFHP 78


>ref|XP_002306321.1| predicted protein [Populus trichocarpa] gi|222855770|gb|EEE93317.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 92.8 bits (229), Expect(2) = 2e-20
 Identities = 45/92 (48%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
 Frame = -3

Query: 413 RYHPDVVPSSRKEESTKKFVELQQAYETLSNPISRQKYDFELGYLSRCG--MNGMRSEEW 240
           +YHPDV   S +EESTK+FVELQ+AYETLS+P+SR+ +D+ELG ++  G    G+  E+ 
Sbjct: 27  QYHPDVCTPSAREESTKRFVELQKAYETLSDPVSRRMHDYELGLVNSGGFAFEGLPLEDR 86

Query: 239 RTHFHKQVWEDQLGGLELKSNSKKFRNNRAYM 144
           +  F ++VWE QL GL+ +S ++  R N  YM
Sbjct: 87  KNRFPREVWERQLHGLQQRSYARMERRNNKYM 118



 Score = 32.3 bits (72), Expect(2) = 2e-20
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 553 LSLESQNVGFEDIKKAYRTMARRYHP 476
           L +      F++IKKAYR+MA +YHP
Sbjct: 5   LQVNLNTARFDEIKKAYRSMALQYHP 30


>ref|NP_001241410.1| uncharacterized protein LOC100811478 [Glycine max]
           gi|255639401|gb|ACU19996.1| unknown [Glycine max]
          Length = 188

 Score = 62.0 bits (149), Expect(2) = 7e-17
 Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
 Frame = -3

Query: 413 RYHPDVVPS-SRKEESTKKFVELQQAYETLSNPISRQKYDFELGYLSRCGMNGMRSEEWR 237
           +YHPDV    S KEEST+ FV+L  AYETLSNP  R++YD ELG  S         E WR
Sbjct: 79  QYHPDVCHDPSMKEESTRMFVQLNAAYETLSNPRLREQYDSELGLRSEVMSVSSDHERWR 138

Query: 236 T---HFHKQVWED--QLGGLELKSNSKK 168
           +       + WE   Q   +ELK+ S++
Sbjct: 139 SVSVSSEHERWESRFQEQVIELKTRSRR 166



 Score = 51.2 bits (121), Expect(2) = 7e-17
 Identities = 27/83 (32%), Positives = 44/83 (53%)
 Frame = -1

Query: 724 LSLSQTEMFCNLNPAHMHAPIFSTRRSSFQKTAKFNLISCRANTLETQRVGTSFYELLSL 545
           LSL  +       P   H    S+++     + KF  +SCRA TL  + +    Y++LS+
Sbjct: 4   LSLRSSSSLSMSKPFESHGLPLSSKQHRRPSSVKFGSVSCRATTLTQENL----YKILSV 59

Query: 544 ESQNVGFEDIKKAYRTMARRYHP 476
              +   ++IK+AYR+MA +YHP
Sbjct: 60  SPGSATMDEIKRAYRSMALQYHP 82


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