BLASTX nr result

ID: Coptis24_contig00001981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001981
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320129.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
emb|CBI16718.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_002267542.1| PREDICTED: uncharacterized protein LOC100247...    78   7e-13
ref|XP_002301355.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_003552378.1| PREDICTED: uncharacterized protein LOC100798...    77   2e-12

>ref|XP_002320129.1| predicted protein [Populus trichocarpa] gi|222860902|gb|EEE98444.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/73 (57%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = -3

Query: 452 PDAGYSAESSKGPL-AEEDHEIAAKVTLLNHKISSNISAMPSALKRMNDCNSMMEKLDTY 276
           PD+G    SS+  L  EED + A K  LL  KISSN+SAMP  LKRM DC S ++KL +Y
Sbjct: 87  PDSGGQDTSSRAALLTEEDRKTAEKTHLLKEKISSNVSAMPVVLKRMEDCISKIDKLYSY 146

Query: 275 NVNIHPAFKRKRT 237
           N +IHPAFK+KRT
Sbjct: 147 NGSIHPAFKKKRT 159


>emb|CBI16718.3| unnamed protein product [Vitis vinifera]
          Length = 114

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = -3

Query: 458 GIPDAGYSAESSKGPLAEEDHEIAAKVTLLNHKISSNISAMPSALKRMNDCNSMMEKLDT 279
           G P+ G     S+  LA+ DHE + K+ LL  KISSN+S +P  LKR+N+C SM++KLD+
Sbjct: 44  GEPNPG----QSRVLLAQGDHETSEKIQLLKQKISSNVSTIPVLLKRLNECMSMVDKLDS 99

Query: 278 YNVNIHPAFKRKRT 237
           YN  +HPAFKR+RT
Sbjct: 100 YNGIMHPAFKRRRT 113


>ref|XP_002267542.1| PREDICTED: uncharacterized protein LOC100247850 [Vitis vinifera]
          Length = 146

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = -3

Query: 458 GIPDAGYSAESSKGPLAEEDHEIAAKVTLLNHKISSNISAMPSALKRMNDCNSMMEKLDT 279
           G P+ G     S+  LA+ DHE + K+ LL  KISSN+S +P  LKR+N+C SM++KLD+
Sbjct: 76  GEPNPG----QSRVLLAQGDHETSEKIQLLKQKISSNVSTIPVLLKRLNECMSMVDKLDS 131

Query: 278 YNVNIHPAFKRKRT 237
           YN  +HPAFKR+RT
Sbjct: 132 YNGIMHPAFKRRRT 145


>ref|XP_002301355.1| predicted protein [Populus trichocarpa] gi|222843081|gb|EEE80628.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/81 (50%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
 Frame = -3

Query: 467 SQPG----IPDAGYSAESSKGPLAEEDHEIAAKVTLLNHKISSNISAMPSALKRMNDCNS 300
           S PG    +   G    S    L +ED + A KV LL  KISSN+S MP  LKRM DC S
Sbjct: 80  SDPGPSGELNPGGQDKSSRAALLTKEDRKTAEKVHLLKEKISSNVSTMPVVLKRMKDCIS 139

Query: 299 MMEKLDTYNVNIHPAFKRKRT 237
            + KLD+YN +IHPAFK+K+T
Sbjct: 140 RINKLDSYNGSIHPAFKKKKT 160


>ref|XP_003552378.1| PREDICTED: uncharacterized protein LOC100798294 [Glycine max]
          Length = 133

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/76 (56%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -3

Query: 461 PGIPDAGYSAESSKGPLAEEDHEIAAKVTLLNHKISSNISAMPSALKRMNDCNSMMEKLD 282
           PG  +   S E S    A ED E A K+ LLN KISSN SAMP  LKRM DC + +EK D
Sbjct: 59  PGTSEQNISREESSS--APEDPETAKKLKLLNEKISSNCSAMPIVLKRMKDCIARIEKFD 116

Query: 281 TYNVN-IHPAFKRKRT 237
           +YN + IHPAFKRK+T
Sbjct: 117 SYNDSMIHPAFKRKKT 132