BLASTX nr result

ID: Coptis24_contig00001980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001980
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534120.1| ef-hand calcium binding protein, putative [R...    94   2e-30
ref|XP_003578961.1| PREDICTED: probable calcium-binding protein ...    94   3e-30
ref|NP_001066106.1| Os12g0137100 [Oryza sativa Japonica Group] g...    95   4e-30
emb|CBX24414.1| hypothetical_protein [Oryza glaberrima]                95   4e-30
gb|EEE52738.1| hypothetical protein OsJ_35159 [Oryza sativa Japo...    95   4e-30

>ref|XP_002534120.1| ef-hand calcium binding protein, putative [Ricinus communis]
           gi|223525823|gb|EEF28264.1| ef-hand calcium binding
           protein, putative [Ricinus communis]
          Length = 266

 Score = 94.4 bits (233), Expect(2) = 2e-30
 Identities = 45/54 (83%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   SIFERFDRDRSGKIDSSELQQALLSLGFSVSPVILDLLVSKFDKSGGRNKAIEY 162
           SIFERFDRDRSGKIDS+EL++AL SLGF+VSPV+LDLLVSKFDK+GG++KAIEY
Sbjct: 168 SIFERFDRDRSGKIDSNELREALYSLGFAVSPVVLDLLVSKFDKTGGKSKAIEY 221



 Score = 64.3 bits (155), Expect(2) = 2e-30
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +2

Query: 266 LTEKFKEKDTGYTGSATFTYESFMLTVLPFLIA 364
           LTEKFKEKDT Y+GSATFTYE+FMLTVLPFLIA
Sbjct: 234 LTEKFKEKDTSYSGSATFTYEAFMLTVLPFLIA 266


>ref|XP_003578961.1| PREDICTED: probable calcium-binding protein CML49-like isoform 1
           [Brachypodium distachyon]
           gi|357161050|ref|XP_003578962.1| PREDICTED: probable
           calcium-binding protein CML49-like isoform 2
           [Brachypodium distachyon]
          Length = 327

 Score = 94.4 bits (233), Expect(2) = 3e-30
 Identities = 45/54 (83%), Positives = 51/54 (94%)
 Frame = +1

Query: 1   SIFERFDRDRSGKIDSSELQQALLSLGFSVSPVILDLLVSKFDKSGGRNKAIEY 162
           SIFERFDRDRSGKID+SEL+ ALLSLG+SVSP +LDLLVSKFDK+GG NKA+EY
Sbjct: 229 SIFERFDRDRSGKIDASELRDALLSLGYSVSPTVLDLLVSKFDKTGGMNKAVEY 282



 Score = 63.5 bits (153), Expect(2) = 3e-30
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +2

Query: 266 LTEKFKEKDTGYTGSATFTYESFMLTVLPFLIA 364
           LTEKFKEKDT Y+GSATFTYE+FMLTVLPF+IA
Sbjct: 295 LTEKFKEKDTAYSGSATFTYEAFMLTVLPFIIA 327


>ref|NP_001066106.1| Os12g0137100 [Oryza sativa Japonica Group]
           gi|77552964|gb|ABA95760.1| EF hand family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113648613|dbj|BAF29125.1| Os12g0137100 [Oryza sativa
           Japonica Group] gi|125535715|gb|EAY82203.1| hypothetical
           protein OsI_37406 [Oryza sativa Indica Group]
           gi|215765243|dbj|BAG86940.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 292

 Score = 94.7 bits (234), Expect(2) = 4e-30
 Identities = 45/54 (83%), Positives = 52/54 (96%)
 Frame = +1

Query: 1   SIFERFDRDRSGKIDSSELQQALLSLGFSVSPVILDLLVSKFDKSGGRNKAIEY 162
           SIFERFDRDRSGKID++EL+ ALLSLG+SVSP +LDLLVSKFDK+GG+NKAIEY
Sbjct: 194 SIFERFDRDRSGKIDATELRDALLSLGYSVSPTVLDLLVSKFDKTGGKNKAIEY 247



 Score = 62.8 bits (151), Expect(2) = 4e-30
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +2

Query: 266 LTEKFKEKDTGYTGSATFTYESFMLTVLPFLIA 364
           LTEKFKEKDT ++GSATFTYE+FMLTVLPFLIA
Sbjct: 260 LTEKFKEKDTAFSGSATFTYEAFMLTVLPFLIA 292


>emb|CBX24414.1| hypothetical_protein [Oryza glaberrima]
          Length = 286

 Score = 94.7 bits (234), Expect(2) = 4e-30
 Identities = 45/54 (83%), Positives = 52/54 (96%)
 Frame = +1

Query: 1   SIFERFDRDRSGKIDSSELQQALLSLGFSVSPVILDLLVSKFDKSGGRNKAIEY 162
           SIFERFDRDRSGKID++EL+ ALLSLG+SVSP +LDLLVSKFDK+GG+NKAIEY
Sbjct: 194 SIFERFDRDRSGKIDATELRDALLSLGYSVSPTVLDLLVSKFDKTGGKNKAIEY 247



 Score = 62.8 bits (151), Expect(2) = 4e-30
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +2

Query: 266 LTEKFKEKDTGYTGSATFTYESFMLTVLPFLIA 364
           LTEKFKEKDT ++GSATFTYE+FMLTVLPFLIA
Sbjct: 254 LTEKFKEKDTAFSGSATFTYEAFMLTVLPFLIA 286


>gb|EEE52738.1| hypothetical protein OsJ_35159 [Oryza sativa Japonica Group]
          Length = 263

 Score = 94.7 bits (234), Expect(2) = 4e-30
 Identities = 45/54 (83%), Positives = 52/54 (96%)
 Frame = +1

Query: 1   SIFERFDRDRSGKIDSSELQQALLSLGFSVSPVILDLLVSKFDKSGGRNKAIEY 162
           SIFERFDRDRSGKID++EL+ ALLSLG+SVSP +LDLLVSKFDK+GG+NKAIEY
Sbjct: 165 SIFERFDRDRSGKIDATELRDALLSLGYSVSPTVLDLLVSKFDKTGGKNKAIEY 218



 Score = 62.8 bits (151), Expect(2) = 4e-30
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +2

Query: 266 LTEKFKEKDTGYTGSATFTYESFMLTVLPFLIA 364
           LTEKFKEKDT ++GSATFTYE+FMLTVLPFLIA
Sbjct: 231 LTEKFKEKDTAFSGSATFTYEAFMLTVLPFLIA 263


Top