BLASTX nr result
ID: Coptis24_contig00001974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001974
(1711 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34243.3| unnamed protein product [Vitis vinifera] 256 1e-65
emb|CBI26110.3| unnamed protein product [Vitis vinifera] 256 1e-65
ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding prote... 256 1e-65
ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding prote... 252 2e-64
ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus c... 239 1e-60
>emb|CBI34243.3| unnamed protein product [Vitis vinifera]
Length = 551
Score = 256 bits (655), Expect = 1e-65
Identities = 194/490 (39%), Positives = 246/490 (50%), Gaps = 10/490 (2%)
Frame = +1
Query: 25 DDSGLYKNLLQELTRKEGFSLPVYTTTRFGESHVATFTSTVEVEGDIFHGVXXXXXXXXX 204
D++G+YKNLLQE + G +LPVYTT R G HV F+ TVE+ G F G
Sbjct: 83 DETGVYKNLLQETAHRAGLNLPVYTTIRSGPGHVPVFSCTVEIAGMSFTGEAAKTKKQAQ 142
Query: 205 XXXXXXXWSTLKELPHLQXXXXXLPKLEVERKDEQEQVVVARALAKLCPPDMKRSTIQND 384
WS L++L Q P +E E +EQEQV++AR LA L P K + QND
Sbjct: 143 KNAAMTAWSALRKLS--QRGSPSSPSVESECNEEQEQVIIARVLASLRP--SKSNNKQND 198
Query: 385 RHSVRQRSAPVHRD---MKPARSGMHLYPVPYPSWPYLHCTPEMTMYQLWQPEQVSQQQN 555
R +QRS + RD P M PS+ PEM MYQ+WQ EQ++Q QN
Sbjct: 199 RQHGQQRSGSICRDSTPQTPISCSMQYQSTVDPSF-----FPEMAMYQMWQQEQLAQLQN 253
Query: 556 RIITLPVAQSP-PVPQILPFVHSIFQPDHGQYIIARDQKPISGG--IPMAAPGPSNLFSN 726
R++ LPV +P P P PF+ S+F+PDH Y Q+PI+ G +AA G S SN
Sbjct: 254 RLLALPVPLAPQPSPHFFPFMQSMFRPDHCLYFPTEVQQPITMGPRFSIAASGSSFYLSN 313
Query: 727 CTMPIQVRSRSHVTIQEIHEERPKGEDDWLRGDTNSNCHKVEVQSNSSVLPQFEVQNLSA 906
+P +R RS VTIQEI E + + S EV SV P N A
Sbjct: 314 HLVPEPMRGRSMVTIQEIEE----------KTEERSEFSPSEV----SVSPALGDNNTEA 359
Query: 907 SNKSRPEPLLQNEPHEDQKSGKLNIGHSKLEGTQSELSKWPSQSPMDTASRSEATSPGRT 1086
N+ EP+ ++ ++ G +LE Q W T+ RS + G
Sbjct: 360 INQ---EPIQEDNKQNTEELGGKIATSVQLERNQPGQFGW-------TSRRSVDSRLGPI 409
Query: 1087 EIFLGSSGGFDSSRSK-LPQHPSGPSSLGVAKYCSQSSNAAPVRIRTVGPVSSVSPRPES 1263
E L GFDSS+S P HP G SS ++ S+ AAPV RT PVSSV RP++
Sbjct: 410 EFQLQRPHGFDSSQSNPRPYHPPGLSSYRSSR--PPSTVAAPVMTRTGDPVSSVGLRPQN 467
Query: 1264 LNPWVPASATFRTAAPACSARPR--LMKIGATPSHHFMAPAVQIRSVVPVCSAPPA-KLP 1434
L +PA RT P S RPR M G P MAPAVQIR+VVPVCSAPPA K+P
Sbjct: 468 LANQMPAPPRMRTGIPPYSFRPRPERMDFGRGPP-RAMAPAVQIRTVVPVCSAPPARKIP 526
Query: 1435 ESSQKVLHSI 1464
S K + SI
Sbjct: 527 RPSSKEMTSI 536
>emb|CBI26110.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 256 bits (654), Expect = 1e-65
Identities = 181/478 (37%), Positives = 237/478 (49%), Gaps = 10/478 (2%)
Frame = +1
Query: 25 DDSGLYKNLLQELTRKEGFSLPVYTTTRFGESHVATFTSTVEVEGDIFHGVXXXXXXXXX 204
D++G+YKNLLQE + G LPVYTT R G H+ F TV++ F G
Sbjct: 83 DETGVYKNLLQETAHRAGLKLPVYTTVRSGPGHIPVFFCTVDIAKMSFTGEPAKTKKQAQ 142
Query: 205 XXXXXXXWSTLKELPHLQXXXXXLPKLEVERKDEQEQVVVARALAKLCPPDMKRSTIQND 384
WS LK L P LE DE EQV VAR LA L PP+ +S Q D
Sbjct: 143 KNAAMAAWSALKRLSQASSSTSSAP-LESGGNDELEQVTVARYLASLQPPEANKSA-QRD 200
Query: 385 RHSVRQRSAPVHRDMKPARSGMHLYPVPYPSWPYLHCTPEMTM-YQLWQPEQVSQQQNRI 561
+ Q S P RD+ P + + LY + W H P + + +Q W E+ SQQQN +
Sbjct: 201 -GLLGQGSTPCRRDLMPNDNAISLYSMHCRDWS--HSAPLIQLAHQSWPKERASQQQNHL 257
Query: 562 ITLPVAQSP-PVPQILPFVHSIFQPDHGQYIIARDQK--PISGGIPMAAPGPSNLFSNCT 732
+ LP A + P PQ+ P + SIFQPDHG + R+Q+ P+S GI GP FSN +
Sbjct: 258 LALPSAPTTLPRPQMSPIIRSIFQPDHGPCFLPREQEPAPLSPGI-----GPFLYFSNGS 312
Query: 733 MPIQVRSRSHVTIQEIHEERPKGEDDWLRGDTNSNCHKVEVQSNSSVLPQFEVQNLSASN 912
MP+ V + S VTIQEI EE+PK E +WL D NS C K+ SN S L E+ S
Sbjct: 313 MPVPVSNLSQVTIQEI-EEKPKVEQEWLNVDANSGCWKINFPSNLSGLSLVEIPKCPISP 371
Query: 913 KSRPEPL---LQNEPHEDQKSGKLNIGHSKLEGTQSELSKWPSQSPMDTASRSEATSPGR 1083
S EP+ LQ + E+ +G ++++ W S DT RS A +
Sbjct: 372 NSHSEPIQEALQGKEEENSAGNSAQLGTNQIQRL-----AWTSPRFADT--RSSAGASDE 424
Query: 1084 TEIFLGSSGGFDSSRSKLPQHPSGPSSLGVAKYCSQSSNAAPVRIRTVGPVSSVSPRPES 1263
++L + D +S + + ++ + +AAPV IR+ S PRP S
Sbjct: 425 ANLWLQNQQFLDYLQSNIRSQNAPMATYPGSSRVYTRPSAAPVTIRSSDASSIRKPRPMS 484
Query: 1264 LNPWVPASATFRTAAPACSARPRL---MKIGATPSHHFMAPAVQIRSVVPVCSAPPAK 1428
+ +V A R AAP S RP L G P FMAPAV IRSVVPVCSAPPAK
Sbjct: 485 SSLFVSAPPPTRYAAPTWSTRPTLEGAKYTGVRPCSRFMAPAVNIRSVVPVCSAPPAK 542
>ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
vinifera]
Length = 563
Score = 256 bits (654), Expect = 1e-65
Identities = 181/478 (37%), Positives = 237/478 (49%), Gaps = 10/478 (2%)
Frame = +1
Query: 25 DDSGLYKNLLQELTRKEGFSLPVYTTTRFGESHVATFTSTVEVEGDIFHGVXXXXXXXXX 204
D++G+YKNLLQE + G LPVYTT R G H+ F TV++ F G
Sbjct: 83 DETGVYKNLLQETAHRAGLKLPVYTTVRSGPGHIPVFFCTVDIAKMSFTGEPAKTKKQAQ 142
Query: 205 XXXXXXXWSTLKELPHLQXXXXXLPKLEVERKDEQEQVVVARALAKLCPPDMKRSTIQND 384
WS LK L P LE DE EQV VAR LA L PP+ +S Q D
Sbjct: 143 KNAAMAAWSALKRLSQASSSTSSAP-LESGGNDELEQVTVARYLASLQPPEANKSA-QRD 200
Query: 385 RHSVRQRSAPVHRDMKPARSGMHLYPVPYPSWPYLHCTPEMTM-YQLWQPEQVSQQQNRI 561
+ Q S P RD+ P + + LY + W H P + + +Q W E+ SQQQN +
Sbjct: 201 -GLLGQGSTPCRRDLMPNDNAISLYSMHCRDWS--HSAPLIQLAHQSWPKERASQQQNHL 257
Query: 562 ITLPVAQSP-PVPQILPFVHSIFQPDHGQYIIARDQK--PISGGIPMAAPGPSNLFSNCT 732
+ LP A + P PQ+ P + SIFQPDHG + R+Q+ P+S GI GP FSN +
Sbjct: 258 LALPSAPTTLPRPQMSPIIRSIFQPDHGPCFLPREQEPAPLSPGI-----GPFLYFSNGS 312
Query: 733 MPIQVRSRSHVTIQEIHEERPKGEDDWLRGDTNSNCHKVEVQSNSSVLPQFEVQNLSASN 912
MP+ V + S VTIQEI EE+PK E +WL D NS C K+ SN S L E+ S
Sbjct: 313 MPVPVSNLSQVTIQEI-EEKPKVEQEWLNVDANSGCWKINFPSNLSGLSLVEIPKCPISP 371
Query: 913 KSRPEPL---LQNEPHEDQKSGKLNIGHSKLEGTQSELSKWPSQSPMDTASRSEATSPGR 1083
S EP+ LQ + E+ +G ++++ W S DT RS A +
Sbjct: 372 NSHSEPIQEALQGKEEENSAGNSAQLGTNQIQRL-----AWTSPRFADT--RSSAGASDE 424
Query: 1084 TEIFLGSSGGFDSSRSKLPQHPSGPSSLGVAKYCSQSSNAAPVRIRTVGPVSSVSPRPES 1263
++L + D +S + + ++ + +AAPV IR+ S PRP S
Sbjct: 425 ANLWLQNQQFLDYLQSNIRSQNAPMATYPGSSRVYTRPSAAPVTIRSSDASSIRKPRPMS 484
Query: 1264 LNPWVPASATFRTAAPACSARPRL---MKIGATPSHHFMAPAVQIRSVVPVCSAPPAK 1428
+ +V A R AAP S RP L G P FMAPAV IRSVVPVCSAPPAK
Sbjct: 485 SSLFVSAPPPTRYAAPTWSTRPTLEGAKYTGVRPCSRFMAPAVNIRSVVPVCSAPPAK 542
>ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding protein 2 [Vitis vinifera]
Length = 532
Score = 252 bits (644), Expect = 2e-64
Identities = 193/487 (39%), Positives = 243/487 (49%), Gaps = 10/487 (2%)
Frame = +1
Query: 25 DDSGLYKNLLQELTRKEGFSLPVYTTTRFGESHVATFTSTVEVEGDIFHGVXXXXXXXXX 204
D++G+YKNLLQE + G +LPVYTT R G HV F+ TVE+ G F G
Sbjct: 83 DETGVYKNLLQETAHRAGLNLPVYTTIRSGPGHVPVFSCTVEIAGMSFTGEAAKTKKQAQ 142
Query: 205 XXXXXXXWSTLKELPHLQXXXXXLPKLEVERKDEQEQVVVARALAKLCPPDMKRSTIQND 384
WS L+ KLE E +EQEQV++AR LA L P K + QND
Sbjct: 143 KNAAMTAWSALR-------------KLESECNEEQEQVIIARVLASLRP--SKSNNKQND 187
Query: 385 RHSVRQRSAPVHRD---MKPARSGMHLYPVPYPSWPYLHCTPEMTMYQLWQPEQVSQQQN 555
R +QRS + RD P M PS+ PEM MYQ+WQ EQ++Q QN
Sbjct: 188 RQHGQQRSGSICRDSTPQTPISCSMQYQSTVDPSF-----FPEMAMYQMWQQEQLAQLQN 242
Query: 556 RIITLPVAQSP-PVPQILPFVHSIFQPDHGQYIIARDQKPISGG--IPMAAPGPSNLFSN 726
R++ LPV +P P P PF+ S+F+PDH Y Q+PI+ G +AA G S SN
Sbjct: 243 RLLALPVPLAPQPSPHFFPFMQSMFRPDHCLYFPTEVQQPITMGPRFSIAASGSSFYLSN 302
Query: 727 CTMPIQVRSRSHVTIQEIHEERPKGEDDWLRGDTNSNCHKVEVQSNSSVLPQFEVQNLSA 906
+P +R RS VTIQEI E + + S EV SV P N A
Sbjct: 303 HLVPEPMRGRSMVTIQEIEE----------KTEERSEFSPSEV----SVSPALGDNNTEA 348
Query: 907 SNKSRPEPLLQNEPHEDQKSGKLNIGHSKLEGTQSELSKWPSQSPMDTASRSEATSPGRT 1086
N+ EP+ ++ ++ G +LE Q W T+ RS + G
Sbjct: 349 INQ---EPIQEDNKQNTEELGGKIATSVQLERNQPGQFGW-------TSRRSVDSRLGPI 398
Query: 1087 EIFLGSSGGFDSSRSK-LPQHPSGPSSLGVAKYCSQSSNAAPVRIRTVGPVSSVSPRPES 1263
E L GFDSS+S P HP G SS ++ S+ AAPV RT PVSSV RP++
Sbjct: 399 EFQLQRPHGFDSSQSNPRPYHPPGLSSYRSSR--PPSTVAAPVMTRTGDPVSSVGLRPQN 456
Query: 1264 LNPWVPASATFRTAAPACSARPR--LMKIGATPSHHFMAPAVQIRSVVPVCSAPPA-KLP 1434
L +PA RT P S RPR M G P MAPAVQIR+VVPVCSAPPA K+P
Sbjct: 457 LANQMPAPPRMRTGIPPYSFRPRPERMDFGRGPP-RAMAPAVQIRTVVPVCSAPPARKIP 515
Query: 1435 ESSQKVL 1455
SSQ+ L
Sbjct: 516 SSSQEGL 522
>ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus communis]
gi|223548237|gb|EEF49728.1| hypothetical protein
RCOM_1429110 [Ricinus communis]
Length = 568
Score = 239 bits (611), Expect = 1e-60
Identities = 187/519 (36%), Positives = 261/519 (50%), Gaps = 17/519 (3%)
Frame = +1
Query: 25 DDSGLYKNLLQELTRKEGFSLPVYTTTRFGESHVATFTSTVEVEGDIFHGVXXXXXXXXX 204
D++G+YKNLLQE + G LPVYTT R G HV F+ TVE+ G F G
Sbjct: 83 DETGVYKNLLQETAHRAGLKLPVYTTVRSGPGHVPVFSCTVELAGMSFTGEPARTKKQAQ 142
Query: 205 XXXXXXXWSTLKEL-PHLQXXXXXLPKLEVERK---DEQEQVVVARALAKLCPPDMKRST 372
WS LK L H L VE + +EQEQVV+AR LA + P ++K +
Sbjct: 143 KNAAMAAWSALKRLVQHGSSSSSSLSSSLVENRKGSEEQEQVVIARFLASVQPSELKINK 202
Query: 373 IQNDRHSVRQRSAPVHRDMKPARSGMHLYPVPYPSWPYLHCTPEMTMYQLWQPEQVSQQQ 552
QND + +R PV +D+ P LYP+ +W Y +PE+ +YQ+WQ EQ+ Q
Sbjct: 203 -QNDCQTGHERFIPVCKDLTPPTPS--LYPMQSQNWAYPSFSPEIAIYQMWQQEQLLQLH 259
Query: 553 NRIITLPVAQS-PPVPQILPFVHSIFQPDHGQYIIARDQK--PISGGIPMAAPGPSNLFS 723
NR++TL V + PP P +LP++ S+ P+ + R Q+ P+ I +A+ GP S
Sbjct: 260 NRLLTLQVPPAPPPAPPMLPYMQSVLPPNSHLFFPLRKQETVPVGPRITIASSGPLLCLS 319
Query: 724 NCTMPIQVRSRSHVTIQEIHEERPKGEDDWLRGDTNSNCHKVEVQSNSSVLPQFEVQNLS 903
+ VR +S VTIQEI+EE+P+ D S S + + NLS
Sbjct: 320 DNVDSDSVRGKSAVTIQEINEEKPEDLSDC---------------SPSIISDPPVLGNLS 364
Query: 904 ASNKSRPEPLLQNEPHEDQKSGKLNIGHSKLEGTQSELSKWPSQSPMDTAS-----RSEA 1068
A + + E H+D K+ N SK+E + + S +T S
Sbjct: 365 AEARFK-------ESHDDDKN---NAVESKVENVRLAENPSGQSSHRNTDSGYSQVDFRV 414
Query: 1069 TSPGRTEIFLGSSGGFDSSRSKLPQHPSGPSSLGVAKYCSQSSNAA-PVRIRTVGPVSSV 1245
SPG + +S F +S P P ++ + + AA PVRIRT+GPVSSV
Sbjct: 415 QSPG-VFVSCHASSQFSPRQSSTSCRP--PPTVMIRNVGPRPLPAAPPVRIRTMGPVSSV 471
Query: 1246 SPRPESLNPWVPASATFRTAAPACSARPRLMKIGATPSH-HFMAPAVQIRSVVPVCSAPP 1422
PRP L +P RT AP+ SARP+ ++ H FMAPAV+IRSVVPVCSAPP
Sbjct: 472 -PRPHDLAAQIPGPPRMRTGAPSYSARPQPQRMDFVGVHPRFMAPAVRIRSVVPVCSAPP 530
Query: 1423 --AKLPESSQK-VLHSIAERTKEPKDVATANSELSNLRI 1530
K+P + Q+ L + + P+D++T SE S LRI
Sbjct: 531 PARKMPTAGQEGALLNKQKNGSVPEDIST-TSEFSKLRI 568