BLASTX nr result

ID: Coptis24_contig00001969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001969
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06446.1| 40S ribosomal protein S19 [Elaeis guineensis]          154   6e-36
ref|XP_002269657.1| PREDICTED: 40S ribosomal protein S19-1 [Viti...   153   2e-35
gb|ABK21356.1| unknown [Picea sitchensis] gi|116780144|gb|ABK215...   150   1e-34
ref|NP_001237514.1| uncharacterized protein LOC100305587 [Glycin...   148   4e-34
gb|AFW88130.1| hypothetical protein ZEAMMB73_643384 [Zea mays]        148   5e-34

>gb|ACF06446.1| 40S ribosomal protein S19 [Elaeis guineensis]
          Length = 143

 Score =  154 bits (390), Expect = 6e-36
 Identities = 70/77 (90%), Positives = 74/77 (96%)
 Frame = +2

Query: 2   HEFVKAYSSHLKRSGKMELPQWTDIVKTATFKELAPYDPDWYYIRAASMARKVYLRHGIG 181
           HEFVKAY++HLKRSGKMELP WTDIVKT  FKELAPYDPDWYYIRAASMARK+YLRHGIG
Sbjct: 13  HEFVKAYAAHLKRSGKMELPHWTDIVKTGRFKELAPYDPDWYYIRAASMARKIYLRHGIG 72

Query: 182 VGGFRKIYGGRKRNGSR 232
           VGGF+KIYGGRKRNGSR
Sbjct: 73  VGGFQKIYGGRKRNGSR 89


>ref|XP_002269657.1| PREDICTED: 40S ribosomal protein S19-1 [Vitis vinifera]
           gi|147798403|emb|CAN70140.1| hypothetical protein
           VITISV_032083 [Vitis vinifera]
           gi|297738070|emb|CBI27271.3| unnamed protein product
           [Vitis vinifera]
          Length = 146

 Score =  153 bits (386), Expect = 2e-35
 Identities = 69/77 (89%), Positives = 74/77 (96%)
 Frame = +2

Query: 2   HEFVKAYSSHLKRSGKMELPQWTDIVKTATFKELAPYDPDWYYIRAASMARKVYLRHGIG 181
           HEFVKAYSSHLKRSGK+ELP WTDIVKTATFKELAPYDPDWYY+RAASMARK+YLR G+G
Sbjct: 16  HEFVKAYSSHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYVRAASMARKIYLRQGLG 75

Query: 182 VGGFRKIYGGRKRNGSR 232
           VGGFR+IYGG KRNGSR
Sbjct: 76  VGGFRRIYGGSKRNGSR 92


>gb|ABK21356.1| unknown [Picea sitchensis] gi|116780144|gb|ABK21566.1| unknown
           [Picea sitchensis] gi|116781508|gb|ABK22129.1| unknown
           [Picea sitchensis] gi|116785123|gb|ABK23603.1| unknown
           [Picea sitchensis]
          Length = 144

 Score =  150 bits (378), Expect = 1e-34
 Identities = 66/77 (85%), Positives = 74/77 (96%)
 Frame = +2

Query: 2   HEFVKAYSSHLKRSGKMELPQWTDIVKTATFKELAPYDPDWYYIRAASMARKVYLRHGIG 181
           HEFV+AYS+HLKRSGK+ELP WTD+VKTATFKELAPYDPDWYY+RAASMARK+YLRHGIG
Sbjct: 13  HEFVRAYSAHLKRSGKIELPHWTDLVKTATFKELAPYDPDWYYVRAASMARKIYLRHGIG 72

Query: 182 VGGFRKIYGGRKRNGSR 232
           VG FRKIYGG +RNG+R
Sbjct: 73  VGAFRKIYGGSQRNGAR 89


>ref|NP_001237514.1| uncharacterized protein LOC100305587 [Glycine max]
           gi|255625993|gb|ACU13341.1| unknown [Glycine max]
          Length = 143

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/77 (87%), Positives = 73/77 (94%)
 Frame = +2

Query: 2   HEFVKAYSSHLKRSGKMELPQWTDIVKTATFKELAPYDPDWYYIRAASMARKVYLRHGIG 181
           HEFVKAYSSHLKRSGKMELP+WTDIVKTA FKELAPYDPDWYY+RAASMARK+YLR G+G
Sbjct: 13  HEFVKAYSSHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLG 72

Query: 182 VGGFRKIYGGRKRNGSR 232
           VG F++IYGG KRNGSR
Sbjct: 73  VGAFQRIYGGSKRNGSR 89


>gb|AFW88130.1| hypothetical protein ZEAMMB73_643384 [Zea mays]
          Length = 122

 Score =  148 bits (373), Expect = 5e-34
 Identities = 67/77 (87%), Positives = 73/77 (94%)
 Frame = +2

Query: 2   HEFVKAYSSHLKRSGKMELPQWTDIVKTATFKELAPYDPDWYYIRAASMARKVYLRHGIG 181
           HEFVKAYS+HLKRSGKMELP+W DIVKTA FKEL PYDPDWYYIRAAS+ARK+YLR GIG
Sbjct: 15  HEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYIRAASVARKIYLRQGIG 74

Query: 182 VGGFRKIYGGRKRNGSR 232
           VGGF+KIYGGR+RNGSR
Sbjct: 75  VGGFQKIYGGRQRNGSR 91


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