BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001964
         (1244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276047.1| PREDICTED: EIN3-binding F-box protein 1 [Vit...   375   e-101
ref|XP_002513122.1| glucose regulated repressor protein, putativ...   365   1e-98
ref|XP_002307150.1| predicted protein [Populus trichocarpa] gi|2...   364   3e-98
gb|ABI64127.1| putative F-box and leucine-rich repeat protein [J...   363   6e-98
ref|XP_002872053.1| protein binding protein [Arabidopsis lyrata ...   361   2e-97

>ref|XP_002276047.1| PREDICTED: EIN3-binding F-box protein 1 [Vitis vinifera]
          Length = 413

 Score =  375 bits (964), Expect = e-101
 Identities = 185/298 (62%), Positives = 223/298 (74%), Gaps = 2/298 (0%)
 Frame = +2

Query: 2    GVTDVGMVALANGLPHLQSLDVSYCRKITDRGLEAIAKGC-NLRSLHLEGCKFVTDKXXX 178
            G+TDVG++A+   L HLQSLDVSYCRK+TD+GL AIA+ C +LRSLHL GC+ V DK   
Sbjct: 116  GITDVGLMAIGRNLSHLQSLDVSYCRKLTDKGLSAIAESCCDLRSLHLAGCRSVNDKVLE 175

Query: 179  XXXXXXXXXXXXXXXXXIKITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSCVSKACSS 358
                               ITD GL  LV GC+++K LD++KCSN+ D GV  VS +CS 
Sbjct: 176  ALSKNCHNLEELGLQGCTYITDSGLTFLVKGCQRMKFLDINKCSNISDIGVCSVSISCSC 235

Query: 359  YLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLA-CNHSLKFLR 535
             L T KLLDC+K+GD S+ SLAQ CKNLE L+IGGCR+ISDES+KSL +A C+HSLK LR
Sbjct: 236  SLKTLKLLDCYKVGDESVLSLAQFCKNLETLIIGGCRDISDESVKSLAIAACSHSLKNLR 295

Query: 536  MDWCLNVSDTTLGCVLSQCGSLEALDIGCCEEVTDGAFRKIGSAGFESRLKFLRVSNCPK 715
            MDWCLN+SD +L C+   C +LEALDIGCCEEVTD AF+ +   G +  LK L+VSNCPK
Sbjct: 296  MDWCLNISDLSLNCIFCNCRNLEALDIGCCEEVTDAAFQGLNKGGSKLGLKVLKVSNCPK 355

Query: 716  ITVSGIEMLLDSCKSLEYLDVRSCPNVTEASCYQAGLRFPDCCKVNFTGSLSQLDALV 889
            ITV+GI +LLDSC SLEYLDVRSCP+VTEA C QAGL+FP+CCKVNF GSLS+ D LV
Sbjct: 356  ITVAGIGLLLDSCNSLEYLDVRSCPHVTEAGCDQAGLQFPECCKVNFLGSLSEPDVLV 413



 Score = 97.4 bits (241), Expect = 7e-18
 Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 53/244 (21%)
 Frame = +2

Query: 236 ITDMGLAVLVDG-----------CR---------------QIKSLDVSKCSNVGDAGVSC 337
           +TD  L V+ DG           CR                ++SLDVS C  + D G+S 
Sbjct: 91  VTDSDLKVIADGFGCLRVLGLQHCRGITDVGLMAIGRNLSHLQSLDVSYCRKLTDKGLSA 150

Query: 338 VSKACSSYLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNH 517
           ++++C   L +  L  C  + D  + +L+++C NLE L + GC  I+D  L  LV  C  
Sbjct: 151 IAESCCD-LRSLHLAGCRSVNDKVLEALSKNCHNLEELGLQGCTYITDSGLTFLVKGCQR 209

Query: 518 SLKFLRMDWCLNVSD-----TTLGCVLSQ----------------------CGSLEALDI 616
            +KFL ++ C N+SD      ++ C  S                       C +LE L I
Sbjct: 210 -MKFLDINKCSNISDIGVCSVSISCSCSLKTLKLLDCYKVGDESVLSLAQFCKNLETLII 268

Query: 617 GCCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKITVSGIEMLLDSCKSLEYLDVRSCPNV 796
           G C +++D + + +  A     LK LR+  C  I+   +  +  +C++LE LD+  C  V
Sbjct: 269 GGCRDISDESVKSLAIAACSHSLKNLRMDWCLNISDLSLNCIFCNCRNLEALDIGCCEEV 328

Query: 797 TEAS 808
           T+A+
Sbjct: 329 TDAA 332


>ref|XP_002513122.1| glucose regulated repressor protein, putative [Ricinus communis]
            gi|223548133|gb|EEF49625.1| glucose regulated repressor
            protein, putative [Ricinus communis]
          Length = 407

 Score =  365 bits (937), Expect = 1e-98
 Identities = 173/297 (58%), Positives = 226/297 (76%), Gaps = 1/297 (0%)
 Frame = +2

Query: 2    GVTDVGMVALANGLPHLQSLDVSYCRKITDRGLEAIAKGC-NLRSLHLEGCKFVTDKXXX 178
            G+TD GM ++  GL  LQSLDVSYCRK+TD+GL A+A GC +LR LHL GC+F+TD+   
Sbjct: 111  GITDNGMRSIGCGLSSLQSLDVSYCRKLTDKGLSAVAGGCRDLRILHLAGCRFITDEVLK 170

Query: 179  XXXXXXXXXXXXXXXXXIKITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSCVSKACSS 358
                               ITD G+  LV GC+QI+ LD++KCSN+GD G+S +SKACSS
Sbjct: 171  ALSTSCSNLQELGLQGCTNITDSGVKDLVSGCKQIQFLDINKCSNIGDVGISNLSKACSS 230

Query: 359  YLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNHSLKFLRM 538
             L T KLLDC+K+GD S+ SLA+ C NLE L+IGGCR+ISD+S+K L  AC +SLK LRM
Sbjct: 231  CLKTLKLLDCYKVGDESLSSLAKFCNNLETLIIGGCRDISDQSVKLLASACTNSLKNLRM 290

Query: 539  DWCLNVSDTTLGCVLSQCGSLEALDIGCCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKI 718
            DWCLN+SD++L C+L++C +LEALDIGCCEEVTD AF+ +G+   + +LK L++SNCPKI
Sbjct: 291  DWCLNISDSSLSCILTECRNLEALDIGCCEEVTDAAFQVLGTVENKLKLKVLKISNCPKI 350

Query: 719  TVSGIEMLLDSCKSLEYLDVRSCPNVTEASCYQAGLRFPDCCKVNFTGSLSQLDALV 889
            TV+GI  LL+ C  LEYLDVRSCP+VT++ C +AGL+FP+CCKVN+TGSL++ D L+
Sbjct: 351  TVTGIGRLLEKCNVLEYLDVRSCPHVTKSGCEEAGLQFPECCKVNYTGSLNEPDVLI 407


>ref|XP_002307150.1| predicted protein [Populus trichocarpa] gi|222856599|gb|EEE94146.1|
           predicted protein [Populus trichocarpa]
          Length = 406

 Score =  364 bits (934), Expect = 3e-98
 Identities = 175/296 (59%), Positives = 223/296 (75%), Gaps = 1/296 (0%)
 Frame = +2

Query: 2   GVTDVGMVALANGLPHLQSLDVSYCRKITDRGLEAIAKGCN-LRSLHLEGCKFVTDKXXX 178
           G++D GM ++  GL  LQSL+VSYCRK+TD+GL A+A+G   LRSLHL+GCKFVTD    
Sbjct: 110 GISDKGMSSIGGGLSSLQSLNVSYCRKLTDKGLSAVAEGSQGLRSLHLDGCKFVTDVVLK 169

Query: 179 XXXXXXXXXXXXXXXXXIKITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSCVSKACSS 358
                              ITD GLA LV GCRQI  LD++KCSNVGD+GVS VS+ACSS
Sbjct: 170 ALSKNCPNLEELGLQGCTSITDCGLADLVSGCRQIHFLDINKCSNVGDSGVSTVSEACSS 229

Query: 359 YLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNHSLKFLRM 538
           ++ T KL+DC ++G+ SI SLA+ CKNLE L+IGGCR+ISDES+KSL  +C  SLK LRM
Sbjct: 230 FMKTLKLMDCFRVGNKSILSLAKFCKNLETLIIGGCRDISDESIKSLATSCQSSLKNLRM 289

Query: 539 DWCLNVSDTTLGCVLSQCGSLEALDIGCCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKI 718
           DWCLN+S++++  +L++C +LEALDIGCC EVTD  F  +G+   E RLK L++S+CPKI
Sbjct: 290 DWCLNISNSSISFILTKCRNLEALDIGCCGEVTDAVFHGLGAMETEMRLKVLKISSCPKI 349

Query: 719 TVSGIEMLLDSCKSLEYLDVRSCPNVTEASCYQAGLRFPDCCKVNFTGSLSQLDAL 886
           TV+GI MLLD C SLEYLDVRSCP++T++ C + GL+FPDCCKVNF GSL++ D L
Sbjct: 350 TVTGIGMLLDKCNSLEYLDVRSCPHITKSGCDEVGLQFPDCCKVNFNGSLNEPDVL 405



 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 77/277 (27%), Positives = 119/277 (42%), Gaps = 62/277 (22%)
 Frame = +2

Query: 236 ITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSCVSKACSSY------------------ 361
           +TD  LAV+ DG R +K L++  C  + D G+S +    SS                   
Sbjct: 85  VTDSDLAVIADGFRCLKVLNLQNCKGISDKGMSSIGGGLSSLQSLNVSYCRKLTDKGLSA 144

Query: 362 -------LMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNHS 520
                  L +  L  C  + D  + +L+++C NLE L + GC +I+D  L  LV  C   
Sbjct: 145 VAEGSQGLRSLHLDGCKFVTDVVLKALSKNCPNLEELGLQGCTSITDCGLADLVSGC-RQ 203

Query: 521 LKFLRMDWCLNVSDTTLGCVLSQCGS---------------------------LEALDIG 619
           + FL ++ C NV D+ +  V   C S                           LE L IG
Sbjct: 204 IHFLDINKCSNVGDSGVSTVSEACSSFMKTLKLMDCFRVGNKSILSLAKFCKNLETLIIG 263

Query: 620 CCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKITVSGIEMLLDSCKSLEYLDVRSCPNVT 799
            C +++D + + + ++  +S LK LR+  C  I+ S I  +L  C++LE LD+  C  VT
Sbjct: 264 GCRDISDESIKSLATS-CQSSLKNLRMDWCLNISNSSISFILTKCRNLEALDIGCCGEVT 322

Query: 800 EASCYQAG----------LRFPDCCKVNFTGSLSQLD 880
           +A  +  G          L+   C K+  TG    LD
Sbjct: 323 DAVFHGLGAMETEMRLKVLKISSCPKITVTGIGMLLD 359


>gb|ABI64127.1| putative F-box and leucine-rich repeat protein [Jatropha curcas]
          Length = 407

 Score =  363 bits (931), Expect = 6e-98
 Identities = 175/297 (58%), Positives = 223/297 (75%), Gaps = 1/297 (0%)
 Frame = +2

Query: 2    GVTDVGMVALANGLPHLQSLDVSYCRKITDRGLEAIAKGC-NLRSLHLEGCKFVTDKXXX 178
            G+TD GM ++  GL  LQSLDVS+CRK+TD+GL A+A+GC +L+SLHL GC+ +TD    
Sbjct: 111  GITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLR 170

Query: 179  XXXXXXXXXXXXXXXXXIKITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSCVSKACSS 358
                               ITD GL  LV GC+QI+ LD++KCSN+GD G+S +SKACSS
Sbjct: 171  ALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSS 230

Query: 359  YLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNHSLKFLRM 538
             L T K+LDC+K+GD SI SLA+ C NLE L+IGGCR+ISD S+K L  AC +SLK LRM
Sbjct: 231  CLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSIKLLASACKNSLKTLRM 290

Query: 539  DWCLNVSDTTLGCVLSQCGSLEALDIGCCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKI 718
            DWCLNVSD++L C+L++C +LEALDIGCCEE+TD AF+ + +   E  LK L+VSNCPKI
Sbjct: 291  DWCLNVSDSSLSCILTECRNLEALDIGCCEEITDAAFQGLATIKTELGLKILKVSNCPKI 350

Query: 719  TVSGIEMLLDSCKSLEYLDVRSCPNVTEASCYQAGLRFPDCCKVNFTGSLSQLDALV 889
            TV+GI MLL+ C  LEYLDVRSCP+VT++ C +AGL+FP CCKVN+TGSL++ D LV
Sbjct: 351  TVTGIGMLLEKCNGLEYLDVRSCPHVTKSGCDEAGLQFPKCCKVNYTGSLNEPDVLV 407



 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 72/271 (26%), Positives = 119/271 (43%), Gaps = 62/271 (22%)
 Frame = +2

Query: 236 ITDMGLAVLVDGCR--------------------------QIKSLDVSKCSNVGDAGVSC 337
           +TD  LAV+  G +                           ++SLDVS C  + D G+  
Sbjct: 86  VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLA 145

Query: 338 VSKACSSYLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLV----- 502
           V++ C   L +  L  C  I DG + +L+ +C  L+ L + GC +I+D+ L  LV     
Sbjct: 146 VAEGCKD-LQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQ 204

Query: 503 ---------------------LACNHSLKFLRMDWCLNVSDTTLGCVLSQCGSLEALDIG 619
                                 AC+  LK L+M  C  V D ++  +   C +LE L IG
Sbjct: 205 IQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIG 264

Query: 620 CCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKITVSGIEMLLDSCKSLEYLDVRSCPNVT 799
            C +++D + + + SA  ++ LK LR+  C  ++ S +  +L  C++LE LD+  C  +T
Sbjct: 265 GCRDISDNSIKLLASA-CKNSLKTLRMDWCLNVSDSSLSCILTECRNLEALDIGCCEEIT 323

Query: 800 EASCYQAG----------LRFPDCCKVNFTG 862
           +A+               L+  +C K+  TG
Sbjct: 324 DAAFQGLATIKTELGLKILKVSNCPKITVTG 354


>ref|XP_002872053.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317890|gb|EFH48312.1| protein binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score =  361 bits (926), Expect = 2e-97
 Identities = 179/297 (60%), Positives = 222/297 (74%), Gaps = 1/297 (0%)
 Frame = +2

Query: 2   GVTDVGMVALANGLPHLQSLDVSYCRKITDRGLEAIAKGCN-LRSLHLEGCKFVTDKXXX 178
           G+TD G+ ++   L  LQ LDVSYCRK++D+GL A+A+GC+ LR+LHL GC+F+TD+   
Sbjct: 110 GITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLK 169

Query: 179 XXXXXXXXXXXXXXXXXIKITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSCVSKACSS 358
                              ITD GLA LV GCR+IKSLD++KCSNVGDAGVS ++KAC+S
Sbjct: 170 SLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSLAKACAS 229

Query: 359 YLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNHSLKFLRM 538
            L T KLLDC+K+G+ SI SLAQ CKNLE L+IGGCR+ISDES+  L  +C  SLK LRM
Sbjct: 230 SLKTLKLLDCYKVGNESILSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRM 289

Query: 539 DWCLNVSDTTLGCVLSQCGSLEALDIGCCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKI 718
           DWCLN+SD++L C+L QC +LEALDIGCCEEVTD AFR++GS      LK L+VSNC KI
Sbjct: 290 DWCLNISDSSLSCILKQCRNLEALDIGCCEEVTDTAFRELGSDDVLG-LKVLKVSNCTKI 348

Query: 719 TVSGIEMLLDSCKSLEYLDVRSCPNVTEASCYQAGLRFPDCCKVNFTGSLSQLDALV 889
           TV+GI  +LD C SLEYLDVRS P+VTE  C +AGL FP CCKVNF+GSL++ D L+
Sbjct: 349 TVTGIGKILDKCSSLEYLDVRSLPHVTEVRCSEAGLEFPTCCKVNFSGSLTEPDVLL 405



 Score =  109 bits (273), Expect = 1e-21
 Identities = 64/204 (31%), Positives = 108/204 (52%)
 Frame = +2

Query: 236 ITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSCVSKACSSYLMTFKLLDCHKIGDGSIF 415
           +TD  LAV+ +G + ++ L++  C  + D G++ + + C S L    +  C K+ D  + 
Sbjct: 85  VTDSDLAVISEGFKCLRVLNLHNCKGITDTGLASIGR-CLSLLQFLDVSYCRKLSDKGLS 143

Query: 416 SLAQSCKNLEILVIGGCRNISDESLKSLVLACNHSLKFLRMDWCLNVSDTTLGCVLSQCG 595
           ++A+ C +L  L + GCR I+DESLKSL   C   L+ L +  C N++D+ L  ++  C 
Sbjct: 144 AVAEGCHDLRALHLAGCRFITDESLKSLSERC-RDLEALGLQGCTNITDSGLADLVKGCR 202

Query: 596 SLEALDIGCCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKITVSGIEMLLDSCKSLEYLD 775
            +++LDI  C  V D     +  A   S LK L++ +C K+    I  L   CK+LE L 
Sbjct: 203 KIKSLDINKCSNVGDAGVSSLAKA-CASSLKTLKLLDCYKVGNESILSLAQFCKNLETLI 261

Query: 776 VRSCPNVTEASCYQAGLRFPDCCK 847
           +  C ++++ S     +   D CK
Sbjct: 262 IGGCRDISDESI----MLLADSCK 281