BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001946
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT08727.1| 60S ribosomal protein L11 [Hyacinthus orientalis]      305   7e-81
ref|NP_191429.1| 60S ribosomal protein L11-2 [Arabidopsis thalia...   303   3e-80
pir||T04865 ribosomal protein L11, cytosolic - Arabidopsis thali...   303   3e-80
ref|NP_850376.2| 60S ribosomal protein L11-1 [Arabidopsis thalia...   303   3e-80
emb|CAA57395.1| ribosomal protein L16 [Arabidopsis thaliana]          302   6e-80

>gb|AAT08727.1| 60S ribosomal protein L11 [Hyacinthus orientalis]
          Length = 189

 Score =  305 bits (782), Expect = 7e-81
 Identities = 155/176 (88%), Positives = 158/176 (89%)
 Frame = +1

Query: 85  LANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEK 264
           LANPMREIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEK
Sbjct: 14  LANPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEK 73

Query: 265 IACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYG 444
           IACYVTVRGDKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPSTGIYG
Sbjct: 74  IACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYG 133

Query: 445 MDFYVVLEXXXXXXXXXXXXXXXXXIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 612
           MDFYVVLE                 IQHRVTKDDAM WFQVKYEGVILNKSQNITG
Sbjct: 134 MDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKDDAMNWFQVKYEGVILNKSQNITG 189


>ref|NP_191429.1| 60S ribosomal protein L11-2 [Arabidopsis thaliana]
           gi|18415161|ref|NP_567563.1| 60S ribosomal protein L11-2
           [Arabidopsis thaliana] gi|30694822|ref|NP_568649.2| 60S
           ribosomal protein L11-2 [Arabidopsis thaliana]
           gi|27735235|sp|P42794.2|RL112_ARATH RecName: Full=60S
           ribosomal protein L11-2; AltName: Full=L16
           gi|11908058|gb|AAG41458.1|AF326876_1 putative ribosomal
           protein L11 [Arabidopsis thaliana]
           gi|12642874|gb|AAK00379.1|AF339697_1 putative ribosomal
           protein L11 [Arabidopsis thaliana]
           gi|14326537|gb|AAK60313.1|AF385722_1
           AT4g18730/F28A21_140 [Arabidopsis thaliana]
           gi|7630065|emb|CAB88287.1| ribosomal protein L11-like
           [Arabidopsis thaliana] gi|9758681|dbj|BAB09220.1|
           ribosomal protein L11-like [Arabidopsis thaliana]
           gi|14517470|gb|AAK62625.1| AT4g18730/F28A21_140
           [Arabidopsis thaliana] gi|18700224|gb|AAL77722.1|
           AT4g18730/F28A21_140 [Arabidopsis thaliana]
           gi|21553372|gb|AAM62465.1| ribosomal protein L11,
           cytosolic [Arabidopsis thaliana]
           gi|21592421|gb|AAM64372.1| ribosomal protein L11,
           cytosolic [Arabidopsis thaliana]
           gi|22136574|gb|AAM91073.1| AT4g18730/F28A21_140
           [Arabidopsis thaliana] gi|332007914|gb|AED95297.1| 60S
           ribosomal protein L11-2 [Arabidopsis thaliana]
           gi|332646298|gb|AEE79819.1| 60S ribosomal protein L11-2
           [Arabidopsis thaliana] gi|332658682|gb|AEE84082.1| 60S
           ribosomal protein L11-2 [Arabidopsis thaliana]
          Length = 182

 Score =  303 bits (777), Expect = 3e-80
 Identities = 153/176 (86%), Positives = 159/176 (90%)
 Frame = +1

Query: 85  LANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEK 264
           L+NPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEK
Sbjct: 7   LSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEK 66

Query: 265 IACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYG 444
           IACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPSTGIYG
Sbjct: 67  IACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYG 126

Query: 445 MDFYVVLEXXXXXXXXXXXXXXXXXIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 612
           MDFYVVLE                 IQHRVTKDDAMKWFQVKYEGVILNKSQNITG
Sbjct: 127 MDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 182


>pir||T04865 ribosomal protein L11, cytosolic - Arabidopsis thaliana
           gi|550547|emb|CAA57396.1| ribosomal protein L16
           [Arabidopsis thaliana] gi|4539392|emb|CAB37458.1|
           ribosomal protein L11, cytosolic [Arabidopsis thaliana]
           gi|7268667|emb|CAB78875.1| ribosomal protein L11,
           cytosolic [Arabidopsis thaliana]
          Length = 184

 Score =  303 bits (777), Expect = 3e-80
 Identities = 153/176 (86%), Positives = 159/176 (90%)
 Frame = +1

Query: 85  LANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEK 264
           L+NPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEK
Sbjct: 9   LSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEK 68

Query: 265 IACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYG 444
           IACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPSTGIYG
Sbjct: 69  IACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYG 128

Query: 445 MDFYVVLEXXXXXXXXXXXXXXXXXIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 612
           MDFYVVLE                 IQHRVTKDDAMKWFQVKYEGVILNKSQNITG
Sbjct: 129 MDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 184


>ref|NP_850376.2| 60S ribosomal protein L11-1 [Arabidopsis thaliana]
           gi|297791141|ref|XP_002863455.1| 60S ribosomal protein
           L11 [Arabidopsis lyrata subsp. lyrata]
           gi|297804282|ref|XP_002870025.1| 60S ribosomal protein
           L11 [Arabidopsis lyrata subsp. lyrata]
           gi|21542441|sp|P42795.2|RL111_ARATH RecName: Full=60S
           ribosomal protein L11-1; AltName: Full=L16A
           gi|110737006|dbj|BAF00458.1| 60S ribosomal protein L11B
           [Arabidopsis thaliana] gi|297309290|gb|EFH39714.1| 60S
           ribosomal protein L11 [Arabidopsis lyrata subsp. lyrata]
           gi|297315861|gb|EFH46284.1| 60S ribosomal protein L11
           [Arabidopsis lyrata subsp. lyrata]
           gi|330255069|gb|AEC10163.1| 60S ribosomal protein L11-1
           [Arabidopsis thaliana]
          Length = 182

 Score =  303 bits (777), Expect = 3e-80
 Identities = 153/176 (86%), Positives = 159/176 (90%)
 Frame = +1

Query: 85  LANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEK 264
           L+NPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEK
Sbjct: 7   LSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEK 66

Query: 265 IACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYG 444
           IACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPSTGIYG
Sbjct: 67  IACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYG 126

Query: 445 MDFYVVLEXXXXXXXXXXXXXXXXXIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 612
           MDFYVVLE                 IQHRVTKDDAMKWFQVKYEGVILNKSQNITG
Sbjct: 127 MDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 182


>emb|CAA57395.1| ribosomal protein L16 [Arabidopsis thaliana]
          Length = 182

 Score =  302 bits (774), Expect = 6e-80
 Identities = 152/176 (86%), Positives = 159/176 (90%)
 Frame = +1

Query: 85  LANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEK 264
           L+NPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEK
Sbjct: 7   LSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEK 66

Query: 265 IACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYG 444
           IACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGI+YDPSTGIYG
Sbjct: 67  IACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIRYDPSTGIYG 126

Query: 445 MDFYVVLEXXXXXXXXXXXXXXXXXIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 612
           MDFYVVLE                 IQHRVTKDDAMKWFQVKYEGVILNKSQNITG
Sbjct: 127 MDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 182