BLASTX nr result

ID: Coptis24_contig00001939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001939
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71837.1| hypothetical protein VITISV_034030 [Vitis vinifera]   654   0.0  
ref|XP_002284333.1| PREDICTED: casein kinase II subunit alpha is...   653   0.0  
ref|XP_002525258.1| casein kinase II, alpha chain, putative [Ric...   647   0.0  
ref|XP_002303393.1| predicted protein [Populus trichocarpa] gi|2...   646   0.0  
ref|XP_004166575.1| PREDICTED: casein kinase II subunit alpha, c...   642   0.0  

>emb|CAN71837.1| hypothetical protein VITISV_034030 [Vitis vinifera]
          Length = 392

 Score =  654 bits (1687), Expect = 0.0
 Identities = 314/375 (83%), Positives = 332/375 (88%), Gaps = 10/375 (2%)
 Frame = +1

Query: 40   GSPLAAAQRKQNERRPFPL----------ENLAQRIGKSIRRPGATSKARVHADINVVRP 189
            G+PL+  Q+      P P           E LAQRIGKS+RRPGA SKARV+ADINV+RP
Sbjct: 15   GTPLSHPQKSPPPPPPPPSHHRFALSSLPETLAQRIGKSVRRPGAPSKARVYADINVIRP 74

Query: 190  KDYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTNNERCVXXXXXXXXXXXXXX 369
            K+YWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCT+NE+C+              
Sbjct: 75   KEYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCIIKILKPVKKKKIKR 134

Query: 370  XXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLTDYDTRYYIYEL 549
                LQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTL+DYD RYYIYEL
Sbjct: 135  EIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYEL 194

Query: 550  LKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 729
            LKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP
Sbjct: 195  LKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 254

Query: 730  ELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLTK 909
            ELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYL K
Sbjct: 255  ELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNK 314

Query: 910  YRLELDPHLEALVGRHSRKPWTKFINADNQHLAIPEAVDFLDKLLRYDHQERPTAKEAMA 1089
            YRLELDPHL ALVGRHSRKPWTKF+NADNQHLA+PE++DFLDKLLRYDHQERPTAKEAMA
Sbjct: 315  YRLELDPHLAALVGRHSRKPWTKFVNADNQHLAVPESIDFLDKLLRYDHQERPTAKEAMA 374

Query: 1090 HPYFYPVRSAESSRT 1134
            HPYFYP+R+AESSR+
Sbjct: 375  HPYFYPIRNAESSRS 389


>ref|XP_002284333.1| PREDICTED: casein kinase II subunit alpha isoform 1 [Vitis vinifera]
            gi|296087330|emb|CBI33704.3| unnamed protein product
            [Vitis vinifera]
          Length = 424

 Score =  653 bits (1685), Expect = 0.0
 Identities = 308/346 (89%), Positives = 323/346 (93%)
 Frame = +1

Query: 97   ENLAQRIGKSIRRPGATSKARVHADINVVRPKDYWDYESLTVQWGEQDDYEVVRKVGRGK 276
            E LAQRIGKS+RRPGA SKARV+ADINV+RPK+YWDYESLTVQWGEQDDYEVVRKVGRGK
Sbjct: 76   ETLAQRIGKSVRRPGAPSKARVYADINVIRPKEYWDYESLTVQWGEQDDYEVVRKVGRGK 135

Query: 277  YSEVFEGVHCTNNERCVXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTP 456
            YSEVFEGVHCT+NE+C+                  LQNLCGGPNIVKLLDIVRDQQSKTP
Sbjct: 136  YSEVFEGVHCTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTP 195

Query: 457  SLIFEYVNNTDFKVLYPTLTDYDTRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR 636
            SLIFEYVNNTDFKVLYPTL+DYD RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR
Sbjct: 196  SLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR 255

Query: 637  KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRK 816
            KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRK
Sbjct: 256  KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRK 315

Query: 817  EPFFYGHDNYDQLVKIAKVLGTDELNAYLTKYRLELDPHLEALVGRHSRKPWTKFINADN 996
            EPFFYGHDNYDQLVKIAKVLGTDELNAYL KYRLELDPHL ALVGRHSRKPWTKF+NADN
Sbjct: 316  EPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYRLELDPHLAALVGRHSRKPWTKFVNADN 375

Query: 997  QHLAIPEAVDFLDKLLRYDHQERPTAKEAMAHPYFYPVRSAESSRT 1134
            QHLA+PE++DFLDKLLRYDHQERPTAKEAMAHPYFYP+R+AESSR+
Sbjct: 376  QHLAVPESIDFLDKLLRYDHQERPTAKEAMAHPYFYPIRNAESSRS 421


>ref|XP_002525258.1| casein kinase II, alpha chain, putative [Ricinus communis]
            gi|223535416|gb|EEF37086.1| casein kinase II, alpha
            chain, putative [Ricinus communis]
          Length = 489

 Score =  647 bits (1669), Expect = 0.0
 Identities = 311/364 (85%), Positives = 326/364 (89%), Gaps = 2/364 (0%)
 Frame = +1

Query: 46   PLAAAQRKQNERRPFPL--ENLAQRIGKSIRRPGATSKARVHADINVVRPKDYWDYESLT 219
            P+A A R    +    L  E LAQ+IGKSIRRPGA SKARV+AD+NV+RPKDYWDYESLT
Sbjct: 123  PIAEAIRLHRLKNSVALSSETLAQKIGKSIRRPGAPSKARVYADVNVIRPKDYWDYESLT 182

Query: 220  VQWGEQDDYEVVRKVGRGKYSEVFEGVHCTNNERCVXXXXXXXXXXXXXXXXXXLQNLCG 399
            VQWGEQDDYEVVRKVGRGKYSEVFEGVHC +NE+CV                  LQNLCG
Sbjct: 183  VQWGEQDDYEVVRKVGRGKYSEVFEGVHCADNEKCVIKILKPVKKKKIKREIKILQNLCG 242

Query: 400  GPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLTDYDTRYYIYELLKALDYCHSQ 579
            GPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTL+DYD RYYIYELLKALDYCHSQ
Sbjct: 243  GPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQ 302

Query: 580  GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 759
            GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD
Sbjct: 303  GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 362

Query: 760  YSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLTKYRLELDPHLE 939
            YSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYL KYR+ELDPHL 
Sbjct: 363  YSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYRIELDPHLA 422

Query: 940  ALVGRHSRKPWTKFINADNQHLAIPEAVDFLDKLLRYDHQERPTAKEAMAHPYFYPVRSA 1119
            ALVGRH+RKPW KFIN DNQHLA+PEAV+FLDKLLRYDHQERPTAKEAMAHPYFYP+R+A
Sbjct: 423  ALVGRHNRKPWAKFINMDNQHLAVPEAVNFLDKLLRYDHQERPTAKEAMAHPYFYPIRNA 482

Query: 1120 ESSR 1131
            ESSR
Sbjct: 483  ESSR 486


>ref|XP_002303393.1| predicted protein [Populus trichocarpa] gi|222840825|gb|EEE78372.1|
            predicted protein [Populus trichocarpa]
          Length = 448

 Score =  646 bits (1667), Expect = 0.0
 Identities = 306/348 (87%), Positives = 322/348 (92%)
 Frame = +1

Query: 91   PLENLAQRIGKSIRRPGATSKARVHADINVVRPKDYWDYESLTVQWGEQDDYEVVRKVGR 270
            P + LAQ+IGKSIRRPGA SKARV+ADINV+RPKDYWDYESLTVQWGEQDDYEVV+KVGR
Sbjct: 99   PPDTLAQKIGKSIRRPGAPSKARVYADINVIRPKDYWDYESLTVQWGEQDDYEVVKKVGR 158

Query: 271  GKYSEVFEGVHCTNNERCVXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSK 450
            GKYSEVFEGVHCT+NE+C+                  LQNLCGGPNIVKLLDIVRDQQSK
Sbjct: 159  GKYSEVFEGVHCTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSK 218

Query: 451  TPSLIFEYVNNTDFKVLYPTLTDYDTRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 630
            TPSLIFEYVNNTDFKVLYPTL+D+D RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE
Sbjct: 219  TPSLIFEYVNNTDFKVLYPTLSDFDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 278

Query: 631  QRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIF 810
            QRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIF
Sbjct: 279  QRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIF 338

Query: 811  RKEPFFYGHDNYDQLVKIAKVLGTDELNAYLTKYRLELDPHLEALVGRHSRKPWTKFINA 990
            RKEPFFYGHDNYDQLVKIAKVLGTDELNAYL +YR+ELD HL ALVGRHSRKPW+KFIN 
Sbjct: 339  RKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNRYRIELDLHLAALVGRHSRKPWSKFINV 398

Query: 991  DNQHLAIPEAVDFLDKLLRYDHQERPTAKEAMAHPYFYPVRSAESSRT 1134
            DNQHLA+PEAVDFLDKLLRYDHQERPTAKEAMAHPYFYP+R+AESSRT
Sbjct: 399  DNQHLAVPEAVDFLDKLLRYDHQERPTAKEAMAHPYFYPIRNAESSRT 446


>ref|XP_004166575.1| PREDICTED: casein kinase II subunit alpha, chloroplastic-like
            [Cucumis sativus]
          Length = 441

 Score =  642 bits (1656), Expect = 0.0
 Identities = 307/356 (86%), Positives = 325/356 (91%)
 Frame = +1

Query: 79   RRPFPLENLAQRIGKSIRRPGATSKARVHADINVVRPKDYWDYESLTVQWGEQDDYEVVR 258
            R P P E LAQ+IGKSIRRPGA SKARV+AD+NV+RPKDYWDYESLTVQWG+QD+YEVVR
Sbjct: 87   RSPSPQETLAQKIGKSIRRPGAPSKARVYADVNVIRPKDYWDYESLTVQWGDQDNYEVVR 146

Query: 259  KVGRGKYSEVFEGVHCTNNERCVXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRD 438
            KVGRGKYSEVFEGVHCT+NE+CV                  LQNLCGG NIVKLLDIVRD
Sbjct: 147  KVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGINIVKLLDIVRD 206

Query: 439  QQSKTPSLIFEYVNNTDFKVLYPTLTDYDTRYYIYELLKALDYCHSQGIMHRDVKPHNVM 618
            QQSKTPSLIFE+VNN DFKVLYPTL+D+D RYYIYELLKALDYCHSQGIMHRDVKPHNVM
Sbjct: 207  QQSKTPSLIFEHVNNIDFKVLYPTLSDFDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 266

Query: 619  IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 798
            IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA
Sbjct: 267  IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 326

Query: 799  GMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLTKYRLELDPHLEALVGRHSRKPWTK 978
            GMIFRKEPFFYGHDNYDQLVKIAKVLGTDELN YL+KYR+ELDPHL ALVGRHSRKPWTK
Sbjct: 327  GMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNTYLSKYRIELDPHLSALVGRHSRKPWTK 386

Query: 979  FINADNQHLAIPEAVDFLDKLLRYDHQERPTAKEAMAHPYFYPVRSAESSRTTRNQ 1146
            FIN DNQHLA+PEAVDF+DKLLRYDHQER TAKEAMAHPYF+P+R+AESSR TRNQ
Sbjct: 387  FINVDNQHLAVPEAVDFVDKLLRYDHQERLTAKEAMAHPYFFPIRNAESSR-TRNQ 441


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