BLASTX nr result

ID: Coptis24_contig00001935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001935
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichoca...    69   3e-10
ref|XP_002333828.1| BED finger-nbs resistance protein [Populus t...    69   3e-10
ref|XP_002530179.1| Disease resistance protein RPM1, putative [R...    69   4e-10
ref|XP_002325703.1| BED finger-nbs-lrr resistance protein [Popul...    67   2e-09
gb|ACN87495.1| NBS-containing resistance-like protein [Corylus a...    67   2e-09

>ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860585|gb|EEE98132.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 802

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/71 (47%), Positives = 44/71 (61%)
 Frame = +2

Query: 2   FENVLWVTVSRDVDAQKLQQQIAKVVDLDLSAKQDEXXXXXXXXXXXHRKGKFVLILDDI 181
           F+NV W+TV++D    KLQ  IAK VDLDLS ++DE             K KFVLILDD+
Sbjct: 85  FQNVFWITVTQDFSIYKLQNLIAKAVDLDLSNEEDEKKRAVKLSNGLIAKKKFVLILDDL 144

Query: 182 WKQFDLQELGV 214
           W  F  +++GV
Sbjct: 145 WNHFSPEKVGV 155


>ref|XP_002333828.1| BED finger-nbs resistance protein [Populus trichocarpa]
           gi|222838647|gb|EEE77012.1| BED finger-nbs resistance
           protein [Populus trichocarpa]
          Length = 1153

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/71 (47%), Positives = 44/71 (61%)
 Frame = +2

Query: 2   FENVLWVTVSRDVDAQKLQQQIAKVVDLDLSAKQDEXXXXXXXXXXXHRKGKFVLILDDI 181
           F+NV W+TV++D    KLQ  IAK VDLDLS ++DE             K KFVLILDD+
Sbjct: 205 FQNVFWITVTQDFSIYKLQNLIAKAVDLDLSNEEDEKKRAVNLSNGLIAKKKFVLILDDL 264

Query: 182 WKQFDLQELGV 214
           W  F  +++GV
Sbjct: 265 WNHFSPEKVGV 275


>ref|XP_002530179.1| Disease resistance protein RPM1, putative [Ricinus communis]
           gi|223530298|gb|EEF32193.1| Disease resistance protein
           RPM1, putative [Ricinus communis]
          Length = 969

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/70 (44%), Positives = 43/70 (61%)
 Frame = +2

Query: 5   ENVLWVTVSRDVDAQKLQQQIAKVVDLDLSAKQDEXXXXXXXXXXXHRKGKFVLILDDIW 184
           +NV W+TVS+D   +KLQ  IAK +D D+S + DE             K KFVLILDD+W
Sbjct: 186 KNVYWITVSQDFSVRKLQNHIAKAIDRDISIEDDEKKRAALLWNALSNKQKFVLILDDLW 245

Query: 185 KQFDLQELGV 214
           + F L+ +G+
Sbjct: 246 ENFSLENVGI 255


>ref|XP_002325703.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862578|gb|EEF00085.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 859

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/69 (46%), Positives = 45/69 (65%)
 Frame = +2

Query: 8   NVLWVTVSRDVDAQKLQQQIAKVVDLDLSAKQDEXXXXXXXXXXXHRKGKFVLILDDIWK 187
           +V WVTVS+D    +LQ  +A+ + LDLS++ +E            +K K+VLILDD+WK
Sbjct: 366 HVYWVTVSQDTSINRLQTSLARRIGLDLSSEDEELHRAAALKEELKKKQKWVLILDDLWK 425

Query: 188 QFDLQELGV 214
            FDLQ+LGV
Sbjct: 426 AFDLQKLGV 434


>gb|ACN87495.1| NBS-containing resistance-like protein [Corylus avellana]
          Length = 155

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   FENVLWVTVSRDVDAQKLQQQIAKVVDLDLSAKQDEXXXXXXXXXXXHRKGKFVLILDDI 181
           F++V W+TVS+D    KLQ  IAK+VDLDLS   DE            R+ + VLILDD+
Sbjct: 17  FDHVFWITVSQDFSIHKLQNDIAKMVDLDLSNVDDEKKRAAKLAQALLRRKQSVLILDDV 76

Query: 182 WKQFDLQELGV-LGV 223
           W  F L+++G+ LGV
Sbjct: 77  WNHFLLEKVGIPLGV 91