BLASTX nr result

ID: Coptis24_contig00001924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001924
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17877.3| unnamed protein product [Vitis vinifera]              295   7e-78
ref|XP_002266059.1| PREDICTED: auxin efflux carrier component 2 ...   295   7e-78
ref|XP_002324677.1| auxin efflux carrier component [Populus tric...   293   3e-77
ref|XP_003610026.1| Auxin efflux carrier component [Medicago tru...   289   5e-76
ref|XP_002527704.1| Auxin efflux carrier component, putative [Ri...   286   4e-75

>emb|CBI17877.3| unnamed protein product [Vitis vinifera]
          Length = 437

 Score =  295 bits (756), Expect = 7e-78
 Identities = 155/199 (77%), Positives = 172/199 (86%), Gaps = 1/199 (0%)
 Frame = +1

Query: 1   KVVDDGEVEIEDGS-KFSANGSPYLSQKKVDMEAVXXXXXXXXXXSQMPPASVMTRLILI 177
           +V  D E ++EDGS +  A G+PY  QKK DM+A            QMPP SVMTRLI+I
Sbjct: 232 RVNGDREADMEDGSIRTQAAGTPYSGQKKADMQA---------KKQQMPPTSVMTRLIMI 282

Query: 178 MVWRKLIRNPNTYSSIIGLIWALVTYRFNIKMPTIVSGSITILSNAGLGMAMFSLGLFMA 357
           MVWRKLIRNPNTY+S+IGLIW+LV++R+NIKMPTIVSGSI+ILS+AGLGMAMFSLGLFMA
Sbjct: 283 MVWRKLIRNPNTYASLIGLIWSLVSFRWNIKMPTIVSGSISILSDAGLGMAMFSLGLFMA 342

Query: 358 LQPKLIACGKRVATFSMAVRFLTGPAVIAATSIACGLRGVLLHVAIVQAALPQGIVPFVF 537
           LQPK+IACGK VATFSMAVRFLTGPAVIAATSIA G+RGVLLHVAIVQAALPQGIVPFVF
Sbjct: 343 LQPKMIACGKTVATFSMAVRFLTGPAVIAATSIAIGMRGVLLHVAIVQAALPQGIVPFVF 402

Query: 538 AKEYNVHADILSTGVIFGM 594
           AKEYNVHADILST VIFGM
Sbjct: 403 AKEYNVHADILSTAVIFGM 421


>ref|XP_002266059.1| PREDICTED: auxin efflux carrier component 2 isoform 1 [Vitis
           vinifera]
          Length = 630

 Score =  295 bits (756), Expect = 7e-78
 Identities = 155/199 (77%), Positives = 172/199 (86%), Gaps = 1/199 (0%)
 Frame = +1

Query: 1   KVVDDGEVEIEDGS-KFSANGSPYLSQKKVDMEAVXXXXXXXXXXSQMPPASVMTRLILI 177
           +V  D E ++EDGS +  A G+PY  QKK DM+A            QMPP SVMTRLI+I
Sbjct: 425 RVNGDREADMEDGSIRTQAAGTPYSGQKKADMQA---------KKQQMPPTSVMTRLIMI 475

Query: 178 MVWRKLIRNPNTYSSIIGLIWALVTYRFNIKMPTIVSGSITILSNAGLGMAMFSLGLFMA 357
           MVWRKLIRNPNTY+S+IGLIW+LV++R+NIKMPTIVSGSI+ILS+AGLGMAMFSLGLFMA
Sbjct: 476 MVWRKLIRNPNTYASLIGLIWSLVSFRWNIKMPTIVSGSISILSDAGLGMAMFSLGLFMA 535

Query: 358 LQPKLIACGKRVATFSMAVRFLTGPAVIAATSIACGLRGVLLHVAIVQAALPQGIVPFVF 537
           LQPK+IACGK VATFSMAVRFLTGPAVIAATSIA G+RGVLLHVAIVQAALPQGIVPFVF
Sbjct: 536 LQPKMIACGKTVATFSMAVRFLTGPAVIAATSIAIGMRGVLLHVAIVQAALPQGIVPFVF 595

Query: 538 AKEYNVHADILSTGVIFGM 594
           AKEYNVHADILST VIFGM
Sbjct: 596 AKEYNVHADILSTAVIFGM 614


>ref|XP_002324677.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222866111|gb|EEF03242.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 633

 Score =  293 bits (751), Expect = 3e-77
 Identities = 152/192 (79%), Positives = 167/192 (86%)
 Frame = +1

Query: 19  EVEIEDGSKFSANGSPYLSQKKVDMEAVXXXXXXXXXXSQMPPASVMTRLILIMVWRKLI 198
           E ++EDG KF  N SP+  QKK+DM A            QMPPASVMTRLILIMVWRKLI
Sbjct: 432 EHDVEDGCKFPQNVSPFTCQKKMDMAA------DGSKKHQMPPASVMTRLILIMVWRKLI 485

Query: 199 RNPNTYSSIIGLIWALVTYRFNIKMPTIVSGSITILSNAGLGMAMFSLGLFMALQPKLIA 378
           RNPNTYSS++G+IW+LV+YR+NIKMP+IVSGSI ILS+AGLGMAMFSLGLFMALQPK+IA
Sbjct: 486 RNPNTYSSLLGVIWSLVSYRWNIKMPSIVSGSIAILSDAGLGMAMFSLGLFMALQPKIIA 545

Query: 379 CGKRVATFSMAVRFLTGPAVIAATSIACGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVH 558
           CGK VATF+MAVRFLTGPAVIAATSIA G+RGVLLHVAIVQAALPQGIVPFVFAKEYNVH
Sbjct: 546 CGKTVATFAMAVRFLTGPAVIAATSIAIGIRGVLLHVAIVQAALPQGIVPFVFAKEYNVH 605

Query: 559 ADILSTGVIFGM 594
            DILST VIFGM
Sbjct: 606 PDILSTAVIFGM 617


>ref|XP_003610026.1| Auxin efflux carrier component [Medicago truncatula]
           gi|28204657|gb|AAM55298.2| auxin efflux carrier protein
           [Medicago truncatula] gi|355511081|gb|AES92223.1| Auxin
           efflux carrier component [Medicago truncatula]
          Length = 625

 Score =  289 bits (740), Expect = 5e-76
 Identities = 151/192 (78%), Positives = 170/192 (88%)
 Frame = +1

Query: 19  EVEIEDGSKFSANGSPYLSQKKVDMEAVXXXXXXXXXXSQMPPASVMTRLILIMVWRKLI 198
           +VEIE+  K     SPY+SQKK+D+E            +QMPPASVMTRLILIMVWRKLI
Sbjct: 427 DVEIEEAVK-----SPYISQKKMDLEG----GGDVSKNTQMPPASVMTRLILIMVWRKLI 477

Query: 199 RNPNTYSSIIGLIWALVTYRFNIKMPTIVSGSITILSNAGLGMAMFSLGLFMALQPKLIA 378
           RNPNTYSS+IGL+W+LV++RF+I+MP+IV GSI+ILS+AGLGMAMFSLGLFMALQPKLIA
Sbjct: 478 RNPNTYSSLIGLVWSLVSFRFHIEMPSIVKGSISILSDAGLGMAMFSLGLFMALQPKLIA 537

Query: 379 CGKRVATFSMAVRFLTGPAVIAATSIACGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVH 558
           CGKRVATFSMAVRFLTGPAVIAATSIA G+RGVLLHVAIVQAALPQGIVPFVFAKEYN+H
Sbjct: 538 CGKRVATFSMAVRFLTGPAVIAATSIAIGIRGVLLHVAIVQAALPQGIVPFVFAKEYNLH 597

Query: 559 ADILSTGVIFGM 594
            +ILSTGVIFGM
Sbjct: 598 PNILSTGVIFGM 609


>ref|XP_002527704.1| Auxin efflux carrier component, putative [Ricinus communis]
           gi|223532935|gb|EEF34703.1| Auxin efflux carrier
           component, putative [Ricinus communis]
          Length = 636

 Score =  286 bits (732), Expect = 4e-75
 Identities = 145/190 (76%), Positives = 167/190 (87%)
 Frame = +1

Query: 25  EIEDGSKFSANGSPYLSQKKVDMEAVXXXXXXXXXXSQMPPASVMTRLILIMVWRKLIRN 204
           +++D  KF+ NGSP+  QKK+DM+             QMPPASVMTRLI+IMVWRKLIRN
Sbjct: 435 DMDDQKKFAPNGSPFSCQKKMDMDM---EGGDGSKKHQMPPASVMTRLIIIMVWRKLIRN 491

Query: 205 PNTYSSIIGLIWALVTYRFNIKMPTIVSGSITILSNAGLGMAMFSLGLFMALQPKLIACG 384
           PNTYSS+ G++W+L++YR++I+MP+IVSGSI+ILS+AGLGMAMFSLGLFMALQPK+IACG
Sbjct: 492 PNTYSSLFGVVWSLISYRWSIQMPSIVSGSISILSDAGLGMAMFSLGLFMALQPKIIACG 551

Query: 385 KRVATFSMAVRFLTGPAVIAATSIACGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHAD 564
           K VATF+MAVRFLTGPAVIAATSIA GLRG LLHVAIVQAALPQGIVPFVFAKEYNVHAD
Sbjct: 552 KSVATFAMAVRFLTGPAVIAATSIAIGLRGPLLHVAIVQAALPQGIVPFVFAKEYNVHAD 611

Query: 565 ILSTGVIFGM 594
           ILST VIFGM
Sbjct: 612 ILSTAVIFGM 621


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