BLASTX nr result

ID: Coptis24_contig00001918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001918
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259...    94   1e-33
emb|CBI29168.3| unnamed protein product [Vitis vinifera]               94   1e-33
ref|XP_002524976.1| Multidrug resistance protein mdtG, putative ...    91   2e-33
ref|XP_002322579.1| predicted protein [Populus trichocarpa] gi|2...    84   3e-33
ref|XP_002277751.1| PREDICTED: protein ZINC INDUCED FACILITATOR-...    87   4e-33

>ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259102 [Vitis vinifera]
          Length = 1624

 Score = 94.4 bits (233), Expect(2) = 1e-33
 Identities = 39/53 (73%), Positives = 48/53 (90%)
 Frame = +2

Query: 2    LKKVYYENCPGCKVDRRKDTLRGVPIKEFFYVWIVVLCNALPISSLFPFLYFM 160
            LKKVY+E CPGC+V+  KDT RG+P+++ F+VWIVVLCNALPISSLFP+LYFM
Sbjct: 1148 LKKVYHEGCPGCRVEHLKDTQRGLPVRQLFFVWIVVLCNALPISSLFPYLYFM 1200



 Score = 73.9 bits (180), Expect(2) = 1e-33
 Identities = 31/43 (72%), Positives = 40/43 (93%)
 Frame = +3

Query: 264  DTHIAKREEDIGFYAGFVGAAFMFGRALTSIMWGVIADRYGRK 392
            D +IAK E+DIG+YAG+ GA++MFGRALTSI+WG++ADRYGRK
Sbjct: 1203 DFNIAKTEKDIGYYAGYAGASYMFGRALTSILWGMVADRYGRK 1245


>emb|CBI29168.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score = 94.4 bits (233), Expect(2) = 1e-33
 Identities = 39/53 (73%), Positives = 48/53 (90%)
 Frame = +2

Query: 2   LKKVYYENCPGCKVDRRKDTLRGVPIKEFFYVWIVVLCNALPISSLFPFLYFM 160
           LKKVY+E CPGC+V+  KDT RG+P+++ F+VWIVVLCNALPISSLFP+LYFM
Sbjct: 42  LKKVYHEGCPGCRVEHLKDTQRGLPVRQLFFVWIVVLCNALPISSLFPYLYFM 94



 Score = 73.9 bits (180), Expect(2) = 1e-33
 Identities = 31/43 (72%), Positives = 40/43 (93%)
 Frame = +3

Query: 264 DTHIAKREEDIGFYAGFVGAAFMFGRALTSIMWGVIADRYGRK 392
           D +IAK E+DIG+YAG+ GA++MFGRALTSI+WG++ADRYGRK
Sbjct: 97  DFNIAKTEKDIGYYAGYAGASYMFGRALTSILWGMVADRYGRK 139


>ref|XP_002524976.1| Multidrug resistance protein mdtG, putative [Ricinus communis]
           gi|223535720|gb|EEF37383.1| Multidrug resistance protein
           mdtG, putative [Ricinus communis]
          Length = 384

 Score = 91.3 bits (225), Expect(2) = 2e-33
 Identities = 41/53 (77%), Positives = 45/53 (84%)
 Frame = +2

Query: 2   LKKVYYENCPGCKVDRRKDTLRGVPIKEFFYVWIVVLCNALPISSLFPFLYFM 160
           LKK YYENCPGCKVD+ K+   G+PIKEF  +WIVVLC ALPISSLFPFLYFM
Sbjct: 9   LKKNYYENCPGCKVDQIKELRTGLPIKEFVSIWIVVLCTALPISSLFPFLYFM 61



 Score = 76.6 bits (187), Expect(2) = 2e-33
 Identities = 32/43 (74%), Positives = 39/43 (90%)
 Frame = +3

Query: 264 DTHIAKREEDIGFYAGFVGAAFMFGRALTSIMWGVIADRYGRK 392
           D HI +REEDIG+YAG+VG+AFM GRALTS+ WGV++DRYGRK
Sbjct: 64  DFHIVEREEDIGYYAGYVGSAFMLGRALTSVFWGVVSDRYGRK 106


>ref|XP_002322579.1| predicted protein [Populus trichocarpa] gi|222867209|gb|EEF04340.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score = 84.0 bits (206), Expect(2) = 3e-33
 Identities = 37/52 (71%), Positives = 41/52 (78%)
 Frame = +2

Query: 5   KKVYYENCPGCKVDRRKDTLRGVPIKEFFYVWIVVLCNALPISSLFPFLYFM 160
           K  YYE+CPGCK++  K+T  GVP K   YVWIVVLC ALPISSLFPFLYFM
Sbjct: 6   KNKYYEDCPGCKIELSKETNTGVPFKYLLYVWIVVLCAALPISSLFPFLYFM 57



 Score = 83.2 bits (204), Expect(2) = 3e-33
 Identities = 36/43 (83%), Positives = 42/43 (97%)
 Frame = +3

Query: 264 DTHIAKREEDIGFYAGFVGAAFMFGRALTSIMWGVIADRYGRK 392
           D HIAKREEDIG+YAG+VG+AFMFGRALTS++WG+IADRYGRK
Sbjct: 60  DFHIAKREEDIGYYAGYVGSAFMFGRALTSVLWGMIADRYGRK 102


>ref|XP_002277751.1| PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1 [Vitis vinifera]
           gi|296085442|emb|CBI29174.3| unnamed protein product
           [Vitis vinifera]
          Length = 487

 Score = 87.0 bits (214), Expect(2) = 4e-33
 Identities = 37/53 (69%), Positives = 45/53 (84%)
 Frame = +2

Query: 2   LKKVYYENCPGCKVDRRKDTLRGVPIKEFFYVWIVVLCNALPISSLFPFLYFM 160
           LKKVYY+NC GC+V++ K+T RG+PI+E   +W VVLC ALPISSLFPFLYFM
Sbjct: 10  LKKVYYQNCSGCRVEQLKETRRGLPIRELLSIWTVVLCTALPISSLFPFLYFM 62



 Score = 79.3 bits (194), Expect(2) = 4e-33
 Identities = 34/43 (79%), Positives = 40/43 (93%)
 Frame = +3

Query: 264 DTHIAKREEDIGFYAGFVGAAFMFGRALTSIMWGVIADRYGRK 392
           D HIAKREEDIG+YAG+VG+AFM GRALTS+ WG++ADRYGRK
Sbjct: 65  DFHIAKREEDIGYYAGYVGSAFMLGRALTSVAWGMVADRYGRK 107