BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001878
         (1441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515364.1| arginine/serine-rich splicing factor, putati...   171   3e-40
ref|XP_002330789.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-40
ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing fac...   166   2e-38
ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing fac...   161   3e-37
gb|ACX54788.2| putative arginine/serine-rich splicing factor [Ar...   161   5e-37

>ref|XP_002515364.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
            gi|223545308|gb|EEF46813.1| arginine/serine-rich splicing
            factor, putative [Ricinus communis]
          Length = 179

 Score =  171 bits (434), Expect = 3e-40
 Identities = 100/196 (51%), Positives = 106/196 (54%)
 Frame = -2

Query: 1323 MSRVYVGNLNPRVTERELEDEFRTFGVLKSVWVARRPPGYAFIDFDDHRDALDAIRDLDG 1144
            MSRVYVGNL+PRVTER+LEDEFR FGV++SVWVARRPPGYAFIDFDD RDA DAI +LDG
Sbjct: 1    MSRVYVGNLDPRVTERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDADDAIHELDG 60

Query: 1143 KNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 964
            KNGWRVELSHN                                DLKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHN---------------SRGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 105

Query: 963  RLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAXXXXXXXXXXXXXXXXXXXXREES 784
            RLRV                                                    REE 
Sbjct: 106  RLRV--GSGRRRSRSPRYRRSPSYGRRSYSPRGRSPKRRSISPRGRSYSRSPPYRGREEL 163

Query: 783  PYANGNGVRDRHRSRS 736
            PYANGNG+RDR RSRS
Sbjct: 164  PYANGNGIRDRRRSRS 179


>ref|XP_002330789.1| predicted protein [Populus trichocarpa] gi|222872591|gb|EEF09722.1|
            predicted protein [Populus trichocarpa]
          Length = 187

 Score =  171 bits (433), Expect = 4e-40
 Identities = 99/197 (50%), Positives = 107/197 (54%), Gaps = 1/197 (0%)
 Frame = -2

Query: 1323 MSRVYVGNLNPRVTERELEDEFRTFGVLKSVWVARRPPGYAFIDFDDHRDALDAIRDLDG 1144
            MSRVYVGNL+PRV+ER+LEDEFR FGV++SVWVARRPPGYAFIDFDD RDA DAI +LDG
Sbjct: 1    MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDG 60

Query: 1143 KNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 964
            KNGWRVELSHN                                DLKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHN----------SRGGGGGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 110

Query: 963  RLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGA-XXXXXXXXXXXXXXXXXXXXREE 787
            RLRV                               +                     REE
Sbjct: 111  RLRVGSGGGGRRRSRSPRYRRSPSYGRRSYSPRGRSPKRRSLSPRGRSYSRSPQYRGREE 170

Query: 786  SPYANGNGVRDRHRSRS 736
             PYANGNG+RDR RSRS
Sbjct: 171  LPYANGNGIRDRRRSRS 187


>ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
            [Vitis vinifera] gi|296083786|emb|CBI24003.3| unnamed
            protein product [Vitis vinifera]
          Length = 181

 Score =  166 bits (419), Expect = 2e-38
 Identities = 84/123 (68%), Positives = 88/123 (71%)
 Frame = -2

Query: 1323 MSRVYVGNLNPRVTERELEDEFRTFGVLKSVWVARRPPGYAFIDFDDHRDALDAIRDLDG 1144
            MSRVYVGNL+PRVTERELEDEFR FGV++SVWVARRPPGYAFIDFDD RDA DAIR+LDG
Sbjct: 1    MSRVYVGNLDPRVTERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60

Query: 1143 KNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 964
            KNGWRVELSHN                                DLKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHN-------------SRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 107

Query: 963  RLR 955
            RLR
Sbjct: 108  RLR 110


>ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
            sativus] gi|449515555|ref|XP_004164814.1| PREDICTED:
            serine/arginine-rich splicing factor RSZ22-like [Cucumis
            sativus]
          Length = 192

 Score =  161 bits (408), Expect = 3e-37
 Identities = 82/123 (66%), Positives = 87/123 (70%)
 Frame = -2

Query: 1323 MSRVYVGNLNPRVTERELEDEFRTFGVLKSVWVARRPPGYAFIDFDDHRDALDAIRDLDG 1144
            MSRVYVGNL+PRV+ERELEDEFR FGV++SVWVARRPPGYAFIDFDD RDA DAI +LDG
Sbjct: 1    MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 1143 KNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 964
            KNGWRVELSHN                                DLKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHN-------------SRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFAREC 107

Query: 963  RLR 955
            RLR
Sbjct: 108  RLR 110


>gb|ACX54788.2| putative arginine/serine-rich splicing factor [Arachis diogoi]
            gi|357018296|gb|AET50931.1| SR-protein [Arachis diogoi]
            gi|414005520|gb|AFW97328.1| SR protein [Arachis diogoi]
          Length = 181

 Score =  161 bits (407), Expect = 5e-37
 Identities = 82/123 (66%), Positives = 87/123 (70%)
 Frame = -2

Query: 1323 MSRVYVGNLNPRVTERELEDEFRTFGVLKSVWVARRPPGYAFIDFDDHRDALDAIRDLDG 1144
            MSRVYVGNL+ RVTER+LEDEFR FGV++SVWVARRPPGYAFIDFDD RDA DAIR+LDG
Sbjct: 1    MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDSRDARDAIRELDG 60

Query: 1143 KNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 964
            KNGWRVELSHN                                DLKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHN--------------SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106

Query: 963  RLR 955
            RLR
Sbjct: 107  RLR 109