BLASTX nr result

ID: Coptis24_contig00001862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001862
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like ...   311   2e-82
ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis...   306   6e-81
emb|CBI37641.3| unnamed protein product [Vitis vinifera]              303   5e-80
ref|XP_002272863.1| PREDICTED: WUSCHEL-related homeobox 13-like ...   301   1e-79
emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]   296   5e-78

>ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like isoform 1 [Vitis
           vinifera]
          Length = 281

 Score =  311 bits (797), Expect = 2e-82
 Identities = 152/251 (60%), Positives = 193/251 (76%), Gaps = 2/251 (0%)
 Frame = +2

Query: 62  NNGMVYVKVMTDEQMELLQKQIAVYTTICEQLVEMHKNVSAQQDLSGVKLGNLYCDSVMT 241
           N G++Y+KVMTD QME+L+KQI+VY TICEQLVEMHK++++ QDL+GV+LGNLYCD +MT
Sbjct: 37  NGGVLYMKVMTDAQMEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMT 96

Query: 242 SAGNKMTSRQRWTPTTAQLQILERIFDEGIGTPSKQKIKEVTNELMQHGQISETNVYNWF 421
           S G+K+T+RQRWTPT  QLQILERIFD+G GTPSKQKIKE+T++L QHGQISETNVYNWF
Sbjct: 97  STGHKITARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWF 156

Query: 422 QNRRARSKRKQMVTPPNSAESEVETEDDFPKEKKTNSENINSNGIMVPRPDEICFQSSEI 601
           QNRRARSKRKQ+VT PN+A+SEVETE + PK+KKT SEN         RP+++CFQ+ E+
Sbjct: 157 QNRRARSKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQNSASRPEDLCFQNPEL 216

Query: 602 NSLSQ--DPRPHTAAIMFPSDGCSKSTGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFTS 775
            S     D + H    +FPSDG  K +G++  + FY      +  D++ GKME  GS+  
Sbjct: 217 GSRLDFLDQQTHKEEAIFPSDGGIKPSGNLSPVAFY------AGNDHQIGKMEVPGSYNP 270

Query: 776 YRQGEDYDMIG 808
           Y+Q EDY M G
Sbjct: 271 YQQTEDYSMSG 281


>ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis vinifera]
           gi|297745565|emb|CBI40730.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  306 bits (784), Expect = 6e-81
 Identities = 156/251 (62%), Positives = 193/251 (76%), Gaps = 3/251 (1%)
 Frame = +2

Query: 65  NGMVYVKVMTDEQMELLQKQIAVYTTICEQLVEMHKNVSAQQDLSGVKLGNLYCDSVMTS 244
           +G +YVKVMTDEQMELL++QI+VY TICEQLVEMHK ++ QQDL+G++LGN+YCD +M S
Sbjct: 29  SGGLYVKVMTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMAS 88

Query: 245 AGNKMTSRQRWTPTTAQLQILERIFDEGIGTPSKQKIKEVTNELMQHGQISETNVYNWFQ 424
           AG+K++SRQRWTPT  QLQILERIFD+G GTPSKQKIKE+T EL QHGQISETNVYNWFQ
Sbjct: 89  AGHKISSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQ 148

Query: 425 NRRARSKRKQMVTPPNSAESEVETEDDFPKEKKTNSENINSNGIMVPRPDEICFQSSEIN 604
           NRRARSKRKQ V  PN+A+SEVET+ + PKEKKT  +NI S+       + I FQS E+ 
Sbjct: 149 NRRARSKRKQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSALGTENIYFQSPEMG 208

Query: 605 SLSQ--DPRPHTAAIMFPSDGCSKSTGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFTSY 778
           S     D +P+    MFPSD   +S+GS+G+   YE+ + N R D   GK+E  GSF+ Y
Sbjct: 209 SEMHCLDTQPNKGEPMFPSDRSLRSSGSLGHSSLYETGVPNPRMDQLIGKVEVPGSFSPY 268

Query: 779 RQ-GEDYDMIG 808
           RQ GE +DM+G
Sbjct: 269 RQGGEGFDMVG 279


>emb|CBI37641.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  303 bits (776), Expect = 5e-80
 Identities = 149/245 (60%), Positives = 188/245 (76%), Gaps = 2/245 (0%)
 Frame = +2

Query: 80  VKVMTDEQMELLQKQIAVYTTICEQLVEMHKNVSAQQDLSGVKLGNLYCDSVMTSAGNKM 259
           +KVMTD QME+L+KQI+VY TICEQLVEMHK++++ QDL+GV+LGNLYCD +MTS G+K+
Sbjct: 1   MKVMTDAQMEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMTSTGHKI 60

Query: 260 TSRQRWTPTTAQLQILERIFDEGIGTPSKQKIKEVTNELMQHGQISETNVYNWFQNRRAR 439
           T+RQRWTPT  QLQILERIFD+G GTPSKQKIKE+T++L QHGQISETNVYNWFQNRRAR
Sbjct: 61  TARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWFQNRRAR 120

Query: 440 SKRKQMVTPPNSAESEVETEDDFPKEKKTNSENINSNGIMVPRPDEICFQSSEINSLSQ- 616
           SKRKQ+VT PN+A+SEVETE + PK+KKT SEN         RP+++CFQ+ E+ S    
Sbjct: 121 SKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQNSASRPEDLCFQNPELGSRLDF 180

Query: 617 -DPRPHTAAIMFPSDGCSKSTGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFTSYRQGED 793
            D + H    +FPSDG  K +G++  + FY      +  D++ GKME  GS+  Y+Q ED
Sbjct: 181 LDQQTHKEEAIFPSDGGIKPSGNLSPVAFY------AGNDHQIGKMEVPGSYNPYQQTED 234

Query: 794 YDMIG 808
           Y M G
Sbjct: 235 YSMSG 239


>ref|XP_002272863.1| PREDICTED: WUSCHEL-related homeobox 13-like [Vitis vinifera]
          Length = 276

 Score =  301 bits (772), Expect = 1e-79
 Identities = 148/251 (58%), Positives = 189/251 (75%), Gaps = 2/251 (0%)
 Frame = +2

Query: 62  NNGMVYVKVMTDEQMELLQKQIAVYTTICEQLVEMHKNVSAQQDLSGVKLGNLYCDSVMT 241
           N G+ YVKVMTD Q+E+L+KQI+VY TICEQLVEMHK++++ QDL+GV+LGNLYCD +MT
Sbjct: 32  NGGVFYVKVMTDAQVEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMT 91

Query: 242 SAGNKMTSRQRWTPTTAQLQILERIFDEGIGTPSKQKIKEVTNELMQHGQISETNVYNWF 421
           S G+K+++RQRWTPT  QLQILERIFD+G GTPSKQKIKE+T++L QHGQISETNVYNWF
Sbjct: 92  STGHKISARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWF 151

Query: 422 QNRRARSKRKQMVTPPNSAESEVETEDDFPKEKKTNSENINSNGIMVPRPDEICFQSSEI 601
           QNRRA+SKRKQ++T PN+AESEV TE + PK++KT SEN         RP+++CFQ+ EI
Sbjct: 152 QNRRAQSKRKQLITMPNNAESEVATEVESPKDQKTKSENFLPQQNSASRPEDLCFQNPEI 211

Query: 602 NSLSQ--DPRPHTAAIMFPSDGCSKSTGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFTS 775
            S     D + H    +FPSDG  K +G+   + FY      +  D++ GKME  GS+  
Sbjct: 212 GSRLHFLDQQTHKEENIFPSDGGIKPSGNPSQVAFY------AGNDHQIGKMEVPGSYNP 265

Query: 776 YRQGEDYDMIG 808
           Y+  EDY M G
Sbjct: 266 YQHTEDYSMTG 276


>emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]
          Length = 243

 Score =  296 bits (759), Expect = 5e-78
 Identities = 151/243 (62%), Positives = 186/243 (76%), Gaps = 3/243 (1%)
 Frame = +2

Query: 89  MTDEQMELLQKQIAVYTTICEQLVEMHKNVSAQQDLSGVKLGNLYCDSVMTSAGNKMTSR 268
           MTDEQMELL++QI+VY TICEQLVEMHK ++ QQDL+G++LGN+YCD +M SAG+K++SR
Sbjct: 1   MTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMASAGHKISSR 60

Query: 269 QRWTPTTAQLQILERIFDEGIGTPSKQKIKEVTNELMQHGQISETNVYNWFQNRRARSKR 448
           QRWTPT  QLQILERIFD+G GTPSKQKIKE+T EL QHGQISETNVYNWFQNRRARSKR
Sbjct: 61  QRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQNRRARSKR 120

Query: 449 KQMVTPPNSAESEVETEDDFPKEKKTNSENINSNGIMVPRPDEICFQSSEINSLSQ--DP 622
           KQ V  PN+A+SEVET+ + PKEKKT  +NI S+       + I FQS E+ S     D 
Sbjct: 121 KQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSALGTENIYFQSPEMGSEMHCLDT 180

Query: 623 RPHTAAIMFPSDGCSKSTGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFTSYRQ-GEDYD 799
           +P+    MFPSD   +S+GS+G+   YE+ + N R D   GK+E  GSF+ YRQ GE +D
Sbjct: 181 QPNKGEPMFPSDHSLRSSGSLGHSSLYEAGVPNPRMDQLIGKVEVPGSFSPYRQGGEGFD 240

Query: 800 MIG 808
           M+G
Sbjct: 241 MVG 243


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